RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF4-206ENST00000464976 KDM4FA0A1W2PPD8 638 aa10.22□□□□□ -0.77
RAPGEF4-206ENST00000464976 GNPATO15228 680 aa10.22□□□□□ -0.77
RAPGEF4-206ENST00000464976 HIC1Q14526 733 aa10.22□□□□□ -0.77
RAPGEF4-206ENST00000464976 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
RAPGEF4-206ENST00000464976 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
RAPGEF4-206ENST00000464976 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
RAPGEF4-206ENST00000464976 GPR153Q6NV75 609 aa10.21□□□□□ -0.77
RAPGEF4-206ENST00000464976 FBXW7Q969H0 707 aa10.21□□□□□ -0.77
RAPGEF4-206ENST00000464976 FOSBP53539 338 aa10.2□□□□□ -0.78
RAPGEF4-206ENST00000464976 PTGDRQ13258 359 aa10.2□□□□□ -0.78
RAPGEF4-206ENST00000464976 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
RAPGEF4-206ENST00000464976 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
RAPGEF4-206ENST00000464976 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
RAPGEF4-206ENST00000464976 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF4-206ENST00000464976 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
RAPGEF4-206ENST00000464976 TSR1Q2NL82 804 aaKnown RBP10.18□□□□□ -0.78
RAPGEF4-206ENST00000464976 SPNS2Q8IVW8 549 aa10.18□□□□□ -0.78
RAPGEF4-206ENST00000464976 FECHP22830 423 aa10.17□□□□□ -0.78
RAPGEF4-206ENST00000464976 ZDHHC16Q969W1 377 aa10.17□□□□□ -0.78
RAPGEF4-206ENST00000464976 LHX6Q9UPM6 363 aa10.16□□□□□ -0.78
RAPGEF4-206ENST00000464976 IRF6O14896 467 aa10.15□□□□□ -0.78
RAPGEF4-206ENST00000464976 TRIM66O15016 1216 aa10.15□□□□□ -0.78
RAPGEF4-206ENST00000464976 CCDC102AQ96A19 550 aa10.15□□□□□ -0.78
RAPGEF4-206ENST00000464976 C6orf132Q5T0Z8 1188 aa10.14□□□□□ -0.79
RAPGEF4-206ENST00000464976 NPDC1Q9NQX5 325 aaPredicted RBP10.14□□□□□ -0.79
RAPGEF4-206ENST00000464976 MMRN1Q13201 1228 aa10.13□□□□□ -0.79
RAPGEF4-206ENST00000464976 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
RAPGEF4-206ENST00000464976 PDE4DQ08499 809 aa10.12□□□□□ -0.79
RAPGEF4-206ENST00000464976 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
RAPGEF4-206ENST00000464976 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
RAPGEF4-206ENST00000464976 PSDA5PKW4 1024 aaPredicted RBP10.11□□□□□ -0.79
RAPGEF4-206ENST00000464976 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
RAPGEF4-206ENST00000464976 ERBB3P21860 1342 aa10.1□□□□□ -0.79
RAPGEF4-206ENST00000464976 CERKQ8TCT0 537 aa10.09□□□□□ -0.79
RAPGEF4-206ENST00000464976 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
RAPGEF4-206ENST00000464976 KDM4CQ9H3R0 1056 aa10.07□□□□□ -0.8
RAPGEF4-206ENST00000464976 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
RAPGEF4-206ENST00000464976 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF4-206ENST00000464976 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
RAPGEF4-206ENST00000464976 PTPREP23469 700 aa10.04□□□□□ -0.8
RAPGEF4-206ENST00000464976 PRSS12P56730 875 aa10.03□□□□□ -0.8
RAPGEF4-206ENST00000464976 AMHR2Q16671 573 aa10.03□□□□□ -0.8
RAPGEF4-206ENST00000464976 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
RAPGEF4-206ENST00000464976 COL9A1P20849 921 aa10.02□□□□□ -0.81
RAPGEF4-206ENST00000464976 IL27Q8NEV9 243 aa10.02□□□□□ -0.81
RAPGEF4-206ENST00000464976 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
RAPGEF4-206ENST00000464976 PARP9Q8IXQ6 854 aa10.01□□□□□ -0.81
RAPGEF4-206ENST00000464976 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
RAPGEF4-206ENST00000464976 OATP04181 439 aa10□□□□□ -0.81
RAPGEF4-206ENST00000464976 KCNH8Q96L42 1107 aa10□□□□□ -0.81
RAPGEF4-206ENST00000464976 KCNK17Q96T54 332 aa10□□□□□ -0.81
RAPGEF4-206ENST00000464976 RBM27Q9P2N5 1060 aaKnown RBP10□□□□□ -0.81
RAPGEF4-206ENST00000464976 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
RAPGEF4-206ENST00000464976 ADGRG1Q9Y653 693 aa9.99□□□□□ -0.81
RAPGEF4-206ENST00000464976 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF4-206ENST00000464976 DAXXQ9UER7 740 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF4-206ENST00000464976 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
RAPGEF4-206ENST00000464976 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
RAPGEF4-206ENST00000464976 TTC13Q8NBP0 860 aa9.97□□□□□ -0.81
RAPGEF4-206ENST00000464976 PHOX2BQ99453 314 aa9.97□□□□□ -0.81
RAPGEF4-206ENST00000464976 CLCN1P35523 988 aa9.96□□□□□ -0.82
RAPGEF4-206ENST00000464976 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.82
RAPGEF4-206ENST00000464976 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
RAPGEF4-206ENST00000464976 FAM117AQ9C073 453 aa9.96□□□□□ -0.82
RAPGEF4-206ENST00000464976 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
RAPGEF4-206ENST00000464976 PXYLP1Q8TE99 480 aa9.94□□□□□ -0.82
RAPGEF4-206ENST00000464976 GPCPD1Q9NPB8 672 aa9.94□□□□□ -0.82
RAPGEF4-206ENST00000464976 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
RAPGEF4-206ENST00000464976 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
RAPGEF4-206ENST00000464976 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
RAPGEF4-206ENST00000464976 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
RAPGEF4-206ENST00000464976 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
RAPGEF4-206ENST00000464976 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
RAPGEF4-206ENST00000464976 PSEN2P49810 448 aa9.92□□□□□ -0.82
RAPGEF4-206ENST00000464976 PROX2Q3B8N5 592 aa9.92□□□□□ -0.82
RAPGEF4-206ENST00000464976 NBPF26B4DH59 902 aa9.91□□□□□ -0.82
RAPGEF4-206ENST00000464976 NUDT18Q6ZVK8 323 aa9.91□□□□□ -0.82
RAPGEF4-206ENST00000464976 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
RAPGEF4-206ENST00000464976 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
RAPGEF4-206ENST00000464976 MS4A1P11836 297 aa9.9□□□□□ -0.82
RAPGEF4-206ENST00000464976 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
RAPGEF4-206ENST00000464976 AXIN2Q9Y2T1 843 aa9.9□□□□□ -0.82
RAPGEF4-206ENST00000464976 TATDN2Q93075 761 aa9.89□□□□□ -0.83
RAPGEF4-206ENST00000464976 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
RAPGEF4-206ENST00000464976 SSTR3P32745 418 aaPredicted RBP9.88□□□□□ -0.83
RAPGEF4-206ENST00000464976 EYA1Q99502 592 aa9.88□□□□□ -0.83
RAPGEF4-206ENST00000464976 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
RAPGEF4-206ENST00000464976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.87□□□□□ -0.83
RAPGEF4-206ENST00000464976 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
RAPGEF4-206ENST00000464976 SMAPO00193 183 aa9.87□□□□□ -0.83
RAPGEF4-206ENST00000464976 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
RAPGEF4-206ENST00000464976 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
RAPGEF4-206ENST00000464976 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
RAPGEF4-206ENST00000464976 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
RAPGEF4-206ENST00000464976 PBX2P40425 430 aa9.85□□□□□ -0.83
RAPGEF4-206ENST00000464976 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
RAPGEF4-206ENST00000464976 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
RAPGEF4-206ENST00000464976 DNAJB2P25686 324 aa9.84□□□□□ -0.83
RAPGEF4-206ENST00000464976 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms