RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 MAP3K9P80192 1104 aa7.39□□□□□ -1.23
CDHR3-202ENST00000461766 OXER1Q8TDS5 423 aa7.39□□□□□ -1.23
CDHR3-202ENST00000461766 UPF1Q92900 1129 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDHR3-202ENST00000461766 CDAN1Q8IWY9 1227 aa7.38□□□□□ -1.23
CDHR3-202ENST00000461766 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
CDHR3-202ENST00000461766 VPS8Q8N3P4 1428 aa7.37□□□□□ -1.23
CDHR3-202ENST00000461766 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
CDHR3-202ENST00000461766 SMARCA4P51532 1647 aa7.37□□□□□ -1.23
CDHR3-202ENST00000461766 GPIHBP1Q8IV16 184 aa7.36□□□□□ -1.23
CDHR3-202ENST00000461766 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.36□□□□□ -1.23
CDHR3-202ENST00000461766 ZMYND10O75800 440 aa7.35□□□□□ -1.23
CDHR3-202ENST00000461766 SOGA1O94964 1423 aa7.35□□□□□ -1.23
CDHR3-202ENST00000461766 SLC34A2O95436 690 aa7.34□□□□□ -1.23
CDHR3-202ENST00000461766 PTCD2Q8WV60 388 aaKnown RBP7.34□□□□□ -1.23
CDHR3-202ENST00000461766 CUX2O14529 1486 aa7.33□□□□□ -1.24
CDHR3-202ENST00000461766 TBC1D12O60347 775 aa7.33□□□□□ -1.24
CDHR3-202ENST00000461766 PTGER2P43116 358 aa7.33□□□□□ -1.24
CDHR3-202ENST00000461766 CLIP1P30622 1438 aa7.33□□□□□ -1.24
CDHR3-202ENST00000461766 GRXCR2A6NFK2 248 aa7.32□□□□□ -1.24
CDHR3-202ENST00000461766 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-202ENST00000461766 BARGINQ6ZT62 677 aa7.32□□□□□ -1.24
CDHR3-202ENST00000461766 SLC24A3Q9HC58 644 aa7.32□□□□□ -1.24
CDHR3-202ENST00000461766 MYT1LQ9UL68 1186 aa7.32□□□□□ -1.24
CDHR3-202ENST00000461766 EVI5O60447 810 aa7.31□□□□□ -1.24
CDHR3-202ENST00000461766 DHX57Q6P158 1386 aaKnown RBP7.31□□□□□ -1.24
CDHR3-202ENST00000461766 UBTFP17480 764 aaKnown RBP7.3□□□□□ -1.24
CDHR3-202ENST00000461766 GPR37O15354 613 aa7.29□□□□□ -1.24
CDHR3-202ENST00000461766 OSBPP22059 807 aa7.29□□□□□ -1.24
CDHR3-202ENST00000461766 DDX12PQ92771 950 aa7.29□□□□□ -1.24
CDHR3-202ENST00000461766 ST18O60284 1047 aa7.28□□□□□ -1.24
CDHR3-202ENST00000461766 BRPF1P55201 1214 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-202ENST00000461766 ANO8Q9HCE9 1232 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-202ENST00000461766 ERICH3Q5RHP9 1530 aa7.27□□□□□ -1.25
CDHR3-202ENST00000461766 RUSC2Q8N2Y8 1516 aa7.27□□□□□ -1.25
CDHR3-202ENST00000461766 RRBP1Q9P2E9 1410 aaKnown RBP7.27□□□□□ -1.25
CDHR3-202ENST00000461766 SYNJ1O43426 1573 aa7.26□□□□□ -1.25
CDHR3-202ENST00000461766 PEG3Q9GZU2 1588 aa7.26□□□□□ -1.25
CDHR3-202ENST00000461766 NUTM2FA1L443 756 aa7.26□□□□□ -1.25
CDHR3-202ENST00000461766 NEFLP07196 543 aa7.26□□□□□ -1.25
CDHR3-202ENST00000461766 PCDHGA4Q9Y5G9 962 aa7.26□□□□□ -1.25
CDHR3-202ENST00000461766 AK7Q96M32 723 aa7.25□□□□□ -1.25
CDHR3-202ENST00000461766 PRIM1P49642 420 aaKnown RBP7.24□□□□□ -1.25
CDHR3-202ENST00000461766 TMEM132AQ24JP5 1023 aa7.24□□□□□ -1.25
CDHR3-202ENST00000461766 KRI1Q8N9T8 703 aaKnown RBP7.24□□□□□ -1.25
CDHR3-202ENST00000461766 FANCIQ9NVI1 1328 aa7.24□□□□□ -1.25
CDHR3-202ENST00000461766 PHF14O94880 888 aa7.23□□□□□ -1.25
CDHR3-202ENST00000461766 NEUROD2Q15784 382 aa7.23□□□□□ -1.25
CDHR3-202ENST00000461766 BIVM-ERCC5R4GMW8 1640 aa7.23□□□□□ -1.25
CDHR3-202ENST00000461766 KDM4FA0A1W2PPD8 638 aa7.22□□□□□ -1.25
CDHR3-202ENST00000461766 FCHSD2O94868 740 aa7.22□□□□□ -1.25
CDHR3-202ENST00000461766 HIC1Q14526 733 aa7.22□□□□□ -1.25
CDHR3-202ENST00000461766 DOK7Q18PE1 504 aa7.22□□□□□ -1.25
CDHR3-202ENST00000461766 EPAS1Q99814 870 aa7.22□□□□□ -1.25
CDHR3-202ENST00000461766 RBM19Q9Y4C8 960 aaKnown RBP7.22□□□□□ -1.25
CDHR3-202ENST00000461766 GNPATO15228 680 aa7.21□□□□□ -1.26
CDHR3-202ENST00000461766 EN1Q05925 392 aaPredicted RBP7.21□□□□□ -1.26
CDHR3-202ENST00000461766 ERICH6Q7L0X2 663 aa7.21□□□□□ -1.26
CDHR3-202ENST00000461766 TOP2BQ02880 1626 aa7.2□□□□□ -1.26
CDHR3-202ENST00000461766 CCER2I3L3R5 266 aa7.2□□□□□ -1.26
CDHR3-202ENST00000461766 HOXB3P14651 431 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-202ENST00000461766 MAP2K5Q13163 448 aa7.2□□□□□ -1.26
CDHR3-202ENST00000461766 PTGDRQ13258 359 aa7.2□□□□□ -1.26
CDHR3-202ENST00000461766 JPH4Q96JJ6 628 aa7.2□□□□□ -1.26
CDHR3-202ENST00000461766 PCDHGA10Q9Y5H3 936 aa7.2□□□□□ -1.26
CDHR3-202ENST00000461766 MINK1Q8N4C8 1332 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-202ENST00000461766 ARAP1Q96P48 1450 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 RAPGEF2Q9Y4G8 1499 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 MAP3K1Q13233 1512 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 TRIM66O15016 1216 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 EMP3P54852 163 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 TYW1BQ6NUM6 668 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 ZSWIM6Q9HCJ5 1215 aa7.19□□□□□ -1.26
CDHR3-202ENST00000461766 MAPKBP1O60336 1514 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 RIMBP2O15034 1052 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 MAP3K7O43318 606 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 MMRN1Q13201 1228 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 ERICH6BQ5W0A0 696 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 FBXW7Q969H0 707 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 CDHR5Q9HBB8 845 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 TIMELESSQ9UNS1 1208 aa7.18□□□□□ -1.26
CDHR3-202ENST00000461766 NCAPD3P42695 1498 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 NUDT7P0C024 238 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 FECHP22830 423 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 FOSBP53539 338 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 SPNS2Q8IVW8 549 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 CCDC102AQ96A19 550 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 ERCC6Q03468 1493 aa7.17□□□□□ -1.26
CDHR3-202ENST00000461766 IRF6O14896 467 aa7.16□□□□□ -1.26
CDHR3-202ENST00000461766 PDE4DQ08499 809 aa7.16□□□□□ -1.26
CDHR3-202ENST00000461766 ARSIQ5FYB1 569 aa7.16□□□□□ -1.26
CDHR3-202ENST00000461766 GPR153Q6NV75 609 aa7.16□□□□□ -1.26
CDHR3-202ENST00000461766 KHSRPQ92945 711 aaKnown RBP eCLIP7.16□□□□□ -1.26
CDHR3-202ENST00000461766 RBM33Q96EV2 1170 aaKnown RBP7.16□□□□□ -1.26
CDHR3-202ENST00000461766 CCNB3Q8WWL7 1395 aa7.16□□□□□ -1.26
CDHR3-202ENST00000461766 TSR1Q2NL82 804 aaKnown RBP7.15□□□□□ -1.26
CDHR3-202ENST00000461766 ZNF710Q8N1W2 664 aa7.15□□□□□ -1.26
CDHR3-202ENST00000461766 GPBP1L1Q9HC44 474 aaPredicted RBP7.15□□□□□ -1.26
CDHR3-202ENST00000461766 NPDC1Q9NQX5 325 aaPredicted RBP7.15□□□□□ -1.26
CDHR3-202ENST00000461766 PRXQ9BXM0 1461 aa7.15□□□□□ -1.27
CDHR3-202ENST00000461766 WDR97A6NE52 1622 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms