RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 LRRC9Q6ZRR7 1453 aa14.92□□□□□ -0.02
COL6A2-207ENST00000460886 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
COL6A2-207ENST00000460886 PZPP20742 1482 aa14.91□□□□□ -0.02
COL6A2-207ENST00000460886 PKD2Q13563 968 aa14.91□□□□□ -0.02
COL6A2-207ENST00000460886 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
COL6A2-207ENST00000460886 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
COL6A2-207ENST00000460886 NCKAP5LQ9HCH0 1330 aa14.88□□□□□ -0.03
COL6A2-207ENST00000460886 POLR1AO95602 1720 aaPredicted RBP14.87□□□□□ -0.03
COL6A2-207ENST00000460886 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
COL6A2-207ENST00000460886 KIF3BO15066 747 aa14.86□□□□□ -0.03
COL6A2-207ENST00000460886 ZC3H13Q5T200 1668 aaKnown RBP14.86□□□□□ -0.03
COL6A2-207ENST00000460886 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
COL6A2-207ENST00000460886 MIA2Q96PC5 1412 aa14.85□□□□□ -0.03
COL6A2-207ENST00000460886 TNRQ92752 1358 aa14.85□□□□□ -0.03
COL6A2-207ENST00000460886 ZNF335Q9H4Z2 1342 aaPredicted RBP14.84□□□□□ -0.03
COL6A2-207ENST00000460886 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
COL6A2-207ENST00000460886 TSPY4P0CV99 314 aa14.83□□□□□ -0.04
COL6A2-207ENST00000460886 TSPY10P0CW01 314 aa14.83□□□□□ -0.04
COL6A2-207ENST00000460886 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
COL6A2-207ENST00000460886 MROH1Q8NDA8 1641 aa14.82□□□□□ -0.04
COL6A2-207ENST00000460886 APLP2Q06481 763 aa14.82□□□□□ -0.04
COL6A2-207ENST00000460886 FBXO31Q5XUX0 539 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-207ENST00000460886 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
COL6A2-207ENST00000460886 ABCC3O15438 1527 aa14.82□□□□□ -0.04
COL6A2-207ENST00000460886 DEPDC5O75140 1603 aa14.81□□□□□ -0.04
COL6A2-207ENST00000460886 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
COL6A2-207ENST00000460886 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-207ENST00000460886 MED14O60244 1454 aa14.8□□□□□ -0.04
COL6A2-207ENST00000460886 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
COL6A2-207ENST00000460886 CROCC2H7BZ55 1655 aa14.78□□□□□ -0.04
COL6A2-207ENST00000460886 CPS1P31327 1500 aa14.78□□□□□ -0.04
COL6A2-207ENST00000460886 SHANK2Q9UPX8 1470 aa14.78□□□□□ -0.04
COL6A2-207ENST00000460886 DUOX2Q9NRD8 1548 aa14.77□□□□□ -0.04
COL6A2-207ENST00000460886 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.05
COL6A2-207ENST00000460886 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-207ENST00000460886 ERVK-7P63135 1459 aa14.76□□□□□ -0.05
COL6A2-207ENST00000460886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL6A2-207ENST00000460886 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
COL6A2-207ENST00000460886 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-207ENST00000460886 CEP152O94986 1710 aa14.75□□□□□ -0.05
COL6A2-207ENST00000460886 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
COL6A2-207ENST00000460886 ANKLE2Q86XL3 938 aa14.73□□□□□ -0.05
COL6A2-207ENST00000460886 ARHGAP31Q2M1Z3 1444 aa14.73□□□□□ -0.05
COL6A2-207ENST00000460886 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
COL6A2-207ENST00000460886 PTPN23Q9H3S7 1636 aa14.73□□□□□ -0.05
COL6A2-207ENST00000460886 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
COL6A2-207ENST00000460886 UBAP1LF5GYI3 381 aa14.72□□□□□ -0.05
COL6A2-207ENST00000460886 ABCC5O15440 1437 aa14.72□□□□□ -0.05
COL6A2-207ENST00000460886 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-207ENST00000460886 ILDR2Q71H61 639 aa14.71□□□□□ -0.05
COL6A2-207ENST00000460886 KIF15Q9NS87 1388 aa14.7□□□□□ -0.06
COL6A2-207ENST00000460886 DAPK1P53355 1430 aa14.69□□□□□ -0.06
COL6A2-207ENST00000460886 ALKQ9UM73 1620 aa14.69□□□□□ -0.06
COL6A2-207ENST00000460886 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
COL6A2-207ENST00000460886 STRCP1A6NGW2 1772 aa14.68□□□□□ -0.06
COL6A2-207ENST00000460886 SLIT1O75093 1534 aa14.68□□□□□ -0.06
COL6A2-207ENST00000460886 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
COL6A2-207ENST00000460886 SYNMO15061 1565 aa14.68□□□□□ -0.06
COL6A2-207ENST00000460886 KDM5AP29375 1690 aaKnown RBP14.67□□□□□ -0.06
COL6A2-207ENST00000460886 LMTK2Q8IWU2 1503 aa14.66□□□□□ -0.06
COL6A2-207ENST00000460886 CFAP65Q6ZU64 1925 aaKnown RBP14.66□□□□□ -0.06
COL6A2-207ENST00000460886 SOCS7O14512 581 aa14.65□□□□□ -0.06
COL6A2-207ENST00000460886 SCAF11Q99590 1463 aaKnown RBP14.64□□□□□ -0.07
COL6A2-207ENST00000460886 TOM1O60784 492 aa14.64□□□□□ -0.07
COL6A2-207ENST00000460886 PPARGC1BQ86YN6 1023 aaKnown RBP14.64□□□□□ -0.07
COL6A2-207ENST00000460886 LRRC7Q96NW7 1537 aa14.63□□□□□ -0.07
COL6A2-207ENST00000460886 ADGRL2O95490 1459 aa14.63□□□□□ -0.07
COL6A2-207ENST00000460886 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
COL6A2-207ENST00000460886 RRP7BPQ9NSQ0 103 aa14.62□□□□□ -0.07
COL6A2-207ENST00000460886 ANKRD30AQ9BXX3 1397 aa14.61□□□□□ -0.07
COL6A2-207ENST00000460886 EFCAB6Q5THR3 1501 aa14.6□□□□□ -0.07
COL6A2-207ENST00000460886 KANK1Q14678 1352 aa14.6□□□□□ -0.07
COL6A2-207ENST00000460886 LTKP29376 864 aa14.59□□□□□ -0.07
COL6A2-207ENST00000460886 HSPA1LP34931 641 aa14.59□□□□□ -0.07
COL6A2-207ENST00000460886 NOS1P29475 1434 aa14.58□□□□□ -0.07
COL6A2-207ENST00000460886 XIRP1Q702N8 1843 aaKnown RBP14.58□□□□□ -0.08
COL6A2-207ENST00000460886 MED1Q15648 1581 aaPredicted RBP14.58□□□□□ -0.08
COL6A2-207ENST00000460886 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.08
COL6A2-207ENST00000460886 PIP4K2BP78356 416 aa14.56□□□□□ -0.08
COL6A2-207ENST00000460886 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
COL6A2-207ENST00000460886 TET3O43151 1660 aa14.55□□□□□ -0.08
COL6A2-207ENST00000460886 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
COL6A2-207ENST00000460886 ADGRB3O60242 1522 aa14.55□□□□□ -0.08
COL6A2-207ENST00000460886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL6A2-207ENST00000460886 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
COL6A2-207ENST00000460886 IDI1Q13907 227 aa14.53□□□□□ -0.08
COL6A2-207ENST00000460886 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
COL6A2-207ENST00000460886 EID1Q9Y6B2 187 aa14.53□□□□□ -0.08
COL6A2-207ENST00000460886 ANKRD50Q9ULJ7 1429 aa14.52□□□□□ -0.08
COL6A2-207ENST00000460886 UNC13BO14795 1591 aa14.51□□□□□ -0.09
COL6A2-207ENST00000460886 NWD1Q149M9 1564 aa14.51□□□□□ -0.09
COL6A2-207ENST00000460886 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
COL6A2-207ENST00000460886 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
COL6A2-207ENST00000460886 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
COL6A2-207ENST00000460886 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
COL6A2-207ENST00000460886 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
COL6A2-207ENST00000460886 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
COL6A2-207ENST00000460886 MYO5BQ9ULV0 1848 aa14.47□□□□□ -0.09
COL6A2-207ENST00000460886 TMEM131LA2VDJ0 1609 aa14.47□□□□□ -0.09
COL6A2-207ENST00000460886 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms