RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
PRKD3-206ENST00000464552 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
PRKD3-206ENST00000464552 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
PRKD3-206ENST00000464552 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
PRKD3-206ENST00000464552 TK2O00142 265 aa11.07□□□□□ -0.64
PRKD3-206ENST00000464552 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
PRKD3-206ENST00000464552 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
PRKD3-206ENST00000464552 SLC4A5Q9BY07 1137 aa11.07□□□□□ -0.64
PRKD3-206ENST00000464552 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
PRKD3-206ENST00000464552 MAP3K7O43318 606 aa11.06□□□□□ -0.64
PRKD3-206ENST00000464552 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
PRKD3-206ENST00000464552 PRIM1P49642 420 aaKnown RBP11.05□□□□□ -0.64
PRKD3-206ENST00000464552 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
PRKD3-206ENST00000464552 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
PRKD3-206ENST00000464552 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
PRKD3-206ENST00000464552 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
PRKD3-206ENST00000464552 COL9A1P20849 921 aa11.02□□□□□ -0.65
PRKD3-206ENST00000464552 TSR1Q2NL82 804 aaKnown RBP11.02□□□□□ -0.65
PRKD3-206ENST00000464552 VPS9D1Q9Y2B5 631 aa11.01□□□□□ -0.65
PRKD3-206ENST00000464552 CERKQ8TCT0 537 aa11□□□□□ -0.65
PRKD3-206ENST00000464552 HRO43593 1189 aa10.98□□□□□ -0.65
PRKD3-206ENST00000464552 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
PRKD3-206ENST00000464552 CDHR5Q9HBB8 845 aa10.95□□□□□ -0.66
PRKD3-206ENST00000464552 BHMG1C9JSJ3 638 aaPredicted RBP10.94□□□□□ -0.66
PRKD3-206ENST00000464552 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
PRKD3-206ENST00000464552 RABGEF1Q9UJ41 708 aa10.94□□□□□ -0.66
PRKD3-206ENST00000464552 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
PRKD3-206ENST00000464552 PROX2Q3B8N5 592 aa10.93□□□□□ -0.66
PRKD3-206ENST00000464552 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
PRKD3-206ENST00000464552 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
PRKD3-206ENST00000464552 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
PRKD3-206ENST00000464552 TULP1O00294 542 aaPredicted RBP10.92□□□□□ -0.66
PRKD3-206ENST00000464552 PRSS12P56730 875 aa10.92□□□□□ -0.66
PRKD3-206ENST00000464552 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
PRKD3-206ENST00000464552 CDCA7LQ96GN5 454 aa10.91□□□□□ -0.66
PRKD3-206ENST00000464552 STAC3Q96MF2 364 aa10.91□□□□□ -0.66
PRKD3-206ENST00000464552 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
PRKD3-206ENST00000464552 PTGDRQ13258 359 aa10.9□□□□□ -0.66
PRKD3-206ENST00000464552 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
PRKD3-206ENST00000464552 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
PRKD3-206ENST00000464552 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
PRKD3-206ENST00000464552 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
PRKD3-206ENST00000464552 PACS2Q86VP3 889 aa10.88□□□□□ -0.67
PRKD3-206ENST00000464552 FCHSD2O94868 740 aa10.87□□□□□ -0.67
PRKD3-206ENST00000464552 MRPL50Q8N5N7 158 aaKnown RBP10.87□□□□□ -0.67
PRKD3-206ENST00000464552 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
PRKD3-206ENST00000464552 LAPTM4BQ86VI4 370 aa10.86□□□□□ -0.67
PRKD3-206ENST00000464552 TTC13Q8NBP0 860 aa10.86□□□□□ -0.67
PRKD3-206ENST00000464552 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
PRKD3-206ENST00000464552 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
PRKD3-206ENST00000464552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
PRKD3-206ENST00000464552 HIC1Q14526 733 aa10.82□□□□□ -0.68
PRKD3-206ENST00000464552 GPIHBP1Q8IV16 184 aa10.82□□□□□ -0.68
PRKD3-206ENST00000464552 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
PRKD3-206ENST00000464552 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
PRKD3-206ENST00000464552 GPR37O15354 613 aa10.8□□□□□ -0.68
PRKD3-206ENST00000464552 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
PRKD3-206ENST00000464552 TATDN2Q93075 761 aa10.8□□□□□ -0.68
PRKD3-206ENST00000464552 SEPT9Q9UHD8 586 aaPredicted RBP10.79□□□□□ -0.68
PRKD3-206ENST00000464552 GNPATO15228 680 aa10.78□□□□□ -0.68
PRKD3-206ENST00000464552 PNMA3Q9UL41 463 aa10.78□□□□□ -0.68
PRKD3-206ENST00000464552 NUDT18Q6ZVK8 323 aa10.77□□□□□ -0.69
PRKD3-206ENST00000464552 WNT2BQ93097 391 aa10.77□□□□□ -0.69
PRKD3-206ENST00000464552 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
PRKD3-206ENST00000464552 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
PRKD3-206ENST00000464552 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
PRKD3-206ENST00000464552 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
PRKD3-206ENST00000464552 BCANQ96GW7 911 aa10.76□□□□□ -0.69
PRKD3-206ENST00000464552 SMAPO00193 183 aa10.75□□□□□ -0.69
PRKD3-206ENST00000464552 ANKK1Q8NFD2 765 aa10.74□□□□□ -0.69
PRKD3-206ENST00000464552 EYA1Q99502 592 aa10.74□□□□□ -0.69
PRKD3-206ENST00000464552 ADGRG1Q9Y653 693 aa10.74□□□□□ -0.69
PRKD3-206ENST00000464552 THSD4Q6ZMP0 1018 aa10.73□□□□□ -0.69
PRKD3-206ENST00000464552 HCSTQ9UBK5 93 aa10.72□□□□□ -0.69
PRKD3-206ENST00000464552 FECHP22830 423 aa10.71□□□□□ -0.69
PRKD3-206ENST00000464552 RBM46Q8TBY0 533 aaKnown RBP10.71□□□□□ -0.69
PRKD3-206ENST00000464552 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
PRKD3-206ENST00000464552 OATP04181 439 aa10.7□□□□□ -0.7
PRKD3-206ENST00000464552 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
PRKD3-206ENST00000464552 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
PRKD3-206ENST00000464552 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
PRKD3-206ENST00000464552 SAMD7Q7Z3H4 446 aa10.67□□□□□ -0.7
PRKD3-206ENST00000464552 BCAMP50895 628 aa10.66□□□□□ -0.7
PRKD3-206ENST00000464552 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
PRKD3-206ENST00000464552 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
PRKD3-206ENST00000464552 DNAJB2P25686 324 aa10.65□□□□□ -0.7
PRKD3-206ENST00000464552 PTPN5P54829 565 aa10.65□□□□□ -0.7
PRKD3-206ENST00000464552 MAP2K5Q13163 448 aa10.65□□□□□ -0.7
PRKD3-206ENST00000464552 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.7
PRKD3-206ENST00000464552 ZC3H15Q8WU90 426 aaKnown RBP10.65□□□□□ -0.7
PRKD3-206ENST00000464552 MINK1Q8N4C8 1332 aaPredicted RBP10.64□□□□□ -0.71
PRKD3-206ENST00000464552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.64□□□□□ -0.71
PRKD3-206ENST00000464552 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
PRKD3-206ENST00000464552 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
PRKD3-206ENST00000464552 TSR3Q9UJK0 312 aaKnown RBP10.63□□□□□ -0.71
PRKD3-206ENST00000464552 ZMYND10O75800 440 aa10.62□□□□□ -0.71
PRKD3-206ENST00000464552 SWT1Q5T5J6 900 aaKnown RBP10.62□□□□□ -0.71
PRKD3-206ENST00000464552 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
PRKD3-206ENST00000464552 IRF6O14896 467 aa10.61□□□□□ -0.71
PRKD3-206ENST00000464552 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms