RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 VARS2Q5ST30 1063 aaKnown RBP13.74□□□□□ -0.21
UBE4B-204ENST00000462658 PSDA5PKW4 1024 aaPredicted RBP13.73□□□□□ -0.21
UBE4B-204ENST00000462658 FAM205CA6NFA0 338 aa13.73□□□□□ -0.21
UBE4B-204ENST00000462658 GPR37O15354 613 aa13.71□□□□□ -0.21
UBE4B-204ENST00000462658 C6orf132Q5T0Z8 1188 aa13.7□□□□□ -0.22
UBE4B-204ENST00000462658 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
UBE4B-204ENST00000462658 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
UBE4B-204ENST00000462658 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
UBE4B-204ENST00000462658 NACADO15069 1562 aa13.66□□□□□ -0.22
UBE4B-204ENST00000462658 PTGDRQ13258 359 aa13.66□□□□□ -0.22
UBE4B-204ENST00000462658 HS3ST6Q96QI5 342 aa13.66□□□□□ -0.22
UBE4B-204ENST00000462658 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
UBE4B-204ENST00000462658 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
UBE4B-204ENST00000462658 ZMYND10O75800 440 aa13.65□□□□□ -0.22
UBE4B-204ENST00000462658 FCHSD2O94868 740 aa13.65□□□□□ -0.22
UBE4B-204ENST00000462658 COL9A1P20849 921 aa13.63□□□□□ -0.23
UBE4B-204ENST00000462658 FECHP22830 423 aa13.62□□□□□ -0.23
UBE4B-204ENST00000462658 PTPREP23469 700 aa13.62□□□□□ -0.23
UBE4B-204ENST00000462658 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
UBE4B-204ENST00000462658 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
UBE4B-204ENST00000462658 PSEN2P49810 448 aa13.6□□□□□ -0.23
UBE4B-204ENST00000462658 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
UBE4B-204ENST00000462658 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
UBE4B-204ENST00000462658 GNPATO15228 680 aa13.59□□□□□ -0.23
UBE4B-204ENST00000462658 HIC1Q14526 733 aa13.59□□□□□ -0.23
UBE4B-204ENST00000462658 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
UBE4B-204ENST00000462658 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
UBE4B-204ENST00000462658 UNC13AQ9UPW8 1703 aa13.58□□□□□ -0.24
UBE4B-204ENST00000462658 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
UBE4B-204ENST00000462658 MYO15BQ96JP2 1530 aa13.57□□□□□ -0.24
UBE4B-204ENST00000462658 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
UBE4B-204ENST00000462658 KRI1Q8N9T8 703 aaKnown RBP13.55□□□□□ -0.24
UBE4B-204ENST00000462658 ARHGAP33O14559 1287 aa13.54□□□□□ -0.24
UBE4B-204ENST00000462658 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
UBE4B-204ENST00000462658 CERKQ8TCT0 537 aa13.54□□□□□ -0.24
UBE4B-204ENST00000462658 DMRTA1Q5VZB9 504 aa13.53□□□□□ -0.24
UBE4B-204ENST00000462658 KCNH8Q96L42 1107 aa13.52□□□□□ -0.25
UBE4B-204ENST00000462658 PRSS12P56730 875 aa13.51□□□□□ -0.25
UBE4B-204ENST00000462658 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
UBE4B-204ENST00000462658 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
UBE4B-204ENST00000462658 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
UBE4B-204ENST00000462658 PBX2P40425 430 aa13.49□□□□□ -0.25
UBE4B-204ENST00000462658 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
UBE4B-204ENST00000462658 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
UBE4B-204ENST00000462658 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
UBE4B-204ENST00000462658 IRF6O14896 467 aa13.47□□□□□ -0.25
UBE4B-204ENST00000462658 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
UBE4B-204ENST00000462658 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
UBE4B-204ENST00000462658 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
UBE4B-204ENST00000462658 MINK1Q8N4C8 1332 aaPredicted RBP13.46□□□□□ -0.25
UBE4B-204ENST00000462658 POTEMA6NI47 508 aa13.46□□□□□ -0.25
UBE4B-204ENST00000462658 TTC13Q8NBP0 860 aa13.46□□□□□ -0.25
UBE4B-204ENST00000462658 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
UBE4B-204ENST00000462658 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
UBE4B-204ENST00000462658 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
UBE4B-204ENST00000462658 C3orf80F5H4A9 247 aa13.44□□□□□ -0.26
UBE4B-204ENST00000462658 AK7Q96M32 723 aa13.43□□□□□ -0.26
UBE4B-204ENST00000462658 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
UBE4B-204ENST00000462658 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
UBE4B-204ENST00000462658 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
UBE4B-204ENST00000462658 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
UBE4B-204ENST00000462658 SMAPO00193 183 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 TRIM66O15016 1216 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 PACS2Q86VP3 889 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 SLC4A5Q9BY07 1137 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 KRTAP3-3Q9BYR6 98 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 KRTAP3-2Q9BYR7 98 aa13.38□□□□□ -0.27
UBE4B-204ENST00000462658 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
UBE4B-204ENST00000462658 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
UBE4B-204ENST00000462658 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
UBE4B-204ENST00000462658 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
UBE4B-204ENST00000462658 ONECUT3O60422 494 aaPredicted RBP13.36□□□□□ -0.27
UBE4B-204ENST00000462658 TATDN2Q93075 761 aa13.36□□□□□ -0.27
UBE4B-204ENST00000462658 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
UBE4B-204ENST00000462658 NLRP7Q8WX94 980 aa13.35□□□□□ -0.27
UBE4B-204ENST00000462658 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
UBE4B-204ENST00000462658 METTL3Q86U44 580 aaKnown RBP13.34□□□□□ -0.27
UBE4B-204ENST00000462658 PXYLP1Q8TE99 480 aa13.34□□□□□ -0.27
UBE4B-204ENST00000462658 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
UBE4B-204ENST00000462658 OATP04181 439 aa13.33□□□□□ -0.28
UBE4B-204ENST00000462658 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
UBE4B-204ENST00000462658 EYA1Q99502 592 aa13.33□□□□□ -0.28
UBE4B-204ENST00000462658 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
UBE4B-204ENST00000462658 TK2O00142 265 aa13.32□□□□□ -0.28
UBE4B-204ENST00000462658 RBM46Q8TBY0 533 aaKnown RBP13.32□□□□□ -0.28
UBE4B-204ENST00000462658 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
UBE4B-204ENST00000462658 PDE4DQ08499 809 aa13.31□□□□□ -0.28
UBE4B-204ENST00000462658 BHMG1C9JSJ3 638 aaPredicted RBP13.28□□□□□ -0.28
UBE4B-204ENST00000462658 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
UBE4B-204ENST00000462658 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
UBE4B-204ENST00000462658 MDM2Q00987 491 aaPredicted RBP13.27□□□□□ -0.29
UBE4B-204ENST00000462658 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
UBE4B-204ENST00000462658 AMHR2Q16671 573 aa13.27□□□□□ -0.29
UBE4B-204ENST00000462658 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
UBE4B-204ENST00000462658 HRO43593 1189 aa13.26□□□□□ -0.29
UBE4B-204ENST00000462658 TTLL12Q14166 644 aaPredicted RBP13.25□□□□□ -0.29
UBE4B-204ENST00000462658 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
UBE4B-204ENST00000462658 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
UBE4B-204ENST00000462658 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms