RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
SF3A3-202ENST00000460925 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
SF3A3-202ENST00000460925 PTGDRQ13258 359 aa8.53□□□□□ -1.04
SF3A3-202ENST00000460925 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
SF3A3-202ENST00000460925 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
SF3A3-202ENST00000460925 PHF14O94880 888 aa8.51□□□□□ -1.05
SF3A3-202ENST00000460925 FECHP22830 423 aa8.51□□□□□ -1.05
SF3A3-202ENST00000460925 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
SF3A3-202ENST00000460925 ARXQ96QS3 562 aa8.51□□□□□ -1.05
SF3A3-202ENST00000460925 EPAS1Q99814 870 aa8.51□□□□□ -1.05
SF3A3-202ENST00000460925 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
SF3A3-202ENST00000460925 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
SF3A3-202ENST00000460925 FAM117AQ9C073 453 aa8.49□□□□□ -1.05
SF3A3-202ENST00000460925 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
SF3A3-202ENST00000460925 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
SF3A3-202ENST00000460925 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-202ENST00000460925 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
SF3A3-202ENST00000460925 NESP48681 1621 aa8.47□□□□□ -1.05
SF3A3-202ENST00000460925 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
SF3A3-202ENST00000460925 GOPCQ9HD26 462 aa8.46□□□□□ -1.06
SF3A3-202ENST00000460925 SLAIN1Q8ND83 568 aa8.44□□□□□ -1.06
SF3A3-202ENST00000460925 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.44□□□□□ -1.06
SF3A3-202ENST00000460925 PCDHGA4Q9Y5G9 962 aa8.44□□□□□ -1.06
SF3A3-202ENST00000460925 PCDHGA10Q9Y5H3 936 aa8.44□□□□□ -1.06
SF3A3-202ENST00000460925 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
SF3A3-202ENST00000460925 FBXW7Q969H0 707 aa8.43□□□□□ -1.06
SF3A3-202ENST00000460925 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
SF3A3-202ENST00000460925 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
SF3A3-202ENST00000460925 POTEHQ6S545 545 aa8.42□□□□□ -1.06
SF3A3-202ENST00000460925 JPH4Q96JJ6 628 aa8.42□□□□□ -1.06
SF3A3-202ENST00000460925 CDHR5Q9HBB8 845 aa8.42□□□□□ -1.06
SF3A3-202ENST00000460925 MAP3K7O43318 606 aa8.41□□□□□ -1.06
SF3A3-202ENST00000460925 TTLL12Q14166 644 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-202ENST00000460925 KIF21AQ7Z4S6 1674 aa8.4□□□□□ -1.06
SF3A3-202ENST00000460925 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
SF3A3-202ENST00000460925 CLCN1P35523 988 aa8.39□□□□□ -1.07
SF3A3-202ENST00000460925 MYT1Q01538 1121 aa8.39□□□□□ -1.07
SF3A3-202ENST00000460925 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
SF3A3-202ENST00000460925 MS4A1P11836 297 aa8.38□□□□□ -1.07
SF3A3-202ENST00000460925 FOSBP53539 338 aa8.38□□□□□ -1.07
SF3A3-202ENST00000460925 TSR1Q2NL82 804 aaKnown RBP8.38□□□□□ -1.07
SF3A3-202ENST00000460925 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
SF3A3-202ENST00000460925 LAMC3Q9Y6N6 1575 aa8.38□□□□□ -1.07
SF3A3-202ENST00000460925 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
SF3A3-202ENST00000460925 RBM27Q9P2N5 1060 aaKnown RBP8.37□□□□□ -1.07
SF3A3-202ENST00000460925 CFTRP13569 1480 aa8.37□□□□□ -1.07
SF3A3-202ENST00000460925 CADPSQ9ULU8 1353 aa8.36□□□□□ -1.07
SF3A3-202ENST00000460925 SP7Q8TDD2 431 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-202ENST00000460925 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
SF3A3-202ENST00000460925 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
SF3A3-202ENST00000460925 OATP04181 439 aa8.35□□□□□ -1.07
SF3A3-202ENST00000460925 TTC13Q8NBP0 860 aa8.35□□□□□ -1.07
SF3A3-202ENST00000460925 PHOX2BQ99453 314 aa8.35□□□□□ -1.07
SF3A3-202ENST00000460925 TTBK1Q5TCY1 1321 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-202ENST00000460925 FLIIQ13045 1269 aa8.34□□□□□ -1.07
SF3A3-202ENST00000460925 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
SF3A3-202ENST00000460925 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
SF3A3-202ENST00000460925 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
SF3A3-202ENST00000460925 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
SF3A3-202ENST00000460925 ABCC8Q09428 1581 aa8.34□□□□□ -1.07
SF3A3-202ENST00000460925 C6orf132Q5T0Z8 1188 aa8.33□□□□□ -1.08
SF3A3-202ENST00000460925 METTL3Q86U44 580 aaKnown RBP8.33□□□□□ -1.08
SF3A3-202ENST00000460925 RSPH6AQ9H0K4 717 aa8.33□□□□□ -1.08
SF3A3-202ENST00000460925 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-202ENST00000460925 MDM2Q00987 491 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-202ENST00000460925 DOK7Q18PE1 504 aa8.32□□□□□ -1.08
SF3A3-202ENST00000460925 FANCD2Q9BXW9 1451 aa8.32□□□□□ -1.08
SF3A3-202ENST00000460925 HOXB3P14651 431 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-202ENST00000460925 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-202ENST00000460925 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
SF3A3-202ENST00000460925 PCMTD1Q96MG8 357 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-202ENST00000460925 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
SF3A3-202ENST00000460925 ZNF454Q8N9F8 522 aa8.3□□□□□ -1.08
SF3A3-202ENST00000460925 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-202ENST00000460925 ERCC6Q03468 1493 aa8.3□□□□□ -1.08
SF3A3-202ENST00000460925 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
SF3A3-202ENST00000460925 GPR153Q6NV75 609 aa8.29□□□□□ -1.08
SF3A3-202ENST00000460925 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
SF3A3-202ENST00000460925 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
SF3A3-202ENST00000460925 THOC2Q8NI27 1593 aaKnown RBP8.28□□□□□ -1.08
SF3A3-202ENST00000460925 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
SF3A3-202ENST00000460925 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
SF3A3-202ENST00000460925 NUDT7P0C024 238 aa8.27□□□□□ -1.09
SF3A3-202ENST00000460925 POTEJP0CG39 1038 aa8.27□□□□□ -1.09
SF3A3-202ENST00000460925 PRSS12P56730 875 aa8.27□□□□□ -1.09
SF3A3-202ENST00000460925 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
SF3A3-202ENST00000460925 PDS5BQ9NTI5 1447 aa8.27□□□□□ -1.09
SF3A3-202ENST00000460925 SYNJ1O43426 1573 aa8.27□□□□□ -1.09
SF3A3-202ENST00000460925 URB2Q14146 1524 aaKnown RBP8.26□□□□□ -1.09
SF3A3-202ENST00000460925 FAM161AQ3B820 660 aa8.26□□□□□ -1.09
SF3A3-202ENST00000460925 BEGAINQ9BUH8 593 aa8.26□□□□□ -1.09
SF3A3-202ENST00000460925 CUX1P39880 1505 aa8.25□□□□□ -1.09
SF3A3-202ENST00000460925 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
SF3A3-202ENST00000460925 RBM46Q8TBY0 533 aaKnown RBP8.25□□□□□ -1.09
SF3A3-202ENST00000460925 KHSRPQ92945 711 aaKnown RBP eCLIP8.25□□□□□ -1.09
SF3A3-202ENST00000460925 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
SF3A3-202ENST00000460925 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.23□□□□□ -1.09
SF3A3-202ENST00000460925 BCL2L12Q9HB09 334 aa8.23□□□□□ -1.09
SF3A3-202ENST00000460925 MRC2Q9UBG0 1479 aa8.23□□□□□ -1.09
SF3A3-202ENST00000460925 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms