RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 PCDHGA10Q9Y5H3 936 aa7.06□□□□□ -1.28
CD46-210ENST00000462968 ZFRQ96KR1 1074 aaKnown RBP7.05□□□□□ -1.28
CD46-210ENST00000462968 WBP1LQ9NX94 342 aa7.05□□□□□ -1.28
CD46-210ENST00000462968 PDE4AP27815 886 aa7.04□□□□□ -1.28
CD46-210ENST00000462968 KIAA1468Q9P260 1216 aa7.03□□□□□ -1.28
CD46-210ENST00000462968 ONECUT3O60422 494 aaPredicted RBP7.02□□□□□ -1.29
CD46-210ENST00000462968 TRAF7Q6Q0C0 670 aa7.02□□□□□ -1.29
CD46-210ENST00000462968 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
CD46-210ENST00000462968 CHGAP10645 457 aaKnown RBP7.01□□□□□ -1.29
CD46-210ENST00000462968 FBXW7Q969H0 707 aa7.01□□□□□ -1.29
CD46-210ENST00000462968 EMILIN3Q9NT22 766 aa7.01□□□□□ -1.29
CD46-210ENST00000462968 GFRA3O60609 400 aa7□□□□□ -1.29
CD46-210ENST00000462968 PHF14O94880 888 aa7□□□□□ -1.29
CD46-210ENST00000462968 MAP3K9P80192 1104 aa7□□□□□ -1.29
CD46-210ENST00000462968 MFSD10Q14728 455 aa7□□□□□ -1.29
CD46-210ENST00000462968 TYW1BQ6NUM6 668 aa7□□□□□ -1.29
CD46-210ENST00000462968 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
CD46-210ENST00000462968 LARP6Q9BRS8 491 aaKnown RBP6.99□□□□□ -1.29
CD46-210ENST00000462968 SEPT9Q9UHD8 586 aaPredicted RBP6.98□□□□□ -1.29
CD46-210ENST00000462968 TSR3Q9UJK0 312 aaKnown RBP6.98□□□□□ -1.29
CD46-210ENST00000462968 FAM98CQ17RN3 349 aaKnown RBP6.97□□□□□ -1.29
CD46-210ENST00000462968 TRIM6-TRIM34B2RNG4 842 aa6.96□□□□□ -1.3
CD46-210ENST00000462968 C6orf132Q5T0Z8 1188 aa6.96□□□□□ -1.3
CD46-210ENST00000462968 HPS5Q9UPZ3 1129 aa6.96□□□□□ -1.3
CD46-210ENST00000462968 NRG2O14511 850 aaPredicted RBP6.95□□□□□ -1.3
CD46-210ENST00000462968 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.95□□□□□ -1.3
CD46-210ENST00000462968 LRCH3Q96II8 777 aa6.94□□□□□ -1.3
CD46-210ENST00000462968 TJAP1Q5JTD0 557 aa6.93□□□□□ -1.3
CD46-210ENST00000462968 EPAS1Q99814 870 aa6.93□□□□□ -1.3
CD46-210ENST00000462968 PRKD2Q9BZL6 878 aa6.93□□□□□ -1.3
CD46-210ENST00000462968 GTPBP6O43824 516 aaPredicted RBP6.91□□□□□ -1.3
CD46-210ENST00000462968 V9GY48 417 aaPredicted RBP6.91□□□□□ -1.3
CD46-210ENST00000462968 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
CD46-210ENST00000462968 PPP1R18Q6NYC8 613 aa6.88□□□□□ -1.31
CD46-210ENST00000462968 TSKSQ9UJT2 592 aa6.88□□□□□ -1.31
CD46-210ENST00000462968 PPP4CP60510 307 aa6.87□□□□□ -1.31
CD46-210ENST00000462968 ZNF787Q6DD87 383 aa6.87□□□□□ -1.31
CD46-210ENST00000462968 PACS2Q86VP3 889 aa6.86□□□□□ -1.31
CD46-210ENST00000462968 MTRQ99707 1265 aa6.86□□□□□ -1.31
CD46-210ENST00000462968 IL21Q9HBE4 155 aa6.86□□□□□ -1.31
CD46-210ENST00000462968 CADPS2Q86UW7 1296 aa6.85□□□□□ -1.31
CD46-210ENST00000462968 ZNF775Q96BV0 537 aaPredicted RBP6.85□□□□□ -1.31
CD46-210ENST00000462968 RBM33Q96EV2 1170 aaKnown RBP6.85□□□□□ -1.31
CD46-210ENST00000462968 SAMD7Q7Z3H4 446 aa6.84□□□□□ -1.31
CD46-210ENST00000462968 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.84□□□□□ -1.31
CD46-210ENST00000462968 DPYSL4O14531 572 aa6.83□□□□□ -1.32
CD46-210ENST00000462968 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
CD46-210ENST00000462968 PDZRN3Q9UPQ7 1066 aa6.83□□□□□ -1.32
CD46-210ENST00000462968 EN1Q05925 392 aaPredicted RBP6.82□□□□□ -1.32
CD46-210ENST00000462968 TSR1Q2NL82 804 aaKnown RBP6.82□□□□□ -1.32
CD46-210ENST00000462968 DDX12PQ92771 950 aa6.82□□□□□ -1.32
CD46-210ENST00000462968 FAM198AQ9UFP1 575 aa6.81□□□□□ -1.32
CD46-210ENST00000462968 C3orf80F5H4A9 247 aa6.8□□□□□ -1.32
CD46-210ENST00000462968 SMAPO00193 183 aa6.8□□□□□ -1.32
CD46-210ENST00000462968 PRSS12P56730 875 aa6.79□□□□□ -1.32
CD46-210ENST00000462968 NKX2-3Q8TAU0 364 aa6.79□□□□□ -1.32
CD46-210ENST00000462968 CDCA7LQ96GN5 454 aa6.79□□□□□ -1.32
CD46-210ENST00000462968 MAP3K7O43318 606 aa6.78□□□□□ -1.32
CD46-210ENST00000462968 APLP1P51693 650 aa6.78□□□□□ -1.32
CD46-210ENST00000462968 NBR1Q14596 966 aa6.78□□□□□ -1.32
CD46-210ENST00000462968 TRIM67Q6ZTA4 783 aa6.78□□□□□ -1.32
CD46-210ENST00000462968 TATDN2Q93075 761 aa6.77□□□□□ -1.33
CD46-210ENST00000462968 TMUB1Q9BVT8 246 aa6.76□□□□□ -1.33
CD46-210ENST00000462968 PRIM1P49642 420 aaKnown RBP6.75□□□□□ -1.33
CD46-210ENST00000462968 PDIA6Q15084 440 aa6.75□□□□□ -1.33
CD46-210ENST00000462968 NBPF26B4DH59 902 aa6.74□□□□□ -1.33
CD46-210ENST00000462968 GGCXP38435 758 aa6.74□□□□□ -1.33
CD46-210ENST00000462968 CERKQ8TCT0 537 aa6.74□□□□□ -1.33
CD46-210ENST00000462968 PNMA3Q9UL41 463 aa6.74□□□□□ -1.33
CD46-210ENST00000462968 CCDC180Q9P1Z9 1646 aa6.74□□□□□ -1.33
CD46-210ENST00000462968 MYT1Q01538 1121 aa6.73□□□□□ -1.33
CD46-210ENST00000462968 EMID1Q96A84 441 aaPredicted RBP6.73□□□□□ -1.33
CD46-210ENST00000462968 POTECB2RU33 542 aa6.72□□□□□ -1.33
CD46-210ENST00000462968 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
CD46-210ENST00000462968 DGAT1O75907 488 aa6.7□□□□□ -1.34
CD46-210ENST00000462968 COPS2P61201 443 aa6.7□□□□□ -1.34
CD46-210ENST00000462968 NUDT18Q6ZVK8 323 aa6.7□□□□□ -1.34
CD46-210ENST00000462968 NECTIN2Q92692 538 aa6.7□□□□□ -1.34
CD46-210ENST00000462968 RBM27Q9P2N5 1060 aaKnown RBP6.7□□□□□ -1.34
CD46-210ENST00000462968 SPDYE16A6NNV3 312 aaPredicted RBP6.69□□□□□ -1.34
CD46-210ENST00000462968 RNF40O75150 1001 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 ZPR1O75312 459 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 SLC19A1P41440 591 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 PRR20EP86478 221 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 PRR20CP86479 221 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 PRR20DP86480 221 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 PRR20BP86481 221 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 PRR20AP86496 221 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 RB1CC1Q8TDY2 1594 aa6.69□□□□□ -1.34
CD46-210ENST00000462968 RNF223E7ERA6 249 aa6.68□□□□□ -1.34
CD46-210ENST00000462968 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
CD46-210ENST00000462968 PKDCCQ504Y2 493 aa6.68□□□□□ -1.34
CD46-210ENST00000462968 TTC13Q8NBP0 860 aa6.68□□□□□ -1.34
CD46-210ENST00000462968 SWT1Q5T5J6 900 aaKnown RBP6.67□□□□□ -1.34
CD46-210ENST00000462968 SPRYD7Q5W111 196 aa6.67□□□□□ -1.34
CD46-210ENST00000462968 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
CD46-210ENST00000462968 CDHR5Q9HBB8 845 aa6.67□□□□□ -1.34
CD46-210ENST00000462968 ZNF598Q86UK7 904 aaKnown RBP6.66□□□□□ -1.34
CD46-210ENST00000462968 SLF2Q8IX21 1173 aa6.66□□□□□ -1.34
CD46-210ENST00000462968 OSBPP22059 807 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms