RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ZNF787Q6DD87 383 aa11.61□□□□□ -0.55
CCT4-203ENST00000461540 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
CCT4-203ENST00000461540 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
CCT4-203ENST00000461540 PDE4AP27815 886 aa11.59□□□□□ -0.55
CCT4-203ENST00000461540 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
CCT4-203ENST00000461540 TSR3Q9UJK0 312 aaKnown RBP11.59□□□□□ -0.55
CCT4-203ENST00000461540 PCDHGA10Q9Y5H3 936 aa11.59□□□□□ -0.55
CCT4-203ENST00000461540 SEPT9Q9UHD8 586 aaPredicted RBP11.58□□□□□ -0.56
CCT4-203ENST00000461540 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
CCT4-203ENST00000461540 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
CCT4-203ENST00000461540 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
CCT4-203ENST00000461540 ONECUT3O60422 494 aaPredicted RBP11.56□□□□□ -0.56
CCT4-203ENST00000461540 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
CCT4-203ENST00000461540 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
CCT4-203ENST00000461540 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
CCT4-203ENST00000461540 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
CCT4-203ENST00000461540 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
CCT4-203ENST00000461540 NCKAP5LQ9HCH0 1330 aa11.53□□□□□ -0.56
CCT4-203ENST00000461540 PHF14O94880 888 aa11.51□□□□□ -0.57
CCT4-203ENST00000461540 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
CCT4-203ENST00000461540 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
CCT4-203ENST00000461540 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
CCT4-203ENST00000461540 PPP4CP60510 307 aa11.47□□□□□ -0.57
CCT4-203ENST00000461540 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
CCT4-203ENST00000461540 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
CCT4-203ENST00000461540 C6orf132Q5T0Z8 1188 aa11.46□□□□□ -0.57
CCT4-203ENST00000461540 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
CCT4-203ENST00000461540 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
CCT4-203ENST00000461540 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
CCT4-203ENST00000461540 NKX1-1Q15270 411 aaPredicted RBP11.42□□□□□ -0.58
CCT4-203ENST00000461540 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
CCT4-203ENST00000461540 EPAS1Q99814 870 aa11.41□□□□□ -0.58
CCT4-203ENST00000461540 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
CCT4-203ENST00000461540 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
CCT4-203ENST00000461540 MTRQ99707 1265 aa11.39□□□□□ -0.59
CCT4-203ENST00000461540 DNAJC5Q9H3Z4 198 aa11.38□□□□□ -0.59
CCT4-203ENST00000461540 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
CCT4-203ENST00000461540 MFSD10Q14728 455 aa11.36□□□□□ -0.59
CCT4-203ENST00000461540 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
CCT4-203ENST00000461540 GGCXP38435 758 aa11.31□□□□□ -0.6
CCT4-203ENST00000461540 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
CCT4-203ENST00000461540 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
CCT4-203ENST00000461540 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
CCT4-203ENST00000461540 PKDCCQ504Y2 493 aa11.27□□□□□ -0.61
CCT4-203ENST00000461540 SMAPO00193 183 aa11.24□□□□□ -0.61
CCT4-203ENST00000461540 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
CCT4-203ENST00000461540 DDX12PQ92771 950 aa11.23□□□□□ -0.61
CCT4-203ENST00000461540 RNF40O75150 1001 aa11.22□□□□□ -0.61
CCT4-203ENST00000461540 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
CCT4-203ENST00000461540 MAP3K7O43318 606 aa11.21□□□□□ -0.61
CCT4-203ENST00000461540 HDGFP51858 240 aaKnown RBP11.21□□□□□ -0.61
CCT4-203ENST00000461540 MYT1Q01538 1121 aa11.21□□□□□ -0.61
CCT4-203ENST00000461540 DPYSL4O14531 572 aa11.2□□□□□ -0.62
CCT4-203ENST00000461540 DGAT1O75907 488 aa11.2□□□□□ -0.62
CCT4-203ENST00000461540 POTECB2RU33 542 aa11.19□□□□□ -0.62
CCT4-203ENST00000461540 APLP1P51693 650 aa11.19□□□□□ -0.62
CCT4-203ENST00000461540 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
CCT4-203ENST00000461540 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
CCT4-203ENST00000461540 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
CCT4-203ENST00000461540 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
CCT4-203ENST00000461540 NBR1Q14596 966 aa11.18□□□□□ -0.62
CCT4-203ENST00000461540 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
CCT4-203ENST00000461540 TRIM67Q6ZTA4 783 aa11.18□□□□□ -0.62
CCT4-203ENST00000461540 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
CCT4-203ENST00000461540 PRSS12P56730 875 aa11.16□□□□□ -0.62
CCT4-203ENST00000461540 COPS2P61201 443 aa11.16□□□□□ -0.62
CCT4-203ENST00000461540 NECTIN2Q92692 538 aa11.16□□□□□ -0.62
CCT4-203ENST00000461540 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
CCT4-203ENST00000461540 SLC19A1P41440 591 aa11.15□□□□□ -0.62
CCT4-203ENST00000461540 TATDN2Q93075 761 aa11.15□□□□□ -0.62
CCT4-203ENST00000461540 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
CCT4-203ENST00000461540 CERKQ8TCT0 537 aa11.12□□□□□ -0.63
CCT4-203ENST00000461540 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
CCT4-203ENST00000461540 PRR20EP86478 221 aa11.11□□□□□ -0.63
CCT4-203ENST00000461540 PRR20CP86479 221 aa11.11□□□□□ -0.63
CCT4-203ENST00000461540 PRR20DP86480 221 aa11.11□□□□□ -0.63
CCT4-203ENST00000461540 PRR20BP86481 221 aa11.11□□□□□ -0.63
CCT4-203ENST00000461540 PRR20AP86496 221 aa11.11□□□□□ -0.63
CCT4-203ENST00000461540 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
CCT4-203ENST00000461540 ZPR1O75312 459 aa11.1□□□□□ -0.63
CCT4-203ENST00000461540 LCE2AQ5TA79 106 aaPredicted RBP11.1□□□□□ -0.63
CCT4-203ENST00000461540 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
CCT4-203ENST00000461540 ZNF598Q86UK7 904 aaKnown RBP11.09□□□□□ -0.63
CCT4-203ENST00000461540 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
CCT4-203ENST00000461540 RNF223E7ERA6 249 aa11.07□□□□□ -0.64
CCT4-203ENST00000461540 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
CCT4-203ENST00000461540 NUDT18Q6ZVK8 323 aa11.06□□□□□ -0.64
CCT4-203ENST00000461540 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
CCT4-203ENST00000461540 STK17AQ9UEE5 414 aa11.04□□□□□ -0.64
CCT4-203ENST00000461540 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
CCT4-203ENST00000461540 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
CCT4-203ENST00000461540 SLC4A3P48751 1232 aa11.02□□□□□ -0.65
CCT4-203ENST00000461540 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
CCT4-203ENST00000461540 ST8SIA5O15466 376 aa11.01□□□□□ -0.65
CCT4-203ENST00000461540 SWT1Q5T5J6 900 aaKnown RBP11.01□□□□□ -0.65
CCT4-203ENST00000461540 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
CCT4-203ENST00000461540 AAASQ9NRG9 546 aa11.01□□□□□ -0.65
CCT4-203ENST00000461540 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
CCT4-203ENST00000461540 WFS1O76024 890 aa11□□□□□ -0.65
CCT4-203ENST00000461540 PDIA6Q15084 440 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms