RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 AMHR2Q16671 573 aa8.58□□□□□ -1.04
FN1-215ENST00000461974 ARSIQ5FYB1 569 aa8.58□□□□□ -1.04
FN1-215ENST00000461974 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
FN1-215ENST00000461974 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
FN1-215ENST00000461974 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
FN1-215ENST00000461974 CDHR5Q9HBB8 845 aa8.56□□□□□ -1.04
FN1-215ENST00000461974 PDE4DQ08499 809 aa8.55□□□□□ -1.04
FN1-215ENST00000461974 ZNF454Q8N9F8 522 aa8.55□□□□□ -1.04
FN1-215ENST00000461974 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
FN1-215ENST00000461974 C6orf132Q5T0Z8 1188 aa8.54□□□□□ -1.04
FN1-215ENST00000461974 FECHP22830 423 aa8.53□□□□□ -1.04
FN1-215ENST00000461974 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
FN1-215ENST00000461974 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.04
FN1-215ENST00000461974 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
FN1-215ENST00000461974 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
FN1-215ENST00000461974 LHX8Q68G74 356 aa8.52□□□□□ -1.05
FN1-215ENST00000461974 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
FN1-215ENST00000461974 ADAM33Q9BZ11 813 aa8.52□□□□□ -1.05
FN1-215ENST00000461974 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
FN1-215ENST00000461974 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
FN1-215ENST00000461974 PPP1R3GB7ZBB8 358 aa8.48□□□□□ -1.05
FN1-215ENST00000461974 OATP04181 439 aa8.47□□□□□ -1.05
FN1-215ENST00000461974 PARP9Q8IXQ6 854 aa8.47□□□□□ -1.05
FN1-215ENST00000461974 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
FN1-215ENST00000461974 PTPREP23469 700 aa8.46□□□□□ -1.06
FN1-215ENST00000461974 PRSS12P56730 875 aa8.46□□□□□ -1.06
FN1-215ENST00000461974 PADI6Q6TGC4 694 aa8.45□□□□□ -1.06
FN1-215ENST00000461974 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
FN1-215ENST00000461974 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
FN1-215ENST00000461974 ADGRG1Q9Y653 693 aa8.45□□□□□ -1.06
FN1-215ENST00000461974 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
FN1-215ENST00000461974 CDCA7LQ96GN5 454 aa8.44□□□□□ -1.06
FN1-215ENST00000461974 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
FN1-215ENST00000461974 CLCN1P35523 988 aa8.43□□□□□ -1.06
FN1-215ENST00000461974 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
FN1-215ENST00000461974 TTLL12Q14166 644 aaPredicted RBP8.42□□□□□ -1.06
FN1-215ENST00000461974 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
FN1-215ENST00000461974 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
FN1-215ENST00000461974 COL9A1P20849 921 aa8.41□□□□□ -1.06
FN1-215ENST00000461974 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
FN1-215ENST00000461974 KCNH8Q96L42 1107 aa8.41□□□□□ -1.06
FN1-215ENST00000461974 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
FN1-215ENST00000461974 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
FN1-215ENST00000461974 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
FN1-215ENST00000461974 PHOX2BQ99453 314 aa8.4□□□□□ -1.06
FN1-215ENST00000461974 TRIM6-TRIM34B2RNG4 842 aa8.39□□□□□ -1.07
FN1-215ENST00000461974 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
FN1-215ENST00000461974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
FN1-215ENST00000461974 ST18O60284 1047 aa8.38□□□□□ -1.07
FN1-215ENST00000461974 PBX2P40425 430 aa8.38□□□□□ -1.07
FN1-215ENST00000461974 REPIN1Q9BWE0 567 aaKnown RBP8.38□□□□□ -1.07
FN1-215ENST00000461974 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
FN1-215ENST00000461974 TSKSQ9UJT2 592 aa8.38□□□□□ -1.07
FN1-215ENST00000461974 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
FN1-215ENST00000461974 EYA1Q99502 592 aa8.37□□□□□ -1.07
FN1-215ENST00000461974 FAM198AQ9UFP1 575 aa8.37□□□□□ -1.07
FN1-215ENST00000461974 PLEKHG3A1L390 1219 aa8.36□□□□□ -1.07
FN1-215ENST00000461974 ERBB3P21860 1342 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 ARHGAP33O14559 1287 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 MS4A1P11836 297 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
FN1-215ENST00000461974 PACS2Q86VP3 889 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 IL27Q8NEV9 243 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 KCNK17Q96T54 332 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
FN1-215ENST00000461974 FAM217BQ9NTX9 383 aaPredicted RBP8.35□□□□□ -1.07
FN1-215ENST00000461974 VARS2Q5ST30 1063 aaKnown RBP8.34□□□□□ -1.07
FN1-215ENST00000461974 ZNF687Q8N1G0 1237 aa8.34□□□□□ -1.07
FN1-215ENST00000461974 EMP3P54852 163 aa8.33□□□□□ -1.08
FN1-215ENST00000461974 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
FN1-215ENST00000461974 TATDN2Q93075 761 aa8.33□□□□□ -1.08
FN1-215ENST00000461974 DNAJB2P25686 324 aa8.32□□□□□ -1.08
FN1-215ENST00000461974 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
FN1-215ENST00000461974 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
FN1-215ENST00000461974 RABGEF1Q9UJ41 708 aa8.32□□□□□ -1.08
FN1-215ENST00000461974 RCCD1A6NED2 376 aa8.31□□□□□ -1.08
FN1-215ENST00000461974 NUDT18Q6ZVK8 323 aa8.31□□□□□ -1.08
FN1-215ENST00000461974 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
FN1-215ENST00000461974 PROX2Q3B8N5 592 aa8.3□□□□□ -1.08
FN1-215ENST00000461974 SULF1Q8IWU6 871 aa8.3□□□□□ -1.08
FN1-215ENST00000461974 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
FN1-215ENST00000461974 DIXDC1Q155Q3 683 aa8.29□□□□□ -1.08
FN1-215ENST00000461974 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
FN1-215ENST00000461974 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
FN1-215ENST00000461974 TK2O00142 265 aa8.28□□□□□ -1.08
FN1-215ENST00000461974 PSEN2P49810 448 aa8.28□□□□□ -1.08
FN1-215ENST00000461974 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
FN1-215ENST00000461974 LAPTM4BQ86VI4 370 aa8.27□□□□□ -1.09
FN1-215ENST00000461974 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
FN1-215ENST00000461974 CD46P15529 392 aa8.26□□□□□ -1.09
FN1-215ENST00000461974 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
FN1-215ENST00000461974 MARVELD3Q96A59 401 aa8.26□□□□□ -1.09
FN1-215ENST00000461974 KIAA1468Q9P260 1216 aa8.26□□□□□ -1.09
FN1-215ENST00000461974 VPS9D1Q9Y2B5 631 aa8.26□□□□□ -1.09
FN1-215ENST00000461974 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
FN1-215ENST00000461974 SKIV2LQ15477 1246 aaKnown RBP8.25□□□□□ -1.09
FN1-215ENST00000461974 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
FN1-215ENST00000461974 NLRP7Q8WX94 980 aa8.25□□□□□ -1.09
FN1-215ENST00000461974 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
FN1-215ENST00000461974 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms