RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 ASXL2Q76L83 1435 aa24.37■■□□□ 1.49
LMO2-204ENST00000464025 SPAG9O60271 1321 aaKnown RBP24.36■■□□□ 1.49
LMO2-204ENST00000464025 USP47Q96K76 1375 aa24.36■■□□□ 1.49
LMO2-204ENST00000464025 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
LMO2-204ENST00000464025 DEPDC5O75140 1603 aa24.35■■□□□ 1.49
LMO2-204ENST00000464025 KIF7Q2M1P5 1343 aa24.33■■□□□ 1.48
LMO2-204ENST00000464025 ATP7AQ04656 1500 aa24.31■■□□□ 1.48
LMO2-204ENST00000464025 BCORL1Q5H9F3 1711 aa24.3■■□□□ 1.48
LMO2-204ENST00000464025 EIF2AK4Q9P2K8 1649 aaKnown RBP24.29■■□□□ 1.48
LMO2-204ENST00000464025 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
LMO2-204ENST00000464025 ADGRL1O94910 1474 aa24.28■■□□□ 1.48
LMO2-204ENST00000464025 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
LMO2-204ENST00000464025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.48
LMO2-204ENST00000464025 PRAG1Q86YV5 1406 aa24.27■■□□□ 1.48
LMO2-204ENST00000464025 LAMC1P11047 1609 aa24.27■■□□□ 1.48
LMO2-204ENST00000464025 DCAF11Q8TEB1 546 aa24.26■■□□□ 1.47
LMO2-204ENST00000464025 VWDEQ8N2E2 1590 aa24.25■■□□□ 1.47
LMO2-204ENST00000464025 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
LMO2-204ENST00000464025 SCAPERQ9BY12 1400 aa24.25■■□□□ 1.47
LMO2-204ENST00000464025 NPM1P06748 294 aaKnown RBP eCLIP24.25■■□□□ 1.47
LMO2-204ENST00000464025 E9PCH4 1651 aa24.24■■□□□ 1.47
LMO2-204ENST00000464025 A2MP01023 1474 aa24.24■■□□□ 1.47
LMO2-204ENST00000464025 ZNF326Q5BKZ1 582 aaKnown RBP24.24■■□□□ 1.47
LMO2-204ENST00000464025 ROCK2O75116 1388 aaKnown RBP24.23■■□□□ 1.47
LMO2-204ENST00000464025 GPRASP1Q5JY77 1395 aa24.23■■□□□ 1.47
LMO2-204ENST00000464025 TET3O43151 1660 aa24.23■■□□□ 1.47
LMO2-204ENST00000464025 CARD11Q9BXL7 1154 aa24.23■■□□□ 1.47
LMO2-204ENST00000464025 PRKRIP1Q9H875 184 aaPredicted RBP24.22■■□□□ 1.47
LMO2-204ENST00000464025 PTPRTO14522 1441 aa24.21■■□□□ 1.47
LMO2-204ENST00000464025 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.46
LMO2-204ENST00000464025 TRPM2O94759 1503 aa24.2■■□□□ 1.46
LMO2-204ENST00000464025 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
LMO2-204ENST00000464025 KDM2AQ9Y2K7 1162 aa24.18■■□□□ 1.46
LMO2-204ENST00000464025 KIDINS220Q9ULH0 1771 aa24.18■■□□□ 1.46
LMO2-204ENST00000464025 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
LMO2-204ENST00000464025 PRDM15P57071 1507 aaPredicted RBP24.18■■□□□ 1.46
LMO2-204ENST00000464025 NEURL4Q96JN8 1562 aa24.17■■□□□ 1.46
LMO2-204ENST00000464025 STAC3Q96MF2 364 aa24.16■■□□□ 1.46
LMO2-204ENST00000464025 CEP152O94986 1710 aa24.16■■□□□ 1.46
LMO2-204ENST00000464025 KANK1Q14678 1352 aa24.16■■□□□ 1.46
LMO2-204ENST00000464025 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.45
LMO2-204ENST00000464025 CD109Q6YHK3 1445 aa24.13■■□□□ 1.45
LMO2-204ENST00000464025 MLH3Q9UHC1 1453 aa24.1■■□□□ 1.45
LMO2-204ENST00000464025 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
LMO2-204ENST00000464025 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
LMO2-204ENST00000464025 LMTK2Q8IWU2 1503 aa24.09■■□□□ 1.45
LMO2-204ENST00000464025 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
LMO2-204ENST00000464025 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.44
LMO2-204ENST00000464025 CLTCL1P53675 1640 aa24.07■■□□□ 1.44
LMO2-204ENST00000464025 SUPT16HQ9Y5B9 1047 aaKnown RBP24.07■■□□□ 1.44
LMO2-204ENST00000464025 NEO1Q92859 1461 aa24.06■■□□□ 1.44
LMO2-204ENST00000464025 KIF3BO15066 747 aa24.04■■□□□ 1.44
LMO2-204ENST00000464025 MADDQ8WXG6 1647 aa24.04■■□□□ 1.44
LMO2-204ENST00000464025 HECW2Q9P2P5 1572 aa24.03■■□□□ 1.44
LMO2-204ENST00000464025 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
LMO2-204ENST00000464025 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
LMO2-204ENST00000464025 NBPF1Q3BBV0 1214 aa24.02■■□□□ 1.44
LMO2-204ENST00000464025 PELP1Q8IZL8 1130 aaKnown RBP24.01■■□□□ 1.43
LMO2-204ENST00000464025 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
LMO2-204ENST00000464025 CCDC184Q52MB2 194 aa23.99■■□□□ 1.43
LMO2-204ENST00000464025 COL17A1Q9UMD9 1497 aaPredicted RBP23.99■■□□□ 1.43
LMO2-204ENST00000464025 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
LMO2-204ENST00000464025 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
LMO2-204ENST00000464025 FRMPD1Q5SYB0 1578 aa23.97■■□□□ 1.43
LMO2-204ENST00000464025 HNRNPUQ00839 825 aaKnown RBP eCLIP23.97■■□□□ 1.43
LMO2-204ENST00000464025 GLI2P10070 1586 aa23.97■■□□□ 1.43
LMO2-204ENST00000464025 IQGAP1P46940 1657 aa23.96■■□□□ 1.43
LMO2-204ENST00000464025 KIF1BO60333 1816 aa23.96■■□□□ 1.43
LMO2-204ENST00000464025 MAP3K4Q9Y6R4 1608 aa23.96■■□□□ 1.43
LMO2-204ENST00000464025 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
LMO2-204ENST00000464025 TESK2Q96S53 571 aa23.95■■□□□ 1.43
LMO2-204ENST00000464025 MYOM2P54296 1465 aa23.92■■□□□ 1.42
LMO2-204ENST00000464025 ABCA6Q8N139 1617 aa23.92■■□□□ 1.42
LMO2-204ENST00000464025 POLR3GLQ9BT43 218 aa23.91■■□□□ 1.42
LMO2-204ENST00000464025 IFT172Q9UG01 1749 aa23.91■■□□□ 1.42
LMO2-204ENST00000464025 WASHC2CQ9Y4E1 1318 aa23.9■■□□□ 1.42
LMO2-204ENST00000464025 RALBP1Q15311 655 aa23.9■■□□□ 1.42
LMO2-204ENST00000464025 RICTORQ6R327 1708 aa23.89■■□□□ 1.42
LMO2-204ENST00000464025 ZBED9Q6R2W3 1325 aa23.88■■□□□ 1.41
LMO2-204ENST00000464025 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
LMO2-204ENST00000464025 TMF1P82094 1093 aa23.86■■□□□ 1.41
LMO2-204ENST00000464025 FAM9BQ8IZU0 186 aa23.85■■□□□ 1.41
LMO2-204ENST00000464025 DIP2CQ9Y2E4 1556 aa23.84■■□□□ 1.41
LMO2-204ENST00000464025 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
LMO2-204ENST00000464025 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
LMO2-204ENST00000464025 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
LMO2-204ENST00000464025 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
LMO2-204ENST00000464025 NEFLP07196 543 aa23.83■■□□□ 1.41
LMO2-204ENST00000464025 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.41
LMO2-204ENST00000464025 ABCC3O15438 1527 aa23.82■■□□□ 1.4
LMO2-204ENST00000464025 ADGRB3O60242 1522 aa23.82■■□□□ 1.4
LMO2-204ENST00000464025 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
LMO2-204ENST00000464025 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
LMO2-204ENST00000464025 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
LMO2-204ENST00000464025 PARD3Q8TEW0 1356 aa23.81■■□□□ 1.4
LMO2-204ENST00000464025 MROH2AA6NES4 1674 aa23.81■■□□□ 1.4
LMO2-204ENST00000464025 NPATQ14207 1427 aa23.81■■□□□ 1.4
LMO2-204ENST00000464025 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
LMO2-204ENST00000464025 FKBP8Q14318 412 aa23.8■■□□□ 1.4
LMO2-204ENST00000464025 SLC24A1O60721 1099 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms