RNA–Protein interactions for RNA: ENST00000461384.6

GBP3-205, Transcript of guanylate binding protein 3, human

TSL 2

Gene GBP3, Length 702 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GBP3-205	ENST00000461384	EPAS1	Q99814	870 aa		9.43	□□□□□ -0.9
GBP3-205	ENST00000461384	ERCC6	Q03468	1493 aa		9.42	□□□□□ -0.9
GBP3-205	ENST00000461384	PCDHGA10	Q9Y5H3	936 aa		9.42	□□□□□ -0.9
GBP3-205	ENST00000461384	BICRA	Q9NZM4	1560 aa		9.41	□□□□□ -0.9
GBP3-205	ENST00000461384	ARHGAP33	O14559	1287 aa		9.39	□□□□□ -0.91
GBP3-205	ENST00000461384	PTPRE	P23469	700 aa		9.38	□□□□□ -0.91
GBP3-205	ENST00000461384	TMEM132A	Q24JP5	1023 aa		9.38	□□□□□ -0.91
GBP3-205	ENST00000461384	RBM33	Q96EV2	1170 aa	Known RBP	9.38	□□□□□ -0.91
GBP3-205	ENST00000461384	KCNK17	Q96T54	332 aa		9.38	□□□□□ -0.91
GBP3-205	ENST00000461384	BCL2L12	Q9HB09	334 aa		9.38	□□□□□ -0.91
GBP3-205	ENST00000461384	SEMA3E	O15041	775 aa		9.37	□□□□□ -0.91
GBP3-205	ENST00000461384	MAP3K7	O43318	606 aa		9.37	□□□□□ -0.91
GBP3-205	ENST00000461384	SMYD5	Q6GMV2	418 aa		9.37	□□□□□ -0.91
GBP3-205	ENST00000461384	ADAM33	Q9BZ11	813 aa		9.37	□□□□□ -0.91
GBP3-205	ENST00000461384	AXIN2	Q9Y2T1	843 aa		9.37	□□□□□ -0.91
GBP3-205	ENST00000461384	EIF4G1	Q04637	1599 aa	Known RBP	9.35	□□□□□ -0.91
GBP3-205	ENST00000461384	ANKRD13D	Q6ZTN6	518 aa		9.35	□□□□□ -0.91
GBP3-205	ENST00000461384	SHROOM4	Q9ULL8	1493 aa		9.34	□□□□□ -0.91
GBP3-205	ENST00000461384	MLLT3	P42568	568 aa	Predicted RBP	9.34	□□□□□ -0.91
GBP3-205	ENST00000461384	ERICH6	Q7L0X2	663 aa		9.34	□□□□□ -0.91
GBP3-205	ENST00000461384	PSEN2	P49810	448 aa		9.33	□□□□□ -0.92
GBP3-205	ENST00000461384	LSM11	P83369	360 aa	Known RBP eCLIP	9.33	□□□□□ -0.92
GBP3-205	ENST00000461384	EN1	Q05925	392 aa	Predicted RBP	9.33	□□□□□ -0.92
GBP3-205	ENST00000461384	KRTAP3-3	Q9BYR6	98 aa		9.33	□□□□□ -0.92
GBP3-205	ENST00000461384	KRTAP3-2	Q9BYR7	98 aa		9.33	□□□□□ -0.92
GBP3-205	ENST00000461384	OSBP	P22059	807 aa		9.32	□□□□□ -0.92
GBP3-205	ENST00000461384	C6orf132	Q5T0Z8	1188 aa		9.32	□□□□□ -0.92
GBP3-205	ENST00000461384	TESPA1	A2RU30	521 aa	Predicted RBP	9.31	□□□□□ -0.92
GBP3-205	ENST00000461384	LMOD2	Q6P5Q4	547 aa		9.31	□□□□□ -0.92
GBP3-205	ENST00000461384	POTEE	Q6S8J3	1075 aa		9.31	□□□□□ -0.92
GBP3-205	ENST00000461384	C14orf37	Q86TY3	774 aa		9.31	□□□□□ -0.92
GBP3-205	ENST00000461384	ARX	Q96QS3	562 aa		9.3	□□□□□ -0.92
GBP3-205	ENST00000461384	PPP1R3G	B7ZBB8	358 aa		9.29	□□□□□ -0.92
GBP3-205	ENST00000461384	TSR1	Q2NL82	804 aa	Known RBP	9.28	□□□□□ -0.92
GBP3-205	ENST00000461384	DMRTA1	Q5VZB9	504 aa		9.28	□□□□□ -0.92
GBP3-205	ENST00000461384	STAC3	Q96MF2	364 aa		9.28	□□□□□ -0.92
GBP3-205	ENST00000461384	NUTM2F	A1L443	756 aa		9.27	□□□□□ -0.93
GBP3-205	ENST00000461384	TK2	O00142	265 aa		9.27	□□□□□ -0.93
GBP3-205	ENST00000461384	CERK	Q8TCT0	537 aa		9.27	□□□□□ -0.93
GBP3-205	ENST00000461384	ADGRD1	Q6QNK2	874 aa		9.26	□□□□□ -0.93
GBP3-205	ENST00000461384	COL9A1	P20849	921 aa		9.25	□□□□□ -0.93
GBP3-205	ENST00000461384	PRIM1	P49642	420 aa	Known RBP	9.25	□□□□□ -0.93
GBP3-205	ENST00000461384	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
GBP3-205	ENST00000461384	ZBED2	Q9BTP6	218 aa		9.24	□□□□□ -0.93
GBP3-205	ENST00000461384	SLC4A5	Q9BY07	1137 aa		9.24	□□□□□ -0.93
GBP3-205	ENST00000461384	VPS9D1	Q9Y2B5	631 aa		9.23	□□□□□ -0.93
GBP3-205	ENST00000461384	RBM26	Q5T8P6	1007 aa	Known RBP	9.22	□□□□□ -0.93
GBP3-205	ENST00000461384	CDHR5	Q9HBB8	845 aa		9.22	□□□□□ -0.93
GBP3-205	ENST00000461384	SPNS2	Q8IVW8	549 aa		9.21	□□□□□ -0.94
GBP3-205	ENST00000461384	BRPF1	P55201	1214 aa	Predicted RBP	9.2	□□□□□ -0.94
GBP3-205	ENST00000461384	PRSS12	P56730	875 aa		9.2	□□□□□ -0.94
GBP3-205	ENST00000461384	PROX2	Q3B8N5	592 aa		9.2	□□□□□ -0.94
GBP3-205	ENST00000461384	PACS2	Q86VP3	889 aa		9.2	□□□□□ -0.94
GBP3-205	ENST00000461384	NBPF3	Q9H094	633 aa		9.2	□□□□□ -0.94
GBP3-205	ENST00000461384	TRIM6-TRIM34	B2RNG4	842 aa		9.19	□□□□□ -0.94
GBP3-205	ENST00000461384	FCHSD2	O94868	740 aa		9.19	□□□□□ -0.94
GBP3-205	ENST00000461384	CDCA7L	Q96GN5	454 aa		9.19	□□□□□ -0.94
GBP3-205	ENST00000461384	ONECUT3	O60422	494 aa	Predicted RBP	9.18	□□□□□ -0.94
GBP3-205	ENST00000461384	PLSCR2	Q9NRY7	297 aa		9.18	□□□□□ -0.94
GBP3-205	ENST00000461384	KIAA1468	Q9P260	1216 aa		9.18	□□□□□ -0.94
GBP3-205	ENST00000461384	DAXX	Q9UER7	740 aa	Predicted RBP	9.18	□□□□□ -0.94
GBP3-205	ENST00000461384	RABGEF1	Q9UJ41	708 aa		9.18	□□□□□ -0.94
GBP3-205	ENST00000461384	GOLGA8CP	A6NN73	597 aa		9.17	□□□□□ -0.94
GBP3-205	ENST00000461384	GPIHBP1	Q8IV16	184 aa		9.17	□□□□□ -0.94
GBP3-205	ENST00000461384	MRPL50	Q8N5N7	158 aa	Known RBP	9.17	□□□□□ -0.94
GBP3-205	ENST00000461384	MYT1L	Q9UL68	1186 aa		9.17	□□□□□ -0.94
GBP3-205	ENST00000461384	HR	O43593	1189 aa		9.16	□□□□□ -0.94
GBP3-205	ENST00000461384	PTGDR	Q13258	359 aa		9.16	□□□□□ -0.94
GBP3-205	ENST00000461384	HOMEZ	Q8IX15	550 aa		9.16	□□□□□ -0.94
GBP3-205	ENST00000461384	NPDC1	Q9NQX5	325 aa	Predicted RBP	9.16	□□□□□ -0.94
GBP3-205	ENST00000461384	RBM27	Q9P2N5	1060 aa	Known RBP	9.16	□□□□□ -0.94
GBP3-205	ENST00000461384	HIC1	Q14526	733 aa		9.14	□□□□□ -0.95
GBP3-205	ENST00000461384	NEUROD2	Q15784	382 aa		9.14	□□□□□ -0.95
GBP3-205	ENST00000461384	NBPF26	B4DH59	902 aa		9.13	□□□□□ -0.95
GBP3-205	ENST00000461384	PADI6	Q6TGC4	694 aa		9.13	□□□□□ -0.95
GBP3-205	ENST00000461384	ZC3H15	Q8WU90	426 aa	Known RBP	9.13	□□□□□ -0.95
GBP3-205	ENST00000461384	TSKS	Q9UJT2	592 aa		9.13	□□□□□ -0.95
GBP3-205	ENST00000461384	MMRN1	Q13201	1228 aa		9.12	□□□□□ -0.95
GBP3-205	ENST00000461384	BHMG1	C9JSJ3	638 aa	Predicted RBP	9.11	□□□□□ -0.95
GBP3-205	ENST00000461384	GNPAT	O15228	680 aa		9.11	□□□□□ -0.95
GBP3-205	ENST00000461384	LAPTM4B	Q86VI4	370 aa		9.11	□□□□□ -0.95
GBP3-205	ENST00000461384	RNF166	Q96A37	237 aa	Predicted RBP	9.11	□□□□□ -0.95
GBP3-205	ENST00000461384	SEPT9	Q9UHD8	586 aa	Predicted RBP	9.11	□□□□□ -0.95
GBP3-205	ENST00000461384	PNMA3	Q9UL41	463 aa		9.11	□□□□□ -0.95
GBP3-205	ENST00000461384	TATDN2	Q93075	761 aa		9.1	□□□□□ -0.95
GBP3-205	ENST00000461384	NUDT18	Q6ZVK8	323 aa		9.09	□□□□□ -0.95
GBP3-205	ENST00000461384	SLC24A3	Q9HC58	644 aa		9.09	□□□□□ -0.95
GBP3-205	ENST00000461384	FAM98C	Q17RN3	349 aa	Known RBP	9.08	□□□□□ -0.96
GBP3-205	ENST00000461384	TTC13	Q8NBP0	860 aa		9.08	□□□□□ -0.96
GBP3-205	ENST00000461384	KCTD12	Q96CX2	325 aa	Known RBP	9.08	□□□□□ -0.96
GBP3-205	ENST00000461384	FAM198A	Q9UFP1	575 aa		9.08	□□□□□ -0.96
GBP3-205	ENST00000461384	SMAP	O00193	183 aa		9.07	□□□□□ -0.96
GBP3-205	ENST00000461384	HDGF	P51858	240 aa	Known RBP	9.07	□□□□□ -0.96
GBP3-205	ENST00000461384	ANKK1	Q8NFD2	765 aa		9.07	□□□□□ -0.96
GBP3-205	ENST00000461384	RBM46	Q8TBY0	533 aa	Known RBP	9.07	□□□□□ -0.96
GBP3-205	ENST00000461384	WNT2B	Q93097	391 aa		9.07	□□□□□ -0.96
GBP3-205	ENST00000461384	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	9.06	□□□□□ -0.96
GBP3-205	ENST00000461384	RIMBP3C	A6NJZ7	1639 aa		9.05	□□□□□ -0.96
GBP3-205	ENST00000461384	RIMBP3B	A6NNM3	1639 aa		9.05	□□□□□ -0.96
GBP3-205	ENST00000461384	RIMBP3	Q9UFD9	1639 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms