RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 WNT2BQ93097 391 aa12.22□□□□□ -0.45
KPNA1-202ENST00000464940 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
KPNA1-202ENST00000464940 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
KPNA1-202ENST00000464940 EVI5O60447 810 aa12.18□□□□□ -0.46
KPNA1-202ENST00000464940 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
KPNA1-202ENST00000464940 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
KPNA1-202ENST00000464940 A0A0G2JS52 829 aa12.17□□□□□ -0.46
KPNA1-202ENST00000464940 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
KPNA1-202ENST00000464940 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
KPNA1-202ENST00000464940 MFSD10Q14728 455 aa12.15□□□□□ -0.46
KPNA1-202ENST00000464940 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
KPNA1-202ENST00000464940 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
KPNA1-202ENST00000464940 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
KPNA1-202ENST00000464940 PPP1R3GB7ZBB8 358 aa12.09□□□□□ -0.47
KPNA1-202ENST00000464940 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
KPNA1-202ENST00000464940 ANKK1Q8NFD2 765 aa12.05□□□□□ -0.48
KPNA1-202ENST00000464940 PCDHGA10Q9Y5H3 936 aa12.05□□□□□ -0.48
KPNA1-202ENST00000464940 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
KPNA1-202ENST00000464940 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
KPNA1-202ENST00000464940 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
KPNA1-202ENST00000464940 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
KPNA1-202ENST00000464940 E2F4Q16254 413 aa12.02□□□□□ -0.49
KPNA1-202ENST00000464940 COL9A1P20849 921 aa12.01□□□□□ -0.49
KPNA1-202ENST00000464940 LAPTM4BQ86VI4 370 aa12.01□□□□□ -0.49
KPNA1-202ENST00000464940 FBXW7Q969H0 707 aa12.01□□□□□ -0.49
KPNA1-202ENST00000464940 PHF14O94880 888 aa11.99□□□□□ -0.49
KPNA1-202ENST00000464940 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
KPNA1-202ENST00000464940 BCAMP50895 628 aa11.98□□□□□ -0.49
KPNA1-202ENST00000464940 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
KPNA1-202ENST00000464940 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
KPNA1-202ENST00000464940 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
KPNA1-202ENST00000464940 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
KPNA1-202ENST00000464940 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
KPNA1-202ENST00000464940 KIAA1468Q9P260 1216 aa11.95□□□□□ -0.5
KPNA1-202ENST00000464940 ARIH1Q9Y4X5 557 aaPredicted RBP11.94□□□□□ -0.5
KPNA1-202ENST00000464940 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
KPNA1-202ENST00000464940 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
KPNA1-202ENST00000464940 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
KPNA1-202ENST00000464940 TIMELESSQ9UNS1 1208 aa11.92□□□□□ -0.5
KPNA1-202ENST00000464940 ERICH6Q7L0X2 663 aa11.91□□□□□ -0.5
KPNA1-202ENST00000464940 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
KPNA1-202ENST00000464940 KCNC4Q03721 635 aa11.9□□□□□ -0.5
KPNA1-202ENST00000464940 C6orf132Q5T0Z8 1188 aa11.9□□□□□ -0.5
KPNA1-202ENST00000464940 EPAS1Q99814 870 aa11.9□□□□□ -0.5
KPNA1-202ENST00000464940 WBP1LQ9NX94 342 aa11.9□□□□□ -0.5
KPNA1-202ENST00000464940 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
KPNA1-202ENST00000464940 Q6ZNB5 142 aa11.87□□□□□ -0.51
KPNA1-202ENST00000464940 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
KPNA1-202ENST00000464940 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
KPNA1-202ENST00000464940 DPYSL4O14531 572 aa11.85□□□□□ -0.51
KPNA1-202ENST00000464940 FAM98CQ17RN3 349 aaKnown RBP11.85□□□□□ -0.51
KPNA1-202ENST00000464940 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
KPNA1-202ENST00000464940 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
KPNA1-202ENST00000464940 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
KPNA1-202ENST00000464940 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
KPNA1-202ENST00000464940 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
KPNA1-202ENST00000464940 TMEM132AQ24JP5 1023 aa11.8□□□□□ -0.52
KPNA1-202ENST00000464940 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
KPNA1-202ENST00000464940 LAPTM4AQ15012 233 aa11.78□□□□□ -0.52
KPNA1-202ENST00000464940 PDIA6Q15084 440 aa11.78□□□□□ -0.52
KPNA1-202ENST00000464940 DDX12PQ92771 950 aa11.76□□□□□ -0.53
KPNA1-202ENST00000464940 ABCC9O60706 1549 aa11.76□□□□□ -0.53
KPNA1-202ENST00000464940 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
KPNA1-202ENST00000464940 PPP4CP60510 307 aa11.73□□□□□ -0.53
KPNA1-202ENST00000464940 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
KPNA1-202ENST00000464940 ARXQ96QS3 562 aa11.72□□□□□ -0.53
KPNA1-202ENST00000464940 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
KPNA1-202ENST00000464940 SEMA3EO15041 775 aa11.7□□□□□ -0.54
KPNA1-202ENST00000464940 MAP3K7O43318 606 aa11.7□□□□□ -0.54
KPNA1-202ENST00000464940 GFRA3O60609 400 aa11.7□□□□□ -0.54
KPNA1-202ENST00000464940 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
KPNA1-202ENST00000464940 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
KPNA1-202ENST00000464940 TJAP1Q5JTD0 557 aa11.67□□□□□ -0.54
KPNA1-202ENST00000464940 LCE2BO14633 110 aa11.66□□□□□ -0.54
KPNA1-202ENST00000464940 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
KPNA1-202ENST00000464940 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
KPNA1-202ENST00000464940 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
KPNA1-202ENST00000464940 PRKD2Q9BZL6 878 aa11.64□□□□□ -0.55
KPNA1-202ENST00000464940 SMAPO00193 183 aa11.63□□□□□ -0.55
KPNA1-202ENST00000464940 MLLT3P42568 568 aaPredicted RBP11.63□□□□□ -0.55
KPNA1-202ENST00000464940 PRSS12P56730 875 aa11.63□□□□□ -0.55
KPNA1-202ENST00000464940 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
KPNA1-202ENST00000464940 GRXCR2A6NFK2 248 aa11.62□□□□□ -0.55
KPNA1-202ENST00000464940 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
KPNA1-202ENST00000464940 MTRQ99707 1265 aa11.62□□□□□ -0.55
KPNA1-202ENST00000464940 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
KPNA1-202ENST00000464940 NRG2O14511 850 aaPredicted RBP11.6□□□□□ -0.55
KPNA1-202ENST00000464940 PPP1R18Q6NYC8 613 aa11.6□□□□□ -0.55
KPNA1-202ENST00000464940 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
KPNA1-202ENST00000464940 OSBPP22059 807 aa11.59□□□□□ -0.55
KPNA1-202ENST00000464940 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
KPNA1-202ENST00000464940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
KPNA1-202ENST00000464940 C14orf37Q86TY3 774 aa11.59□□□□□ -0.55
KPNA1-202ENST00000464940 TATDN2Q93075 761 aa11.59□□□□□ -0.55
KPNA1-202ENST00000464940 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
KPNA1-202ENST00000464940 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
KPNA1-202ENST00000464940 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
KPNA1-202ENST00000464940 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
KPNA1-202ENST00000464940 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
KPNA1-202ENST00000464940 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms