RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
USP25-207ENST00000464435 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
USP25-207ENST00000464435 PTPREP23469 700 aa11.22□□□□□ -0.61
USP25-207ENST00000464435 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
USP25-207ENST00000464435 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
USP25-207ENST00000464435 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
USP25-207ENST00000464435 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
USP25-207ENST00000464435 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
USP25-207ENST00000464435 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
USP25-207ENST00000464435 DDX12PQ92771 950 aa11.16□□□□□ -0.62
USP25-207ENST00000464435 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
USP25-207ENST00000464435 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.62
USP25-207ENST00000464435 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
USP25-207ENST00000464435 PTPN5P54829 565 aa11.12□□□□□ -0.63
USP25-207ENST00000464435 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
USP25-207ENST00000464435 NBR1Q14596 966 aa11.12□□□□□ -0.63
USP25-207ENST00000464435 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
USP25-207ENST00000464435 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
USP25-207ENST00000464435 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
USP25-207ENST00000464435 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
USP25-207ENST00000464435 OSBPP22059 807 aa11.08□□□□□ -0.64
USP25-207ENST00000464435 CERKQ8TCT0 537 aa11.08□□□□□ -0.64
USP25-207ENST00000464435 MAP3K7O43318 606 aa11.07□□□□□ -0.64
USP25-207ENST00000464435 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
USP25-207ENST00000464435 BHMG1C9JSJ3 638 aaPredicted RBP11.05□□□□□ -0.64
USP25-207ENST00000464435 COL9A1P20849 921 aa11.04□□□□□ -0.64
USP25-207ENST00000464435 THSD4Q6ZMP0 1018 aa11.04□□□□□ -0.64
USP25-207ENST00000464435 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
USP25-207ENST00000464435 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
USP25-207ENST00000464435 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
USP25-207ENST00000464435 SMYD5Q6GMV2 418 aa11.01□□□□□ -0.65
USP25-207ENST00000464435 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
USP25-207ENST00000464435 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
USP25-207ENST00000464435 BCANQ96GW7 911 aa11□□□□□ -0.65
USP25-207ENST00000464435 SEMA3EO15041 775 aa10.99□□□□□ -0.65
USP25-207ENST00000464435 RGS20O76081 388 aa10.99□□□□□ -0.65
USP25-207ENST00000464435 WNT2BQ93097 391 aa10.99□□□□□ -0.65
USP25-207ENST00000464435 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
USP25-207ENST00000464435 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
USP25-207ENST00000464435 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
USP25-207ENST00000464435 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
USP25-207ENST00000464435 PRIM1P49642 420 aaKnown RBP10.98□□□□□ -0.65
USP25-207ENST00000464435 MRPL50Q8N5N7 158 aaKnown RBP10.98□□□□□ -0.65
USP25-207ENST00000464435 LAPTM4BQ86VI4 370 aa10.97□□□□□ -0.65
USP25-207ENST00000464435 A0A0G2JS52 829 aa10.96□□□□□ -0.65
USP25-207ENST00000464435 PROX2Q3B8N5 592 aa10.96□□□□□ -0.65
USP25-207ENST00000464435 PRSS12P56730 875 aa10.95□□□□□ -0.66
USP25-207ENST00000464435 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
USP25-207ENST00000464435 KIAA1468Q9P260 1216 aa10.94□□□□□ -0.66
USP25-207ENST00000464435 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
USP25-207ENST00000464435 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
USP25-207ENST00000464435 CDHR5Q9HBB8 845 aa10.91□□□□□ -0.66
USP25-207ENST00000464435 NPDC1Q9NQX5 325 aaPredicted RBP10.91□□□□□ -0.66
USP25-207ENST00000464435 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
USP25-207ENST00000464435 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
USP25-207ENST00000464435 FAM98CQ17RN3 349 aaKnown RBP10.88□□□□□ -0.67
USP25-207ENST00000464435 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
USP25-207ENST00000464435 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
USP25-207ENST00000464435 PTGDRQ13258 359 aa10.87□□□□□ -0.67
USP25-207ENST00000464435 NUTM2FA1L443 756 aa10.86□□□□□ -0.67
USP25-207ENST00000464435 FCHSD2O94868 740 aa10.86□□□□□ -0.67
USP25-207ENST00000464435 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
USP25-207ENST00000464435 TATDN2Q93075 761 aa10.84□□□□□ -0.67
USP25-207ENST00000464435 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
USP25-207ENST00000464435 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
USP25-207ENST00000464435 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
USP25-207ENST00000464435 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
USP25-207ENST00000464435 PRKCSHP14314 528 aaPredicted RBP10.81□□□□□ -0.68
USP25-207ENST00000464435 BCAMP50895 628 aa10.81□□□□□ -0.68
USP25-207ENST00000464435 HIC1Q14526 733 aa10.81□□□□□ -0.68
USP25-207ENST00000464435 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
USP25-207ENST00000464435 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
USP25-207ENST00000464435 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
USP25-207ENST00000464435 SOWAHBA6NEL2 793 aa10.79□□□□□ -0.68
USP25-207ENST00000464435 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
USP25-207ENST00000464435 NYAP1Q6ZVC0 841 aa10.78□□□□□ -0.68
USP25-207ENST00000464435 NUDT18Q6ZVK8 323 aa10.78□□□□□ -0.68
USP25-207ENST00000464435 LRCH3Q96II8 777 aa10.77□□□□□ -0.69
USP25-207ENST00000464435 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.76□□□□□ -0.69
USP25-207ENST00000464435 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
USP25-207ENST00000464435 EYA1Q99502 592 aa10.75□□□□□ -0.69
USP25-207ENST00000464435 SMAPO00193 183 aa10.74□□□□□ -0.69
USP25-207ENST00000464435 GNPATO15228 680 aa10.74□□□□□ -0.69
USP25-207ENST00000464435 GPIHBP1Q8IV16 184 aa10.74□□□□□ -0.69
USP25-207ENST00000464435 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
USP25-207ENST00000464435 OATP04181 439 aa10.73□□□□□ -0.69
USP25-207ENST00000464435 WBP1LQ9NX94 342 aa10.73□□□□□ -0.69
USP25-207ENST00000464435 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
USP25-207ENST00000464435 ADGRG1Q9Y653 693 aa10.73□□□□□ -0.69
USP25-207ENST00000464435 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
USP25-207ENST00000464435 GPR37O15354 613 aa10.72□□□□□ -0.69
USP25-207ENST00000464435 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
USP25-207ENST00000464435 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
USP25-207ENST00000464435 Q6ZNB5 142 aa10.7□□□□□ -0.7
USP25-207ENST00000464435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP25-207ENST00000464435 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
USP25-207ENST00000464435 DNAJB2P25686 324 aa10.69□□□□□ -0.7
USP25-207ENST00000464435 KCNC4Q03721 635 aa10.69□□□□□ -0.7
USP25-207ENST00000464435 SLF2Q8IX21 1173 aa10.68□□□□□ -0.7
USP25-207ENST00000464435 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms