RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 FAM135AQ9P2D6 1515 aa10.71□□□□□ -0.69
LSG1-205ENST00000461343 KDM6BO15054 1643 aa10.7□□□□□ -0.7
LSG1-205ENST00000461343 ANKRD30BQ9BXX2 1392 aa10.7□□□□□ -0.7
LSG1-205ENST00000461343 RPRD2Q5VT52 1461 aaKnown RBP10.69□□□□□ -0.7
LSG1-205ENST00000461343 PKD2Q13563 968 aa10.69□□□□□ -0.7
LSG1-205ENST00000461343 BCORL1Q5H9F3 1711 aa10.69□□□□□ -0.7
LSG1-205ENST00000461343 DEPDC5O75140 1603 aa10.69□□□□□ -0.7
LSG1-205ENST00000461343 KIDINS220Q9ULH0 1771 aa10.68□□□□□ -0.7
LSG1-205ENST00000461343 STAC3Q96MF2 364 aa10.68□□□□□ -0.7
LSG1-205ENST00000461343 PPP6R1Q9UPN7 881 aa10.68□□□□□ -0.7
LSG1-205ENST00000461343 PRDM15P57071 1507 aaPredicted RBP10.68□□□□□ -0.7
LSG1-205ENST00000461343 RICTORQ6R327 1708 aa10.67□□□□□ -0.7
LSG1-205ENST00000461343 NEUROD1Q13562 356 aa10.67□□□□□ -0.7
LSG1-205ENST00000461343 ATP10AO60312 1499 aa10.67□□□□□ -0.7
LSG1-205ENST00000461343 RNF17Q9BXT8 1623 aaKnown RBP10.66□□□□□ -0.7
LSG1-205ENST00000461343 REREQ9P2R6 1566 aa10.66□□□□□ -0.7
LSG1-205ENST00000461343 CCDC144AA2RUR9 1427 aa10.66□□□□□ -0.7
LSG1-205ENST00000461343 TET3O43151 1660 aa10.65□□□□□ -0.7
LSG1-205ENST00000461343 KIF13AQ9H1H9 1805 aa10.65□□□□□ -0.71
LSG1-205ENST00000461343 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
LSG1-205ENST00000461343 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
LSG1-205ENST00000461343 KIF3BO15066 747 aa10.64□□□□□ -0.71
LSG1-205ENST00000461343 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
LSG1-205ENST00000461343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.63□□□□□ -0.715e-6■□□□□ 9.8
LSG1-205ENST00000461343 VWDEQ8N2E2 1590 aa10.63□□□□□ -0.71
LSG1-205ENST00000461343 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
LSG1-205ENST00000461343 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
LSG1-205ENST00000461343 AGLP35573 1532 aa10.62□□□□□ -0.71
LSG1-205ENST00000461343 TSPOAP1O95153 1857 aa10.61□□□□□ -0.71
LSG1-205ENST00000461343 DIP2CQ9Y2E4 1556 aa10.61□□□□□ -0.71
LSG1-205ENST00000461343 RAPGEF3O95398 923 aa10.61□□□□□ -0.71
LSG1-205ENST00000461343 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
LSG1-205ENST00000461343 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
LSG1-205ENST00000461343 ABCA6Q8N139 1617 aa10.61□□□□□ -0.71
LSG1-205ENST00000461343 NEURL4Q96JN8 1562 aa10.6□□□□□ -0.71
LSG1-205ENST00000461343 TRPM2O94759 1503 aa10.59□□□□□ -0.71
LSG1-205ENST00000461343 EFCAB6Q5THR3 1501 aa10.59□□□□□ -0.71
LSG1-205ENST00000461343 FRMPD1Q5SYB0 1578 aa10.59□□□□□ -0.71
LSG1-205ENST00000461343 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.71
LSG1-205ENST00000461343 PTPRTO14522 1441 aa10.58□□□□□ -0.72
LSG1-205ENST00000461343 ARHGEF40Q8TER5 1519 aa10.58□□□□□ -0.72
LSG1-205ENST00000461343 ARHGAP31Q2M1Z3 1444 aa10.58□□□□□ -0.72
LSG1-205ENST00000461343 CNTLNQ9NXG0 1405 aa10.57□□□□□ -0.72
LSG1-205ENST00000461343 SPHKAPQ2M3C7 1700 aa10.56□□□□□ -0.72
LSG1-205ENST00000461343 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
LSG1-205ENST00000461343 MROH1Q8NDA8 1641 aa10.55□□□□□ -0.72
LSG1-205ENST00000461343 L3MBTL2Q969R5 705 aa10.55□□□□□ -0.72
LSG1-205ENST00000461343 UHRF1BP1Q6BDS2 1440 aa10.55□□□□□ -0.72
LSG1-205ENST00000461343 ABCC3O15438 1527 aa10.54□□□□□ -0.72
LSG1-205ENST00000461343 E9PCH4 1651 aa10.54□□□□□ -0.72
LSG1-205ENST00000461343 TRHP20396 242 aaPredicted RBP10.54□□□□□ -0.72
LSG1-205ENST00000461343 GGT6Q6P531 493 aa10.54□□□□□ -0.72
LSG1-205ENST00000461343 YEATS2Q9ULM3 1422 aa10.53□□□□□ -0.72
LSG1-205ENST00000461343 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
LSG1-205ENST00000461343 EIF4G2P78344 907 aaKnown RBP eCLIP10.52□□□□□ -0.73
LSG1-205ENST00000461343 SLC52A1Q9NWF4 448 aa10.52□□□□□ -0.73
LSG1-205ENST00000461343 RPGRIP1LQ68CZ1 1315 aa10.52□□□□□ -0.73
LSG1-205ENST00000461343 CAMSAP1Q5T5Y3 1602 aa10.51□□□□□ -0.73
LSG1-205ENST00000461343 CEP152O94986 1710 aa10.51□□□□□ -0.73
LSG1-205ENST00000461343 PLA2R1Q13018 1463 aa10.5□□□□□ -0.73
LSG1-205ENST00000461343 NPATQ14207 1427 aa10.5□□□□□ -0.73
LSG1-205ENST00000461343 RALGAPBQ86X10 1494 aa10.49□□□□□ -0.73
LSG1-205ENST00000461343 KIF1BO60333 1816 aa10.49□□□□□ -0.73
LSG1-205ENST00000461343 DIEXFQ68CQ4 756 aaKnown RBP10.49□□□□□ -0.73
LSG1-205ENST00000461343 DCAF11Q8TEB1 546 aa10.49□□□□□ -0.73
LSG1-205ENST00000461343 ARID4BQ4LE39 1312 aaPredicted RBP10.48□□□□□ -0.73
LSG1-205ENST00000461343 NOS1P29475 1434 aa10.48□□□□□ -0.73
LSG1-205ENST00000461343 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
LSG1-205ENST00000461343 PRAG1Q86YV5 1406 aa10.46□□□□□ -0.74
LSG1-205ENST00000461343 MYOM2P54296 1465 aa10.46□□□□□ -0.74
LSG1-205ENST00000461343 LAMC1P11047 1609 aa10.46□□□□□ -0.74
LSG1-205ENST00000461343 CLTCL1P53675 1640 aa10.45□□□□□ -0.74
LSG1-205ENST00000461343 COL17A1Q9UMD9 1497 aaPredicted RBP10.45□□□□□ -0.74
LSG1-205ENST00000461343 ROCK2O75116 1388 aaKnown RBP10.45□□□□□ -0.74
LSG1-205ENST00000461343 EIF3AQ14152 1382 aaKnown RBP10.45□□□□□ -0.74
LSG1-205ENST00000461343 HDGFP51858 240 aaKnown RBP10.45□□□□□ -0.74
LSG1-205ENST00000461343 MROH2AA6NES4 1674 aa10.44□□□□□ -0.74
LSG1-205ENST00000461343 CARD11Q9BXL7 1154 aa10.44□□□□□ -0.74
LSG1-205ENST00000461343 ADGRB3O60242 1522 aa10.43□□□□□ -0.74
LSG1-205ENST00000461343 GPRASP1Q5JY77 1395 aa10.43□□□□□ -0.74
LSG1-205ENST00000461343 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
LSG1-205ENST00000461343 RGL3Q3MIN7 710 aa10.43□□□□□ -0.74
LSG1-205ENST00000461343 KIAA1210Q9ULL0 1709 aa10.43□□□□□ -0.74
LSG1-205ENST00000461343 PIK3C2BO00750 1634 aa10.43□□□□□ -0.74
LSG1-205ENST00000461343 PREX1Q8TCU6 1659 aa10.42□□□□□ -0.74
LSG1-205ENST00000461343 ZNF326Q5BKZ1 582 aaKnown RBP10.42□□□□□ -0.74
LSG1-205ENST00000461343 ERVK-7P63135 1459 aa10.42□□□□□ -0.74
LSG1-205ENST00000461343 USP47Q96K76 1375 aa10.41□□□□□ -0.74
LSG1-205ENST00000461343 CDCA8Q53HL2 280 aa10.41□□□□□ -0.74
LSG1-205ENST00000461343 KDM2AQ9Y2K7 1162 aa10.41□□□□□ -0.74
LSG1-205ENST00000461343 ZFYVE9O95405 1425 aa10.41□□□□□ -0.74
LSG1-205ENST00000461343 SPATA31D1Q6ZQQ2 1576 aa10.4□□□□□ -0.74
LSG1-205ENST00000461343 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.4□□□□□ -0.74
LSG1-205ENST00000461343 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
LSG1-205ENST00000461343 KDM5AP29375 1690 aaKnown RBP10.4□□□□□ -0.74
LSG1-205ENST00000461343 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
LSG1-205ENST00000461343 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.75
LSG1-205ENST00000461343 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
LSG1-205ENST00000461343 NBPF8Q3BBV2 869 aa10.39□□□□□ -0.75
LSG1-205ENST00000461343 ZMYM3Q14202 1370 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms