RNA–Protein interactions for RNA: ENST00000463045.2

SDHB-202, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-202ENST00000463045 DDX12PQ92771 950 aa10.27□□□□□ -0.77
SDHB-202ENST00000463045 PCDHGA10Q9Y5H3 936 aa10.27□□□□□ -0.77
SDHB-202ENST00000463045 PSEN2P49810 448 aa10.26□□□□□ -0.77
SDHB-202ENST00000463045 ARHGEF1Q92888 912 aaKnown RBP10.26□□□□□ -0.77
SDHB-202ENST00000463045 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
SDHB-202ENST00000463045 PHF14O94880 888 aa10.24□□□□□ -0.77
SDHB-202ENST00000463045 LSM11P83369 360 aaKnown RBP eCLIP10.24□□□□□ -0.77
SDHB-202ENST00000463045 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
SDHB-202ENST00000463045 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
SDHB-202ENST00000463045 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
SDHB-202ENST00000463045 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
SDHB-202ENST00000463045 GRXCR2A6NFK2 248 aa10.22□□□□□ -0.77
SDHB-202ENST00000463045 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
SDHB-202ENST00000463045 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
SDHB-202ENST00000463045 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
SDHB-202ENST00000463045 EPAS1Q99814 870 aa10.21□□□□□ -0.77
SDHB-202ENST00000463045 PTPREP23469 700 aa10.2□□□□□ -0.78
SDHB-202ENST00000463045 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
SDHB-202ENST00000463045 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
SDHB-202ENST00000463045 RBM33Q96EV2 1170 aaKnown RBP10.2□□□□□ -0.78
SDHB-202ENST00000463045 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
SDHB-202ENST00000463045 NBR1Q14596 966 aa10.19□□□□□ -0.78
SDHB-202ENST00000463045 PRIM1P49642 420 aaKnown RBP10.15□□□□□ -0.78
SDHB-202ENST00000463045 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
SDHB-202ENST00000463045 C6orf132Q5T0Z8 1188 aa10.15□□□□□ -0.78
SDHB-202ENST00000463045 ADGRD1Q6QNK2 874 aa10.15□□□□□ -0.78
SDHB-202ENST00000463045 MLLT3P42568 568 aaPredicted RBP10.14□□□□□ -0.79
SDHB-202ENST00000463045 MAP3K7O43318 606 aa10.13□□□□□ -0.79
SDHB-202ENST00000463045 COL9A1P20849 921 aa10.13□□□□□ -0.79
SDHB-202ENST00000463045 TK2O00142 265 aa10.12□□□□□ -0.79
SDHB-202ENST00000463045 SEMA3EO15041 775 aa10.12□□□□□ -0.79
SDHB-202ENST00000463045 OSBPP22059 807 aa10.12□□□□□ -0.79
SDHB-202ENST00000463045 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
SDHB-202ENST00000463045 HRCP23327 699 aa10.11□□□□□ -0.79
SDHB-202ENST00000463045 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
SDHB-202ENST00000463045 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
SDHB-202ENST00000463045 VPS9D1Q9Y2B5 631 aa10.11□□□□□ -0.79
SDHB-202ENST00000463045 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
SDHB-202ENST00000463045 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
SDHB-202ENST00000463045 SLC4A5Q9BY07 1137 aa10.09□□□□□ -0.79
SDHB-202ENST00000463045 MYT1LQ9UL68 1186 aa10.09□□□□□ -0.79
SDHB-202ENST00000463045 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
SDHB-202ENST00000463045 HRO43593 1189 aa10.07□□□□□ -0.8
SDHB-202ENST00000463045 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
SDHB-202ENST00000463045 STAC3Q96MF2 364 aa10.07□□□□□ -0.8
SDHB-202ENST00000463045 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
SDHB-202ENST00000463045 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
SDHB-202ENST00000463045 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
SDHB-202ENST00000463045 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
SDHB-202ENST00000463045 LOC105371045A0A1W2PR82 267 aa10.01□□□□□ -0.81
SDHB-202ENST00000463045 BHMG1C9JSJ3 638 aaPredicted RBP10.01□□□□□ -0.81
SDHB-202ENST00000463045 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
SDHB-202ENST00000463045 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
SDHB-202ENST00000463045 RABGEF1Q9UJ41 708 aa10□□□□□ -0.81
SDHB-202ENST00000463045 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
SDHB-202ENST00000463045 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
SDHB-202ENST00000463045 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
SDHB-202ENST00000463045 CDCA7LQ96GN5 454 aa9.99□□□□□ -0.81
SDHB-202ENST00000463045 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
SDHB-202ENST00000463045 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
SDHB-202ENST00000463045 PRSS12P56730 875 aa9.98□□□□□ -0.81
SDHB-202ENST00000463045 TSKSQ9UJT2 592 aa9.98□□□□□ -0.81
SDHB-202ENST00000463045 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
SDHB-202ENST00000463045 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
SDHB-202ENST00000463045 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
SDHB-202ENST00000463045 PACS2Q86VP3 889 aa9.96□□□□□ -0.82
SDHB-202ENST00000463045 KCTD12Q96CX2 325 aaKnown RBP9.96□□□□□ -0.82
SDHB-202ENST00000463045 FAM198AQ9UFP1 575 aa9.95□□□□□ -0.82
SDHB-202ENST00000463045 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
SDHB-202ENST00000463045 TTC13Q8NBP0 860 aa9.94□□□□□ -0.82
SDHB-202ENST00000463045 GPR37O15354 613 aa9.92□□□□□ -0.82
SDHB-202ENST00000463045 PTGDRQ13258 359 aa9.92□□□□□ -0.82
SDHB-202ENST00000463045 PADI6Q6TGC4 694 aa9.92□□□□□ -0.82
SDHB-202ENST00000463045 C3orf80F5H4A9 247 aa9.91□□□□□ -0.82
SDHB-202ENST00000463045 SMAPO00193 183 aa9.91□□□□□ -0.82
SDHB-202ENST00000463045 WNT2BQ93097 391 aa9.91□□□□□ -0.82
SDHB-202ENST00000463045 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
SDHB-202ENST00000463045 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
SDHB-202ENST00000463045 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
SDHB-202ENST00000463045 FCHSD2O94868 740 aa9.89□□□□□ -0.83
SDHB-202ENST00000463045 TATDN2Q93075 761 aa9.89□□□□□ -0.83
SDHB-202ENST00000463045 PTPN5P54829 565 aa9.88□□□□□ -0.83
SDHB-202ENST00000463045 NUDT18Q6ZVK8 323 aa9.88□□□□□ -0.83
SDHB-202ENST00000463045 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
SDHB-202ENST00000463045 NBPF26B4DH59 902 aa9.87□□□□□ -0.83
SDHB-202ENST00000463045 FAM98CQ17RN3 349 aaKnown RBP9.87□□□□□ -0.83
SDHB-202ENST00000463045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.87□□□□□ -0.83
SDHB-202ENST00000463045 HCSTQ9UBK5 93 aa9.87□□□□□ -0.83
SDHB-202ENST00000463045 THSD4Q6ZMP0 1018 aa9.86□□□□□ -0.83
SDHB-202ENST00000463045 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
SDHB-202ENST00000463045 BCAMP50895 628 aa9.83□□□□□ -0.84
SDHB-202ENST00000463045 HIC1Q14526 733 aa9.83□□□□□ -0.84
SDHB-202ENST00000463045 FAM161AQ3B820 660 aa9.83□□□□□ -0.84
SDHB-202ENST00000463045 GPIHBP1Q8IV16 184 aa9.83□□□□□ -0.84
SDHB-202ENST00000463045 SOWAHBA6NEL2 793 aa9.81□□□□□ -0.84
SDHB-202ENST00000463045 FECHP22830 423 aa9.81□□□□□ -0.84
SDHB-202ENST00000463045 GNPATO15228 680 aa9.8□□□□□ -0.84
SDHB-202ENST00000463045 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
SDHB-202ENST00000463045 LRCH3Q96II8 777 aa9.8□□□□□ -0.84
SDHB-202ENST00000463045 EYA1Q99502 592 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms