RNA–Protein interactions for RNA: ENST00000465014.6

CBWD1-211, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-211ENST00000465014 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
CBWD1-211ENST00000465014 C3P01024 1663 aa12.11□□□□□ -0.47
CBWD1-211ENST00000465014 CEBPAP49715 358 aaPredicted RBP12.1□□□□□ -0.47
CBWD1-211ENST00000465014 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
CBWD1-211ENST00000465014 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
CBWD1-211ENST00000465014 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
CBWD1-211ENST00000465014 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
CBWD1-211ENST00000465014 EVX2Q03828 476 aa12.09□□□□□ -0.47
CBWD1-211ENST00000465014 MBD5Q9P267 1494 aa12.08□□□□□ -0.47
CBWD1-211ENST00000465014 HSPA2P54652 639 aa12.08□□□□□ -0.48
CBWD1-211ENST00000465014 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
CBWD1-211ENST00000465014 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
CBWD1-211ENST00000465014 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-211ENST00000465014 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
CBWD1-211ENST00000465014 A2MP01023 1474 aa12.06□□□□□ -0.48
CBWD1-211ENST00000465014 CLTCQ00610 1675 aaKnown RBP12.06□□□□□ -0.48
CBWD1-211ENST00000465014 LHX8Q68G74 356 aa12.05□□□□□ -0.48
CBWD1-211ENST00000465014 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
CBWD1-211ENST00000465014 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
CBWD1-211ENST00000465014 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
CBWD1-211ENST00000465014 CCDC141Q6ZP82 1450 aa12.04□□□□□ -0.48
CBWD1-211ENST00000465014 ARHGEF5Q12774 1597 aa12.03□□□□□ -0.48
CBWD1-211ENST00000465014 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.48
CBWD1-211ENST00000465014 PITPNM1O00562 1244 aa12.02□□□□□ -0.49
CBWD1-211ENST00000465014 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
CBWD1-211ENST00000465014 GGT6Q6P531 493 aa12.01□□□□□ -0.49
CBWD1-211ENST00000465014 DISP3Q9P2K9 1392 aa12□□□□□ -0.49
CBWD1-211ENST00000465014 STRCQ7RTU9 1775 aa12□□□□□ -0.49
CBWD1-211ENST00000465014 MYOM3Q5VTT5 1437 aa12□□□□□ -0.49
CBWD1-211ENST00000465014 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
CBWD1-211ENST00000465014 RSPH4AQ5TD94 716 aa11.99□□□□□ -0.49
CBWD1-211ENST00000465014 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
CBWD1-211ENST00000465014 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
CBWD1-211ENST00000465014 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
CBWD1-211ENST00000465014 MAST1Q9Y2H9 1570 aa11.97□□□□□ -0.49
CBWD1-211ENST00000465014 PTPN23Q9H3S7 1636 aa11.97□□□□□ -0.49
CBWD1-211ENST00000465014 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
CBWD1-211ENST00000465014 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
CBWD1-211ENST00000465014 CROCC2H7BZ55 1655 aa11.96□□□□□ -0.49
CBWD1-211ENST00000465014 KIF3BO15066 747 aa11.96□□□□□ -0.5
CBWD1-211ENST00000465014 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
CBWD1-211ENST00000465014 NPATQ14207 1427 aa11.94□□□□□ -0.5
CBWD1-211ENST00000465014 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
CBWD1-211ENST00000465014 CFAP65Q6ZU64 1925 aaKnown RBP11.93□□□□□ -0.5
CBWD1-211ENST00000465014 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
CBWD1-211ENST00000465014 PTPRKQ15262 1439 aa11.93□□□□□ -0.5
CBWD1-211ENST00000465014 KDM5DQ9BY66 1539 aa11.92□□□□□ -0.5
CBWD1-211ENST00000465014 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
CBWD1-211ENST00000465014 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
CBWD1-211ENST00000465014 CAMSAP1Q5T5Y3 1602 aa11.91□□□□□ -0.5
CBWD1-211ENST00000465014 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
CBWD1-211ENST00000465014 FGD6Q6ZV73 1430 aa11.91□□□□□ -0.5
CBWD1-211ENST00000465014 CEP152O94986 1710 aa11.91□□□□□ -0.5
CBWD1-211ENST00000465014 CEP170BQ9Y4F5 1589 aaPredicted RBP11.9□□□□□ -0.5
CBWD1-211ENST00000465014 ABCC5O15440 1437 aa11.9□□□□□ -0.5
CBWD1-211ENST00000465014 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.51
CBWD1-211ENST00000465014 WASHC2CQ9Y4E1 1318 aa11.9□□□□□ -0.51
CBWD1-211ENST00000465014 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
CBWD1-211ENST00000465014 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
CBWD1-211ENST00000465014 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-211ENST00000465014 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
CBWD1-211ENST00000465014 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
CBWD1-211ENST00000465014 DAPK1P53355 1430 aa11.88□□□□□ -0.51
CBWD1-211ENST00000465014 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
CBWD1-211ENST00000465014 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
CBWD1-211ENST00000465014 PZPP20742 1482 aa11.87□□□□□ -0.51
CBWD1-211ENST00000465014 RRP7BPQ9NSQ0 103 aa11.86□□□□□ -0.51
CBWD1-211ENST00000465014 ABCC3O15438 1527 aa11.86□□□□□ -0.51
CBWD1-211ENST00000465014 PTPRTO14522 1441 aa11.86□□□□□ -0.51
CBWD1-211ENST00000465014 TNRQ92752 1358 aa11.85□□□□□ -0.51
CBWD1-211ENST00000465014 KIF15Q9NS87 1388 aa11.85□□□□□ -0.51
CBWD1-211ENST00000465014 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
CBWD1-211ENST00000465014 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
CBWD1-211ENST00000465014 NCKAP5LQ9HCH0 1330 aa11.85□□□□□ -0.51
CBWD1-211ENST00000465014 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
CBWD1-211ENST00000465014 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
CBWD1-211ENST00000465014 FAM50AQ14320 339 aaKnown RBP11.84□□□□□ -0.51
CBWD1-211ENST00000465014 ERBINQ96RT1 1412 aa11.83□□□□□ -0.52
CBWD1-211ENST00000465014 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
CBWD1-211ENST00000465014 DEPDC5O75140 1603 aa11.83□□□□□ -0.52
CBWD1-211ENST00000465014 PLA2R1Q13018 1463 aa11.83□□□□□ -0.52
CBWD1-211ENST00000465014 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
CBWD1-211ENST00000465014 GABBR2O75899 941 aa11.81□□□□□ -0.52
CBWD1-211ENST00000465014 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
CBWD1-211ENST00000465014 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
CBWD1-211ENST00000465014 SPATA31D1Q6ZQQ2 1576 aa11.8□□□□□ -0.52
CBWD1-211ENST00000465014 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
CBWD1-211ENST00000465014 PKD2Q13563 968 aa11.79□□□□□ -0.52
CBWD1-211ENST00000465014 ERVK-7P63135 1459 aa11.79□□□□□ -0.52
CBWD1-211ENST00000465014 NLRP1Q9C000 1473 aa11.79□□□□□ -0.52
CBWD1-211ENST00000465014 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
CBWD1-211ENST00000465014 ADGRL2O95490 1459 aa11.78□□□□□ -0.52
CBWD1-211ENST00000465014 NEURL4Q96JN8 1562 aa11.78□□□□□ -0.52
CBWD1-211ENST00000465014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.53
CBWD1-211ENST00000465014 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.53
CBWD1-211ENST00000465014 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
CBWD1-211ENST00000465014 VWDEQ8N2E2 1590 aa11.76□□□□□ -0.53
CBWD1-211ENST00000465014 KANK1Q14678 1352 aa11.76□□□□□ -0.53
CBWD1-211ENST00000465014 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
CBWD1-211ENST00000465014 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms