RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 PTGDRQ13258 359 aa13.28□□□□□ -0.28
CHL1-209ENST00000461289 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
CHL1-209ENST00000461289 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
CHL1-209ENST00000461289 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
CHL1-209ENST00000461289 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
CHL1-209ENST00000461289 TSR1Q2NL82 804 aaKnown RBP13.25□□□□□ -0.29
CHL1-209ENST00000461289 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
CHL1-209ENST00000461289 TRIM66O15016 1216 aa13.23□□□□□ -0.29
CHL1-209ENST00000461289 IRF6O14896 467 aa13.22□□□□□ -0.29
CHL1-209ENST00000461289 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
CHL1-209ENST00000461289 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
CHL1-209ENST00000461289 FECHP22830 423 aa13.21□□□□□ -0.29
CHL1-209ENST00000461289 TMEM132AQ24JP5 1023 aa13.21□□□□□ -0.29
CHL1-209ENST00000461289 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
CHL1-209ENST00000461289 PDE4DQ08499 809 aa13.19□□□□□ -0.3
CHL1-209ENST00000461289 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
CHL1-209ENST00000461289 CERKQ8TCT0 537 aa13.19□□□□□ -0.3
CHL1-209ENST00000461289 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
CHL1-209ENST00000461289 ADAM33Q9BZ11 813 aa13.18□□□□□ -0.3
CHL1-209ENST00000461289 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
CHL1-209ENST00000461289 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
CHL1-209ENST00000461289 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
CHL1-209ENST00000461289 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
CHL1-209ENST00000461289 KDM4CQ9H3R0 1056 aa13.12□□□□□ -0.31
CHL1-209ENST00000461289 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
CHL1-209ENST00000461289 PTPREP23469 700 aa13.1□□□□□ -0.31
CHL1-209ENST00000461289 PADI6Q6TGC4 694 aa13.1□□□□□ -0.31
CHL1-209ENST00000461289 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
CHL1-209ENST00000461289 AMHR2Q16671 573 aa13.09□□□□□ -0.31
CHL1-209ENST00000461289 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
CHL1-209ENST00000461289 PRSS12P56730 875 aa13.06□□□□□ -0.32
CHL1-209ENST00000461289 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
CHL1-209ENST00000461289 ST18O60284 1047 aa13.05□□□□□ -0.32
CHL1-209ENST00000461289 OATP04181 439 aa13.05□□□□□ -0.32
CHL1-209ENST00000461289 PARP9Q8IXQ6 854 aa13.05□□□□□ -0.32
CHL1-209ENST00000461289 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
CHL1-209ENST00000461289 ERBB3P21860 1342 aa13.05□□□□□ -0.32
CHL1-209ENST00000461289 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
CHL1-209ENST00000461289 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
CHL1-209ENST00000461289 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
CHL1-209ENST00000461289 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
CHL1-209ENST00000461289 COL9A1P20849 921 aa13.02□□□□□ -0.33
CHL1-209ENST00000461289 CLCN1P35523 988 aa13.01□□□□□ -0.33
CHL1-209ENST00000461289 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
CHL1-209ENST00000461289 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
CHL1-209ENST00000461289 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
CHL1-209ENST00000461289 ADGRG1Q9Y653 693 aa13□□□□□ -0.33
CHL1-209ENST00000461289 EMP3P54852 163 aa12.99□□□□□ -0.33
CHL1-209ENST00000461289 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
CHL1-209ENST00000461289 METTL3Q86U44 580 aaKnown RBP12.99□□□□□ -0.33
CHL1-209ENST00000461289 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
CHL1-209ENST00000461289 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
CHL1-209ENST00000461289 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
CHL1-209ENST00000461289 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
CHL1-209ENST00000461289 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
CHL1-209ENST00000461289 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
CHL1-209ENST00000461289 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
CHL1-209ENST00000461289 PXYLP1Q8TE99 480 aa12.95□□□□□ -0.34
CHL1-209ENST00000461289 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
CHL1-209ENST00000461289 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
CHL1-209ENST00000461289 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
CHL1-209ENST00000461289 NLRP7Q8WX94 980 aa12.92□□□□□ -0.34
CHL1-209ENST00000461289 TSKSQ9UJT2 592 aa12.92□□□□□ -0.34
CHL1-209ENST00000461289 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
CHL1-209ENST00000461289 FAM205CA6NFA0 338 aa12.9□□□□□ -0.34
CHL1-209ENST00000461289 ARHGAP33O14559 1287 aa12.9□□□□□ -0.34
CHL1-209ENST00000461289 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
CHL1-209ENST00000461289 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
CHL1-209ENST00000461289 FAM198AQ9UFP1 575 aa12.9□□□□□ -0.34
CHL1-209ENST00000461289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
CHL1-209ENST00000461289 PSEN2P49810 448 aa12.89□□□□□ -0.35
CHL1-209ENST00000461289 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
CHL1-209ENST00000461289 MS4A1P11836 297 aa12.88□□□□□ -0.35
CHL1-209ENST00000461289 SSTR3P32745 418 aaPredicted RBP12.88□□□□□ -0.35
CHL1-209ENST00000461289 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
CHL1-209ENST00000461289 TATDN2Q93075 761 aa12.88□□□□□ -0.35
CHL1-209ENST00000461289 RCCD1A6NED2 376 aa12.87□□□□□ -0.35
CHL1-209ENST00000461289 PBX2P40425 430 aa12.87□□□□□ -0.35
CHL1-209ENST00000461289 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
CHL1-209ENST00000461289 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
CHL1-209ENST00000461289 EYA1Q99502 592 aa12.85□□□□□ -0.35
CHL1-209ENST00000461289 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
CHL1-209ENST00000461289 KIAA1468Q9P260 1216 aa12.85□□□□□ -0.35
CHL1-209ENST00000461289 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
CHL1-209ENST00000461289 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
CHL1-209ENST00000461289 DNAJB2P25686 324 aa12.84□□□□□ -0.35
CHL1-209ENST00000461289 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
CHL1-209ENST00000461289 FAM217BQ9NTX9 383 aaPredicted RBP12.84□□□□□ -0.35
CHL1-209ENST00000461289 SMAPO00193 183 aa12.83□□□□□ -0.36
CHL1-209ENST00000461289 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
CHL1-209ENST00000461289 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
CHL1-209ENST00000461289 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
CHL1-209ENST00000461289 ATP1B4Q9UN42 357 aaPredicted RBP12.82□□□□□ -0.36
CHL1-209ENST00000461289 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
CHL1-209ENST00000461289 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
CHL1-209ENST00000461289 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
CHL1-209ENST00000461289 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
CHL1-209ENST00000461289 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
CHL1-209ENST00000461289 RABGEF1Q9UJ41 708 aa12.79□□□□□ -0.36
CHL1-209ENST00000461289 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms