RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 AGLP35573 1532 aa11.84□□□□□ -0.51
NCBP2-209ENST00000463783 ARHGAP5Q13017 1502 aa11.84□□□□□ -0.51
NCBP2-209ENST00000463783 TONSLQ96HA7 1378 aa11.83□□□□□ -0.51
NCBP2-209ENST00000463783 CD109Q6YHK3 1445 aa11.83□□□□□ -0.52
NCBP2-209ENST00000463783 ZNF644Q9H582 1327 aaPredicted RBP11.82□□□□□ -0.52
NCBP2-209ENST00000463783 C3P01024 1663 aa11.82□□□□□ -0.52
NCBP2-209ENST00000463783 RTEL1-TNFRSF6BF6WH68 1400 aa11.82□□□□□ -0.52
NCBP2-209ENST00000463783 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
NCBP2-209ENST00000463783 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
NCBP2-209ENST00000463783 MYO5BQ9ULV0 1848 aa11.82□□□□□ -0.52
NCBP2-209ENST00000463783 IRX6P78412 446 aaPredicted RBP11.81□□□□□ -0.52
NCBP2-209ENST00000463783 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
NCBP2-209ENST00000463783 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
NCBP2-209ENST00000463783 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
NCBP2-209ENST00000463783 CCDC141Q6ZP82 1450 aa11.81□□□□□ -0.52
NCBP2-209ENST00000463783 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
NCBP2-209ENST00000463783 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
NCBP2-209ENST00000463783 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
NCBP2-209ENST00000463783 NCOA1Q15788 1441 aa11.79□□□□□ -0.52
NCBP2-209ENST00000463783 ADGRL1O94910 1474 aa11.79□□□□□ -0.52
NCBP2-209ENST00000463783 KDM5AP29375 1690 aaKnown RBP11.79□□□□□ -0.52
NCBP2-209ENST00000463783 TET3O43151 1660 aa11.78□□□□□ -0.52
NCBP2-209ENST00000463783 ROCK1Q13464 1354 aa11.78□□□□□ -0.52
NCBP2-209ENST00000463783 YEATS2Q9ULM3 1422 aa11.78□□□□□ -0.52
NCBP2-209ENST00000463783 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
NCBP2-209ENST00000463783 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
NCBP2-209ENST00000463783 SPHKAPQ2M3C7 1700 aa11.77□□□□□ -0.52
NCBP2-209ENST00000463783 ANP32CO43423 234 aa11.77□□□□□ -0.53
NCBP2-209ENST00000463783 PZPP20742 1482 aa11.77□□□□□ -0.53
NCBP2-209ENST00000463783 PREX1Q8TCU6 1659 aa11.77□□□□□ -0.53
NCBP2-209ENST00000463783 SYNMO15061 1565 aa11.76□□□□□ -0.53
NCBP2-209ENST00000463783 CLTCQ00610 1675 aaKnown RBP11.76□□□□□ -0.53
NCBP2-209ENST00000463783 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
NCBP2-209ENST00000463783 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
NCBP2-209ENST00000463783 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
NCBP2-209ENST00000463783 MSH5O43196 834 aa11.75□□□□□ -0.53
NCBP2-209ENST00000463783 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
NCBP2-209ENST00000463783 MPHOSPH9Q99550 1183 aa11.75□□□□□ -0.53
NCBP2-209ENST00000463783 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
NCBP2-209ENST00000463783 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
NCBP2-209ENST00000463783 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
NCBP2-209ENST00000463783 SENP3-EIF4A1A0A087X0R7 540 aa11.72□□□□□ -0.53
NCBP2-209ENST00000463783 EFCAB6Q5THR3 1501 aa11.72□□□□□ -0.53
NCBP2-209ENST00000463783 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
NCBP2-209ENST00000463783 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.54
NCBP2-209ENST00000463783 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.54
NCBP2-209ENST00000463783 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.54
NCBP2-209ENST00000463783 HNRNPUQ00839 825 aaKnown RBP eCLIP11.71□□□□□ -0.54
NCBP2-209ENST00000463783 MADDQ8WXG6 1647 aa11.7□□□□□ -0.54
NCBP2-209ENST00000463783 ERBINQ96RT1 1412 aa11.7□□□□□ -0.54
NCBP2-209ENST00000463783 ABCC3O15438 1527 aa11.7□□□□□ -0.54
NCBP2-209ENST00000463783 PLA2R1Q13018 1463 aa11.69□□□□□ -0.54
NCBP2-209ENST00000463783 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
NCBP2-209ENST00000463783 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
NCBP2-209ENST00000463783 CNTLNQ9NXG0 1405 aa11.68□□□□□ -0.54
NCBP2-209ENST00000463783 PPLO60437 1756 aa11.68□□□□□ -0.54
NCBP2-209ENST00000463783 SPATA31D1Q6ZQQ2 1576 aa11.68□□□□□ -0.54
NCBP2-209ENST00000463783 RPRD2Q5VT52 1461 aaKnown RBP11.68□□□□□ -0.54
NCBP2-209ENST00000463783 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
NCBP2-209ENST00000463783 CLTCL1P53675 1640 aa11.67□□□□□ -0.54
NCBP2-209ENST00000463783 ATP10AO60312 1499 aa11.67□□□□□ -0.54
NCBP2-209ENST00000463783 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
NCBP2-209ENST00000463783 NRXN3Q9Y4C0 1643 aa11.67□□□□□ -0.54
NCBP2-209ENST00000463783 TMEM131LA2VDJ0 1609 aa11.65□□□□□ -0.54
NCBP2-209ENST00000463783 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
NCBP2-209ENST00000463783 MYO3AQ8NEV4 1616 aa11.65□□□□□ -0.54
NCBP2-209ENST00000463783 PRKRIP1Q9H875 184 aaPredicted RBP11.65□□□□□ -0.54
NCBP2-209ENST00000463783 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
NCBP2-209ENST00000463783 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
NCBP2-209ENST00000463783 PLEKHD1A6NEE1 506 aa11.63□□□□□ -0.55
NCBP2-209ENST00000463783 RIMS1Q86UR5 1692 aaKnown RBP11.62□□□□□ -0.55
NCBP2-209ENST00000463783 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
NCBP2-209ENST00000463783 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
NCBP2-209ENST00000463783 DHX29Q7Z478 1369 aaKnown RBP11.62□□□□□ -0.55
NCBP2-209ENST00000463783 A2MP01023 1474 aa11.62□□□□□ -0.55
NCBP2-209ENST00000463783 TRPM2O94759 1503 aa11.61□□□□□ -0.55
NCBP2-209ENST00000463783 PTPRTO14522 1441 aa11.6□□□□□ -0.55
NCBP2-209ENST00000463783 FAM69CQ0P6D2 419 aa11.59□□□□□ -0.55
NCBP2-209ENST00000463783 MYT1Q01538 1121 aa11.58□□□□□ -0.56
NCBP2-209ENST00000463783 XIRP1Q702N8 1843 aaKnown RBP11.58□□□□□ -0.56
NCBP2-209ENST00000463783 STRCP1A6NGW2 1772 aa11.58□□□□□ -0.56
NCBP2-209ENST00000463783 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
NCBP2-209ENST00000463783 ARHGAP31Q2M1Z3 1444 aa11.57□□□□□ -0.56
NCBP2-209ENST00000463783 ADGRB3O60242 1522 aa11.57□□□□□ -0.56
NCBP2-209ENST00000463783 B4GALNT3Q6L9W6 998 aa11.56□□□□□ -0.56
NCBP2-209ENST00000463783 UGGT1Q9NYU2 1555 aa11.56□□□□□ -0.56
NCBP2-209ENST00000463783 NEFLP07196 543 aa11.56□□□□□ -0.56
NCBP2-209ENST00000463783 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
NCBP2-209ENST00000463783 AFAP1Q8N556 730 aa11.56□□□□□ -0.56
NCBP2-209ENST00000463783 NOS1P29475 1434 aa11.56□□□□□ -0.56
NCBP2-209ENST00000463783 MRS2Q9HD23 443 aa11.55□□□□□ -0.56
NCBP2-209ENST00000463783 KIF1BO60333 1816 aa11.54□□□□□ -0.56
NCBP2-209ENST00000463783 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
NCBP2-209ENST00000463783 RAPGEF3O95398 923 aa11.53□□□□□ -0.56
NCBP2-209ENST00000463783 NRXN1Q9ULB1 1477 aa11.53□□□□□ -0.56
NCBP2-209ENST00000463783 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
NCBP2-209ENST00000463783 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
NCBP2-209ENST00000463783 IQGAP1P46940 1657 aa11.52□□□□□ -0.57
NCBP2-209ENST00000463783 TRPM1Q7Z4N2 1603 aa11.52□□□□□ -0.57
NCBP2-209ENST00000463783 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms