RNA–Protein interactions for RNA: ENST00000464981.1

PCDH19-204, Transcript of protocadherin 19, humanhuman

TSL 3

Gene PCDH19, Length 329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-204ENST00000464981 OSBPP22059 807 aa12.52□□□□□ -0.41
PCDH19-204ENST00000464981 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCDH19-204ENST00000464981 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
PCDH19-204ENST00000464981 COL9A1P20849 921 aa12.48□□□□□ -0.41
PCDH19-204ENST00000464981 PTPREP23469 700 aa12.48□□□□□ -0.41
PCDH19-204ENST00000464981 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
PCDH19-204ENST00000464981 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
PCDH19-204ENST00000464981 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
PCDH19-204ENST00000464981 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
PCDH19-204ENST00000464981 MAP3K7O43318 606 aa12.46□□□□□ -0.41
PCDH19-204ENST00000464981 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
PCDH19-204ENST00000464981 CDHR5Q9HBB8 845 aa12.44□□□□□ -0.42
PCDH19-204ENST00000464981 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
PCDH19-204ENST00000464981 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
PCDH19-204ENST00000464981 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
PCDH19-204ENST00000464981 ADGRD1Q6QNK2 874 aa12.41□□□□□ -0.42
PCDH19-204ENST00000464981 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
PCDH19-204ENST00000464981 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
PCDH19-204ENST00000464981 TK2O00142 265 aa12.38□□□□□ -0.43
PCDH19-204ENST00000464981 RBM26Q5T8P6 1007 aaKnown RBP12.36□□□□□ -0.43
PCDH19-204ENST00000464981 SLC4A5Q9BY07 1137 aa12.36□□□□□ -0.43
PCDH19-204ENST00000464981 HRO43593 1189 aa12.35□□□□□ -0.43
PCDH19-204ENST00000464981 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
PCDH19-204ENST00000464981 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
PCDH19-204ENST00000464981 MMRN1Q13201 1228 aa12.31□□□□□ -0.44
PCDH19-204ENST00000464981 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
PCDH19-204ENST00000464981 FAM198AQ9UFP1 575 aa12.3□□□□□ -0.44
PCDH19-204ENST00000464981 BHMG1C9JSJ3 638 aaPredicted RBP12.29□□□□□ -0.44
PCDH19-204ENST00000464981 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
PCDH19-204ENST00000464981 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
PCDH19-204ENST00000464981 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
PCDH19-204ENST00000464981 PTGDRQ13258 359 aa12.28□□□□□ -0.44
PCDH19-204ENST00000464981 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
PCDH19-204ENST00000464981 PRSS12P56730 875 aa12.27□□□□□ -0.45
PCDH19-204ENST00000464981 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
PCDH19-204ENST00000464981 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
PCDH19-204ENST00000464981 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
PCDH19-204ENST00000464981 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
PCDH19-204ENST00000464981 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
PCDH19-204ENST00000464981 GPR37O15354 613 aa12.25□□□□□ -0.45
PCDH19-204ENST00000464981 PADI6Q6TGC4 694 aa12.24□□□□□ -0.45
PCDH19-204ENST00000464981 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
PCDH19-204ENST00000464981 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
PCDH19-204ENST00000464981 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
PCDH19-204ENST00000464981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDH19-204ENST00000464981 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.45
PCDH19-204ENST00000464981 FCHSD2O94868 740 aa12.2□□□□□ -0.46
PCDH19-204ENST00000464981 RNF166Q96A37 237 aaPredicted RBP12.2□□□□□ -0.46
PCDH19-204ENST00000464981 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
PCDH19-204ENST00000464981 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
PCDH19-204ENST00000464981 SMAPO00193 183 aa12.18□□□□□ -0.46
PCDH19-204ENST00000464981 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
PCDH19-204ENST00000464981 FECHP22830 423 aa12.17□□□□□ -0.46
PCDH19-204ENST00000464981 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
PCDH19-204ENST00000464981 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
PCDH19-204ENST00000464981 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
PCDH19-204ENST00000464981 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
PCDH19-204ENST00000464981 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
PCDH19-204ENST00000464981 HIC1Q14526 733 aa12.14□□□□□ -0.47
PCDH19-204ENST00000464981 TATDN2Q93075 761 aa12.14□□□□□ -0.47
PCDH19-204ENST00000464981 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
PCDH19-204ENST00000464981 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
PCDH19-204ENST00000464981 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
PCDH19-204ENST00000464981 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
PCDH19-204ENST00000464981 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
PCDH19-204ENST00000464981 FAM98CQ17RN3 349 aaKnown RBP12.12□□□□□ -0.47
PCDH19-204ENST00000464981 GNPATO15228 680 aa12.11□□□□□ -0.47
PCDH19-204ENST00000464981 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
PCDH19-204ENST00000464981 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
PCDH19-204ENST00000464981 WNT2BQ93097 391 aa12.1□□□□□ -0.47
PCDH19-204ENST00000464981 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
PCDH19-204ENST00000464981 EYA1Q99502 592 aa12.09□□□□□ -0.47
PCDH19-204ENST00000464981 BCANQ96GW7 911 aa12.08□□□□□ -0.48
PCDH19-204ENST00000464981 BCAMP50895 628 aa12.06□□□□□ -0.48
PCDH19-204ENST00000464981 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
PCDH19-204ENST00000464981 ANKK1Q8NFD2 765 aa12.05□□□□□ -0.48
PCDH19-204ENST00000464981 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
PCDH19-204ENST00000464981 ZC3H15Q8WU90 426 aaKnown RBP12.03□□□□□ -0.48
PCDH19-204ENST00000464981 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
PCDH19-204ENST00000464981 PTPN5P54829 565 aa12.01□□□□□ -0.49
PCDH19-204ENST00000464981 PXYLP1Q8TE99 480 aa12.01□□□□□ -0.49
PCDH19-204ENST00000464981 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
PCDH19-204ENST00000464981 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
PCDH19-204ENST00000464981 NLRP7Q8WX94 980 aa11.99□□□□□ -0.49
PCDH19-204ENST00000464981 LRCH3Q96II8 777 aa11.99□□□□□ -0.49
PCDH19-204ENST00000464981 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
PCDH19-204ENST00000464981 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
PCDH19-204ENST00000464981 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
PCDH19-204ENST00000464981 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
PCDH19-204ENST00000464981 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
PCDH19-204ENST00000464981 SWT1Q5T5J6 900 aaKnown RBP11.98□□□□□ -0.49
PCDH19-204ENST00000464981 ZMYND10O75800 440 aa11.97□□□□□ -0.49
PCDH19-204ENST00000464981 OATP04181 439 aa11.96□□□□□ -0.49
PCDH19-204ENST00000464981 DNAJB2P25686 324 aa11.96□□□□□ -0.49
PCDH19-204ENST00000464981 TMEM134Q9H6X4 195 aa11.96□□□□□ -0.49
PCDH19-204ENST00000464981 IRF6O14896 467 aa11.95□□□□□ -0.5
PCDH19-204ENST00000464981 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
PCDH19-204ENST00000464981 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
PCDH19-204ENST00000464981 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
PCDH19-204ENST00000464981 CCDC102AQ96A19 550 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms