RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 SOCS7O14512 581 aa29.08■■■□□ 2.25
COL9A2-205ENST00000461118 MAP3K1Q13233 1512 aa29.07■■■□□ 2.24
COL9A2-205ENST00000461118 NEURL4Q96JN8 1562 aa29.05■■■□□ 2.24
COL9A2-205ENST00000461118 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
COL9A2-205ENST00000461118 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
COL9A2-205ENST00000461118 KDM5DQ9BY66 1539 aa29.02■■■□□ 2.24
COL9A2-205ENST00000461118 FAM135AQ9P2D6 1515 aa29.02■■■□□ 2.24
COL9A2-205ENST00000461118 NCOA2Q15596 1464 aa29.02■■■□□ 2.24
COL9A2-205ENST00000461118 PZPP20742 1482 aa29.01■■■□□ 2.23
COL9A2-205ENST00000461118 LRRC9Q6ZRR7 1453 aa29.01■■■□□ 2.23
COL9A2-205ENST00000461118 FBXO31Q5XUX0 539 aaPredicted RBP28.99■■■□□ 2.23
COL9A2-205ENST00000461118 UBAP1LF5GYI3 381 aa28.98■■■□□ 2.23
COL9A2-205ENST00000461118 ARHGEF5Q12774 1597 aa28.97■■■□□ 2.23
COL9A2-205ENST00000461118 KIF3BO15066 747 aa28.96■■■□□ 2.23
COL9A2-205ENST00000461118 TNRQ92752 1358 aa28.96■■■□□ 2.23
COL9A2-205ENST00000461118 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
COL9A2-205ENST00000461118 RSPH4AQ5TD94 716 aa28.9■■■□□ 2.22
COL9A2-205ENST00000461118 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
COL9A2-205ENST00000461118 VWDEQ8N2E2 1590 aa28.89■■■□□ 2.22
COL9A2-205ENST00000461118 CPS1P31327 1500 aa28.89■■■□□ 2.21
COL9A2-205ENST00000461118 APLP2Q06481 763 aa28.88■■■□□ 2.21
COL9A2-205ENST00000461118 DEPDC5O75140 1603 aa28.87■■■□□ 2.21
COL9A2-205ENST00000461118 MIA2Q96PC5 1412 aa28.87■■■□□ 2.21
COL9A2-205ENST00000461118 SHANK2Q9UPX8 1470 aa28.87■■■□□ 2.21
COL9A2-205ENST00000461118 WASHC2CQ9Y4E1 1318 aa28.87■■■□□ 2.21
COL9A2-205ENST00000461118 NLRP1Q9C000 1473 aa28.86■■■□□ 2.21
COL9A2-205ENST00000461118 MAST1Q9Y2H9 1570 aa28.86■■■□□ 2.21
COL9A2-205ENST00000461118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.85■■■□□ 2.21
COL9A2-205ENST00000461118 UGGT1Q9NYU2 1555 aa28.84■■■□□ 2.21
COL9A2-205ENST00000461118 MED14O60244 1454 aa28.84■■■□□ 2.21
COL9A2-205ENST00000461118 ALKQ9UM73 1620 aa28.83■■■□□ 2.21
COL9A2-205ENST00000461118 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
COL9A2-205ENST00000461118 MROH1Q8NDA8 1641 aa28.82■■■□□ 2.2
COL9A2-205ENST00000461118 STRCP1A6NGW2 1772 aa28.82■■■□□ 2.2
COL9A2-205ENST00000461118 ABCC3O15438 1527 aa28.81■■■□□ 2.2
COL9A2-205ENST00000461118 IQGAP1P46940 1657 aa28.8■■■□□ 2.2
COL9A2-205ENST00000461118 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
COL9A2-205ENST00000461118 ANKLE2Q86XL3 938 aa28.78■■■□□ 2.2
COL9A2-205ENST00000461118 THEMISQ8N1K5 641 aaPredicted RBP28.77■■■□□ 2.2
COL9A2-205ENST00000461118 CEP152O94986 1710 aa28.77■■■□□ 2.2
COL9A2-205ENST00000461118 NPHP4O75161 1426 aaPredicted RBP28.77■■■□□ 2.2
COL9A2-205ENST00000461118 CFAP65Q6ZU64 1925 aaKnown RBP28.77■■■□□ 2.2
COL9A2-205ENST00000461118 TSPY4P0CV99 314 aa28.76■■■□□ 2.19
COL9A2-205ENST00000461118 TSPY10P0CW01 314 aa28.76■■■□□ 2.19
COL9A2-205ENST00000461118 HSPA1LP34931 641 aa28.76■■■□□ 2.19
COL9A2-205ENST00000461118 MYOM3Q5VTT5 1437 aa28.76■■■□□ 2.19
COL9A2-205ENST00000461118 MED1Q15648 1581 aaPredicted RBP28.75■■■□□ 2.19
COL9A2-205ENST00000461118 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
COL9A2-205ENST00000461118 ERVK-7P63135 1459 aa28.72■■■□□ 2.19
COL9A2-205ENST00000461118 TOM1O60784 492 aa28.71■■■□□ 2.19
COL9A2-205ENST00000461118 PIP4K2BP78356 416 aa28.71■■■□□ 2.19
COL9A2-205ENST00000461118 SCAF1Q9H7N4 1312 aaKnown RBP28.67■■■□□ 2.18
COL9A2-205ENST00000461118 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
COL9A2-205ENST00000461118 LRRC7Q96NW7 1537 aa28.64■■■□□ 2.18
COL9A2-205ENST00000461118 SYNMO15061 1565 aa28.64■■■□□ 2.18
COL9A2-205ENST00000461118 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
COL9A2-205ENST00000461118 XIRP1Q702N8 1843 aaKnown RBP28.61■■■□□ 2.17
COL9A2-205ENST00000461118 PRDM15P57071 1507 aaPredicted RBP28.6■■■□□ 2.17
COL9A2-205ENST00000461118 ARHGAP23Q9P227 1491 aa28.58■■■□□ 2.17
COL9A2-205ENST00000461118 SLIT1O75093 1534 aa28.57■■■□□ 2.16
COL9A2-205ENST00000461118 FGD6Q6ZV73 1430 aa28.56■■■□□ 2.16
COL9A2-205ENST00000461118 ARHGAP31Q2M1Z3 1444 aa28.55■■■□□ 2.16
COL9A2-205ENST00000461118 PTPN23Q9H3S7 1636 aa28.54■■■□□ 2.16
COL9A2-205ENST00000461118 SCAF11Q99590 1463 aaKnown RBP28.54■■■□□ 2.16
COL9A2-205ENST00000461118 PIK3C2BO00750 1634 aa28.52■■■□□ 2.16
COL9A2-205ENST00000461118 ABCC5O15440 1437 aa28.52■■■□□ 2.16
COL9A2-205ENST00000461118 LTKP29376 864 aa28.51■■■□□ 2.15
COL9A2-205ENST00000461118 ERBINQ96RT1 1412 aa28.51■■■□□ 2.15
COL9A2-205ENST00000461118 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
COL9A2-205ENST00000461118 KDM5AP29375 1690 aaKnown RBP28.47■■■□□ 2.15
COL9A2-205ENST00000461118 DAPK1P53355 1430 aa28.43■■■□□ 2.14
COL9A2-205ENST00000461118 TXNDC2Q86VQ3 553 aa28.42■■■□□ 2.14
COL9A2-205ENST00000461118 RRP7BPQ9NSQ0 103 aa28.42■■■□□ 2.14
COL9A2-205ENST00000461118 LMTK2Q8IWU2 1503 aa28.4■■■□□ 2.14
COL9A2-205ENST00000461118 TMEM2Q9UHN6 1383 aa28.38■■■□□ 2.13
COL9A2-205ENST00000461118 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
COL9A2-205ENST00000461118 TET3O43151 1660 aa28.37■■■□□ 2.13
COL9A2-205ENST00000461118 EFCAB6Q5THR3 1501 aa28.35■■■□□ 2.13
COL9A2-205ENST00000461118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.34■■■□□ 2.13
COL9A2-205ENST00000461118 PHF23Q9BUL5 403 aaPredicted RBP28.33■■■□□ 2.13
COL9A2-205ENST00000461118 FAM50AQ14320 339 aaKnown RBP28.32■■■□□ 2.12
COL9A2-205ENST00000461118 EID1Q9Y6B2 187 aa28.32■■■□□ 2.12
COL9A2-205ENST00000461118 IDI1Q13907 227 aa28.31■■■□□ 2.12
COL9A2-205ENST00000461118 NOS1P29475 1434 aa28.3■■■□□ 2.12
COL9A2-205ENST00000461118 KANK1Q14678 1352 aa28.29■■■□□ 2.12
COL9A2-205ENST00000461118 RGS17Q9UGC6 210 aaPredicted RBP28.29■■■□□ 2.12
COL9A2-205ENST00000461118 ANKRD30AQ9BXX3 1397 aa28.28■■■□□ 2.12
COL9A2-205ENST00000461118 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
COL9A2-205ENST00000461118 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
COL9A2-205ENST00000461118 CHIC2Q9UKJ5 165 aa28.27■■■□□ 2.12
COL9A2-205ENST00000461118 ADGRB3O60242 1522 aa28.27■■■□□ 2.12
COL9A2-205ENST00000461118 FAM135BQ49AJ0 1406 aa28.26■■■□□ 2.12
COL9A2-205ENST00000461118 NWD1Q149M9 1564 aa28.26■■■□□ 2.11
COL9A2-205ENST00000461118 ADGRL2O95490 1459 aa28.25■■■□□ 2.11
COL9A2-205ENST00000461118 ROBO1Q9Y6N7 1651 aa28.25■■■□□ 2.11
COL9A2-205ENST00000461118 TMEM94Q12767 1356 aa28.24■■■□□ 2.11
COL9A2-205ENST00000461118 KCNA6P17658 529 aa28.22■■■□□ 2.11
COL9A2-205ENST00000461118 STAG3Q9UJ98 1225 aa28.21■■■□□ 2.11
COL9A2-205ENST00000461118 SLC26A8Q96RN1 970 aa28.2■■■□□ 2.1
COL9A2-205ENST00000461118 CHD2O14647 1828 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms