RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 UHRF1BP1LA0JNW5 1464 aa17.48■□□□□ 0.39
PMPCA-205ENST00000462616 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
PMPCA-205ENST00000462616 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
PMPCA-205ENST00000462616 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
PMPCA-205ENST00000462616 RALBP1Q15311 655 aa17.46■□□□□ 0.39
PMPCA-205ENST00000462616 EIF5BO60841 1220 aaKnown RBP17.45■□□□□ 0.38
PMPCA-205ENST00000462616 NUP155O75694 1391 aa17.44■□□□□ 0.38
PMPCA-205ENST00000462616 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
PMPCA-205ENST00000462616 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
PMPCA-205ENST00000462616 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
PMPCA-205ENST00000462616 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
PMPCA-205ENST00000462616 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
PMPCA-205ENST00000462616 PTPRGP23470 1445 aa17.43■□□□□ 0.38
PMPCA-205ENST00000462616 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
PMPCA-205ENST00000462616 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
PMPCA-205ENST00000462616 RGS3P49796 1198 aa17.42■□□□□ 0.38
PMPCA-205ENST00000462616 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
PMPCA-205ENST00000462616 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
PMPCA-205ENST00000462616 MS4A1P11836 297 aa17.41■□□□□ 0.38
PMPCA-205ENST00000462616 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
PMPCA-205ENST00000462616 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.38
PMPCA-205ENST00000462616 NFKBIBQ15653 356 aa17.39■□□□□ 0.38
PMPCA-205ENST00000462616 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.38
PMPCA-205ENST00000462616 PZPP20742 1482 aa17.39■□□□□ 0.37
PMPCA-205ENST00000462616 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
PMPCA-205ENST00000462616 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
PMPCA-205ENST00000462616 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
PMPCA-205ENST00000462616 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
PMPCA-205ENST00000462616 ARID4BQ4LE39 1312 aaPredicted RBP17.38■□□□□ 0.37
PMPCA-205ENST00000462616 GSE1Q14687 1217 aa17.38■□□□□ 0.37
PMPCA-205ENST00000462616 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
PMPCA-205ENST00000462616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.371e-8■■□□□ 13.8
PMPCA-205ENST00000462616 NBPF1Q3BBV0 1214 aa17.37■□□□□ 0.37
PMPCA-205ENST00000462616 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
PMPCA-205ENST00000462616 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
PMPCA-205ENST00000462616 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
PMPCA-205ENST00000462616 TSPY4P0CV99 314 aa17.35■□□□□ 0.37
PMPCA-205ENST00000462616 TSPY10P0CW01 314 aa17.35■□□□□ 0.37
PMPCA-205ENST00000462616 PANK3Q9H999 370 aa17.34■□□□□ 0.37
PMPCA-205ENST00000462616 ANKRD30AQ9BXX3 1397 aa17.34■□□□□ 0.37
PMPCA-205ENST00000462616 ANKRD50Q9ULJ7 1429 aa17.32■□□□□ 0.36
PMPCA-205ENST00000462616 ZCCHC11Q5TAX3 1644 aaKnown RBP17.31■□□□□ 0.36
PMPCA-205ENST00000462616 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.36
PMPCA-205ENST00000462616 ATP10BO94823 1461 aa17.3■□□□□ 0.36
PMPCA-205ENST00000462616 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
PMPCA-205ENST00000462616 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
PMPCA-205ENST00000462616 ARXQ96QS3 562 aa17.3■□□□□ 0.36
PMPCA-205ENST00000462616 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
PMPCA-205ENST00000462616 KDM5CP41229 1560 aa17.29■□□□□ 0.36
PMPCA-205ENST00000462616 CAMSAP2Q08AD1 1489 aa17.28■□□□□ 0.36
PMPCA-205ENST00000462616 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
PMPCA-205ENST00000462616 POLR1AO95602 1720 aaPredicted RBP17.28■□□□□ 0.36
PMPCA-205ENST00000462616 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
PMPCA-205ENST00000462616 MBD5Q9P267 1494 aa17.27■□□□□ 0.36
PMPCA-205ENST00000462616 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
PMPCA-205ENST00000462616 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
PMPCA-205ENST00000462616 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
PMPCA-205ENST00000462616 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
PMPCA-205ENST00000462616 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
PMPCA-205ENST00000462616 KIF14Q15058 1648 aa17.23■□□□□ 0.35
PMPCA-205ENST00000462616 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
PMPCA-205ENST00000462616 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
PMPCA-205ENST00000462616 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
PMPCA-205ENST00000462616 SLKQ9H2G2 1235 aaPredicted RBP17.2■□□□□ 0.34
PMPCA-205ENST00000462616 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
PMPCA-205ENST00000462616 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
PMPCA-205ENST00000462616 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
PMPCA-205ENST00000462616 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
PMPCA-205ENST00000462616 TMF1P82094 1093 aa17.19■□□□□ 0.34
PMPCA-205ENST00000462616 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.19■□□□□ 0.34
PMPCA-205ENST00000462616 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
PMPCA-205ENST00000462616 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
PMPCA-205ENST00000462616 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
PMPCA-205ENST00000462616 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
PMPCA-205ENST00000462616 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
PMPCA-205ENST00000462616 BCAR3O75815 825 aa17.16■□□□□ 0.34
PMPCA-205ENST00000462616 DUSP27Q5VZP5 1158 aa17.16■□□□□ 0.34
PMPCA-205ENST00000462616 C9orf84Q5VXU9 1444 aa17.16■□□□□ 0.34
PMPCA-205ENST00000462616 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
PMPCA-205ENST00000462616 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
PMPCA-205ENST00000462616 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
PMPCA-205ENST00000462616 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
PMPCA-205ENST00000462616 TESK2Q96S53 571 aa17.13■□□□□ 0.33
PMPCA-205ENST00000462616 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
PMPCA-205ENST00000462616 APAF1O14727 1248 aa17.13■□□□□ 0.33
PMPCA-205ENST00000462616 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
PMPCA-205ENST00000462616 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
PMPCA-205ENST00000462616 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
PMPCA-205ENST00000462616 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
PMPCA-205ENST00000462616 POGKQ9P215 609 aa17.11■□□□□ 0.33
PMPCA-205ENST00000462616 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
PMPCA-205ENST00000462616 PREX2Q70Z35 1606 aa17.11■□□□□ 0.33
PMPCA-205ENST00000462616 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
PMPCA-205ENST00000462616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.09■□□□□ 0.33
PMPCA-205ENST00000462616 SEC24BO95487 1268 aa17.09■□□□□ 0.33
PMPCA-205ENST00000462616 IGHDP01880 384 aa17.08■□□□□ 0.33
PMPCA-205ENST00000462616 COG6Q9Y2V7 657 aa17.08■□□□□ 0.33
PMPCA-205ENST00000462616 GLI2P10070 1586 aa17.08■□□□□ 0.33
PMPCA-205ENST00000462616 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
PMPCA-205ENST00000462616 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms