RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
DDX39B-216ENST00000462421 MAST1Q9Y2H9 1570 aa13.65□□□□□ -0.22
DDX39B-216ENST00000462421 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
DDX39B-216ENST00000462421 DAPK1P53355 1430 aa13.64□□□□□ -0.23
DDX39B-216ENST00000462421 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
DDX39B-216ENST00000462421 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
DDX39B-216ENST00000462421 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
DDX39B-216ENST00000462421 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
DDX39B-216ENST00000462421 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
DDX39B-216ENST00000462421 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
DDX39B-216ENST00000462421 CLTCQ00610 1675 aaKnown RBP13.61□□□□□ -0.23
DDX39B-216ENST00000462421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.232e-16■■■□□ 15.7
DDX39B-216ENST00000462421 ABCC5O15440 1437 aa13.61□□□□□ -0.23
DDX39B-216ENST00000462421 C3P01024 1663 aa13.6□□□□□ -0.23
DDX39B-216ENST00000462421 DNMT1P26358 1616 aaKnown RBP13.6□□□□□ -0.23
DDX39B-216ENST00000462421 ITGAEP38570 1179 aa13.59□□□□□ -0.23
DDX39B-216ENST00000462421 PPARGC1BQ86YN6 1023 aaKnown RBP13.59□□□□□ -0.23
DDX39B-216ENST00000462421 EIF2AK4Q9P2K8 1649 aaKnown RBP13.59□□□□□ -0.23
DDX39B-216ENST00000462421 TNRQ92752 1358 aa13.58□□□□□ -0.24
DDX39B-216ENST00000462421 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
DDX39B-216ENST00000462421 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
DDX39B-216ENST00000462421 PTPRKQ15262 1439 aa13.56□□□□□ -0.24
DDX39B-216ENST00000462421 PZPP20742 1482 aa13.55□□□□□ -0.24
DDX39B-216ENST00000462421 SETD1BQ9UPS6 1966 aaKnown RBP13.55□□□□□ -0.24
DDX39B-216ENST00000462421 ZC3H13Q5T200 1668 aaKnown RBP13.55□□□□□ -0.24
DDX39B-216ENST00000462421 PKD2Q13563 968 aa13.54□□□□□ -0.24
DDX39B-216ENST00000462421 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-216ENST00000462421 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
DDX39B-216ENST00000462421 NCOA1Q15788 1441 aa13.52□□□□□ -0.25
DDX39B-216ENST00000462421 ANKRD50Q9ULJ7 1429 aa13.52□□□□□ -0.25
DDX39B-216ENST00000462421 NLRP1Q9C000 1473 aa13.52□□□□□ -0.25
DDX39B-216ENST00000462421 MYO3AQ8NEV4 1616 aa13.51□□□□□ -0.25
DDX39B-216ENST00000462421 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
DDX39B-216ENST00000462421 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
DDX39B-216ENST00000462421 ADGRL2O95490 1459 aa13.51□□□□□ -0.25
DDX39B-216ENST00000462421 ABCC3O15438 1527 aa13.5□□□□□ -0.25
DDX39B-216ENST00000462421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDX39B-216ENST00000462421 CAMSAP1Q5T5Y3 1602 aa13.5□□□□□ -0.25
DDX39B-216ENST00000462421 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
DDX39B-216ENST00000462421 FBXO31Q5XUX0 539 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-216ENST00000462421 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
DDX39B-216ENST00000462421 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-216ENST00000462421 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
DDX39B-216ENST00000462421 PTPRTO14522 1441 aa13.47□□□□□ -0.25
DDX39B-216ENST00000462421 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
DDX39B-216ENST00000462421 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
DDX39B-216ENST00000462421 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
DDX39B-216ENST00000462421 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
DDX39B-216ENST00000462421 ERVK-7P63135 1459 aa13.45□□□□□ -0.26
DDX39B-216ENST00000462421 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
DDX39B-216ENST00000462421 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
DDX39B-216ENST00000462421 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
DDX39B-216ENST00000462421 HDGFP51858 240 aaKnown RBP13.43□□□□□ -0.26
DDX39B-216ENST00000462421 BCANQ96GW7 911 aa13.43□□□□□ -0.26
DDX39B-216ENST00000462421 CEP152O94986 1710 aa13.42□□□□□ -0.26
DDX39B-216ENST00000462421 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
DDX39B-216ENST00000462421 RRBP1Q9P2E9 1410 aaKnown RBP13.41□□□□□ -0.26
DDX39B-216ENST00000462421 SLC52A1Q9NWF4 448 aa13.41□□□□□ -0.26
DDX39B-216ENST00000462421 DEPDC5O75140 1603 aa13.41□□□□□ -0.26
DDX39B-216ENST00000462421 NUP155O75694 1391 aa13.41□□□□□ -0.26
DDX39B-216ENST00000462421 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
DDX39B-216ENST00000462421 MROH1Q8NDA8 1641 aa13.4□□□□□ -0.26
DDX39B-216ENST00000462421 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-216ENST00000462421 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
DDX39B-216ENST00000462421 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
DDX39B-216ENST00000462421 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
DDX39B-216ENST00000462421 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
DDX39B-216ENST00000462421 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
DDX39B-216ENST00000462421 EFCAB6Q5THR3 1501 aa13.37□□□□□ -0.27
DDX39B-216ENST00000462421 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-216ENST00000462421 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
DDX39B-216ENST00000462421 SCAF11Q99590 1463 aaKnown RBP13.34□□□□□ -0.27
DDX39B-216ENST00000462421 UNC13BO14795 1591 aa13.33□□□□□ -0.28
DDX39B-216ENST00000462421 VWDEQ8N2E2 1590 aa13.33□□□□□ -0.28
DDX39B-216ENST00000462421 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-216ENST00000462421 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX39B-216ENST00000462421 TET3O43151 1660 aa13.33□□□□□ -0.28
DDX39B-216ENST00000462421 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-216ENST00000462421 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-216ENST00000462421 IDI1Q13907 227 aa13.32□□□□□ -0.28
DDX39B-216ENST00000462421 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
DDX39B-216ENST00000462421 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
DDX39B-216ENST00000462421 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
DDX39B-216ENST00000462421 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-216ENST00000462421 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
DDX39B-216ENST00000462421 CPS1P31327 1500 aa13.3□□□□□ -0.28
DDX39B-216ENST00000462421 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
DDX39B-216ENST00000462421 GCC2Q8IWJ2 1684 aa13.3□□□□□ -0.28
DDX39B-216ENST00000462421 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
DDX39B-216ENST00000462421 NOS1P29475 1434 aa13.3□□□□□ -0.28
DDX39B-216ENST00000462421 ADGRB3O60242 1522 aa13.29□□□□□ -0.28
DDX39B-216ENST00000462421 IQGAP3Q86VI3 1631 aa13.29□□□□□ -0.28
DDX39B-216ENST00000462421 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
DDX39B-216ENST00000462421 MED14O60244 1454 aa13.29□□□□□ -0.28
DDX39B-216ENST00000462421 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
DDX39B-216ENST00000462421 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
DDX39B-216ENST00000462421 TOM1O60784 492 aa13.28□□□□□ -0.28
DDX39B-216ENST00000462421 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
DDX39B-216ENST00000462421 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.28
DDX39B-216ENST00000462421 NAIPQ13075 1403 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms