RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 SLC34A2O95436 690 aa9.26□□□□□ -0.93
BRCA1-206ENST00000461574 CUX1P39880 1505 aa9.26□□□□□ -0.93
BRCA1-206ENST00000461574 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
BRCA1-206ENST00000461574 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
BRCA1-206ENST00000461574 POTEEQ6S8J3 1075 aa9.22□□□□□ -0.93
BRCA1-206ENST00000461574 HS6ST3Q8IZP7 471 aa9.22□□□□□ -0.93
BRCA1-206ENST00000461574 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
BRCA1-206ENST00000461574 PTGER2P43116 358 aa9.2□□□□□ -0.94
BRCA1-206ENST00000461574 AXIN2Q9Y2T1 843 aa9.2□□□□□ -0.94
BRCA1-206ENST00000461574 ERCC6L2Q5T890 1561 aa9.2□□□□□ -0.94
BRCA1-206ENST00000461574 GRIN2AQ12879 1464 aa9.19□□□□□ -0.94
BRCA1-206ENST00000461574 KIF13AQ9H1H9 1805 aa9.19□□□□□ -0.94
BRCA1-206ENST00000461574 ADAMTS12P58397 1594 aa9.18□□□□□ -0.94
BRCA1-206ENST00000461574 CEP170Q5SW79 1584 aa9.18□□□□□ -0.94
BRCA1-206ENST00000461574 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
BRCA1-206ENST00000461574 CHGAP10645 457 aaKnown RBP9.17□□□□□ -0.94
BRCA1-206ENST00000461574 PBX2P40425 430 aa9.17□□□□□ -0.94
BRCA1-206ENST00000461574 KDM4FA0A1W2PPD8 638 aa9.16□□□□□ -0.94
BRCA1-206ENST00000461574 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
BRCA1-206ENST00000461574 PTCD2Q8WV60 388 aaKnown RBP9.16□□□□□ -0.94
BRCA1-206ENST00000461574 FOXK1P85037 733 aa9.15□□□□□ -0.94
BRCA1-206ENST00000461574 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-206ENST00000461574 SHROOM2Q13796 1616 aa9.15□□□□□ -0.94
BRCA1-206ENST00000461574 DSG2Q14126 1118 aa9.13□□□□□ -0.95
BRCA1-206ENST00000461574 NKX1-1Q15270 411 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-206ENST00000461574 NUP160Q12769 1436 aa9.12□□□□□ -0.95
BRCA1-206ENST00000461574 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
BRCA1-206ENST00000461574 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-206ENST00000461574 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
BRCA1-206ENST00000461574 FHAD1B1AJZ9 1412 aa9.1□□□□□ -0.95
BRCA1-206ENST00000461574 BIVM-ERCC5R4GMW8 1640 aa9.09□□□□□ -0.95
BRCA1-206ENST00000461574 KDM6BO15054 1643 aa9.09□□□□□ -0.95
BRCA1-206ENST00000461574 PRG4Q92954 1404 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-206ENST00000461574 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
BRCA1-206ENST00000461574 ERICH3Q5RHP9 1530 aa9.08□□□□□ -0.96
BRCA1-206ENST00000461574 TSPOAP1O95153 1857 aa9.08□□□□□ -0.96
BRCA1-206ENST00000461574 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
BRCA1-206ENST00000461574 PSEN2P49810 448 aa9.07□□□□□ -0.96
BRCA1-206ENST00000461574 DMRTA1Q5VZB9 504 aa9.07□□□□□ -0.96
BRCA1-206ENST00000461574 RUSC2Q8N2Y8 1516 aa9.06□□□□□ -0.96
BRCA1-206ENST00000461574 FAM69CQ0P6D2 419 aa9.06□□□□□ -0.96
BRCA1-206ENST00000461574 DIP2BQ9P265 1576 aa9.06□□□□□ -0.96
BRCA1-206ENST00000461574 ABCC10Q5T3U5 1492 aa9.05□□□□□ -0.96
BRCA1-206ENST00000461574 TBC1D12O60347 775 aa9.05□□□□□ -0.96
BRCA1-206ENST00000461574 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
BRCA1-206ENST00000461574 PPP4R3BQ5MIZ7 849 aa9.04□□□□□ -0.96
BRCA1-206ENST00000461574 ADCY10Q96PN6 1610 aa9.03□□□□□ -0.96
BRCA1-206ENST00000461574 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
BRCA1-206ENST00000461574 UPF1Q92900 1129 aaKnown RBP eCLIP9.03□□□□□ -0.96
BRCA1-206ENST00000461574 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
BRCA1-206ENST00000461574 TK2O00142 265 aa9.02□□□□□ -0.97
BRCA1-206ENST00000461574 JPH4Q96JJ6 628 aa9.02□□□□□ -0.97
BRCA1-206ENST00000461574 HRO43593 1189 aa9.01□□□□□ -0.97
BRCA1-206ENST00000461574 RYDENQ9NUL5 291 aaKnown RBP9.01□□□□□ -0.97
BRCA1-206ENST00000461574 HCSTQ9UBK5 93 aa9□□□□□ -0.97
BRCA1-206ENST00000461574 SUPT5HO00267 1087 aaKnown RBP8.99□□□□□ -0.97
BRCA1-206ENST00000461574 PPP1R15BQ5SWA1 713 aa8.99□□□□□ -0.97
BRCA1-206ENST00000461574 KCNK17Q96T54 332 aa8.99□□□□□ -0.97
BRCA1-206ENST00000461574 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
BRCA1-206ENST00000461574 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
BRCA1-206ENST00000461574 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-206ENST00000461574 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
BRCA1-206ENST00000461574 CUL7Q14999 1698 aa8.96□□□□□ -0.98
BRCA1-206ENST00000461574 PDE4AP27815 886 aa8.95□□□□□ -0.98
BRCA1-206ENST00000461574 TTBK1Q5TCY1 1321 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-206ENST00000461574 KCTD12Q96CX2 325 aaKnown RBP8.94□□□□□ -0.98
BRCA1-206ENST00000461574 KCNH8Q96L42 1107 aa8.94□□□□□ -0.98
BRCA1-206ENST00000461574 KIAA0586Q9BVV6 1533 aa8.94□□□□□ -0.98
BRCA1-206ENST00000461574 VPS9D1Q9Y2B5 631 aa8.93□□□□□ -0.98
BRCA1-206ENST00000461574 ADGRL1O94910 1474 aa8.93□□□□□ -0.98
BRCA1-206ENST00000461574 FOSBP53539 338 aa8.92□□□□□ -0.98
BRCA1-206ENST00000461574 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
BRCA1-206ENST00000461574 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
BRCA1-206ENST00000461574 BCL2L12Q9HB09 334 aa8.92□□□□□ -0.98
BRCA1-206ENST00000461574 PPRC1Q5VV67 1664 aaKnown RBP8.91□□□□□ -0.98
BRCA1-206ENST00000461574 PTPRGP23470 1445 aa8.9□□□□□ -0.98
BRCA1-206ENST00000461574 CARMIL2Q6F5E8 1435 aa8.9□□□□□ -0.98
BRCA1-206ENST00000461574 EVI5O60447 810 aa8.9□□□□□ -0.98
BRCA1-206ENST00000461574 ANO8Q9HCE9 1232 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-206ENST00000461574 ABCC2Q92887 1545 aa8.9□□□□□ -0.99
BRCA1-206ENST00000461574 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
BRCA1-206ENST00000461574 GLI2P10070 1586 aa8.89□□□□□ -0.99
BRCA1-206ENST00000461574 HECW2Q9P2P5 1572 aa8.89□□□□□ -0.99
BRCA1-206ENST00000461574 PLB1Q6P1J6 1458 aa8.89□□□□□ -0.99
BRCA1-206ENST00000461574 ASXL2Q76L83 1435 aa8.88□□□□□ -0.99
BRCA1-206ENST00000461574 KIF27Q86VH2 1401 aa8.88□□□□□ -0.99
BRCA1-206ENST00000461574 IQGAP2Q13576 1575 aa8.87□□□□□ -0.99
BRCA1-206ENST00000461574 PTPREP23469 700 aa8.87□□□□□ -0.99
BRCA1-206ENST00000461574 MFSD10Q14728 455 aa8.87□□□□□ -0.99
BRCA1-206ENST00000461574 SLC4A5Q9BY07 1137 aa8.87□□□□□ -0.99
BRCA1-206ENST00000461574 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
BRCA1-206ENST00000461574 TNIKQ9UKE5 1360 aa8.86□□□□□ -0.99
BRCA1-206ENST00000461574 TEX14Q8IWB6 1497 aa8.86□□□□□ -0.99
BRCA1-206ENST00000461574 ADAM33Q9BZ11 813 aa8.86□□□□□ -0.99
BRCA1-206ENST00000461574 BHMG1C9JSJ3 638 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-206ENST00000461574 PTPN5P54829 565 aa8.85□□□□□ -0.99
BRCA1-206ENST00000461574 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
BRCA1-206ENST00000461574 CADPS2Q86UW7 1296 aa8.85□□□□□ -0.99
BRCA1-206ENST00000461574 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
BRCA1-206ENST00000461574 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms