RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
CPNE6-202ENST00000460657 POGKQ9P215 609 aa15.54■□□□□ 0.08
CPNE6-202ENST00000460657 GGT6Q6P531 493 aa15.53■□□□□ 0.08
CPNE6-202ENST00000460657 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
CPNE6-202ENST00000460657 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
CPNE6-202ENST00000460657 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
CPNE6-202ENST00000460657 UGGT2Q9NYU1 1516 aa15.52■□□□□ 0.08
CPNE6-202ENST00000460657 PDE4AP27815 886 aa15.52■□□□□ 0.08
CPNE6-202ENST00000460657 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.08
CPNE6-202ENST00000460657 RPRD2Q5VT52 1461 aaKnown RBP15.52■□□□□ 0.07
CPNE6-202ENST00000460657 PLIN1O60240 522 aa15.51■□□□□ 0.07
CPNE6-202ENST00000460657 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
CPNE6-202ENST00000460657 ANP32BQ92688 251 aaKnown RBP15.51■□□□□ 0.07
CPNE6-202ENST00000460657 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
CPNE6-202ENST00000460657 SMG6Q86US8 1419 aaKnown RBP15.5■□□□□ 0.07
CPNE6-202ENST00000460657 EIF5BO60841 1220 aaKnown RBP15.5■□□□□ 0.07
CPNE6-202ENST00000460657 ARXQ96QS3 562 aa15.49■□□□□ 0.07
CPNE6-202ENST00000460657 CRBNQ96SW2 442 aa15.49■□□□□ 0.07
CPNE6-202ENST00000460657 PNNQ9H307 717 aaKnown RBP15.49■□□□□ 0.07
CPNE6-202ENST00000460657 STAC3Q96MF2 364 aa15.49■□□□□ 0.07
CPNE6-202ENST00000460657 CAMSAP2Q08AD1 1489 aa15.49■□□□□ 0.07
CPNE6-202ENST00000460657 SRPK2P78362 688 aaKnown RBP15.48■□□□□ 0.07
CPNE6-202ENST00000460657 CENPQQ7L2Z9 268 aaPredicted RBP15.47■□□□□ 0.07
CPNE6-202ENST00000460657 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
CPNE6-202ENST00000460657 WASHC2CQ9Y4E1 1318 aa15.47■□□□□ 0.07
CPNE6-202ENST00000460657 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.07
CPNE6-202ENST00000460657 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.07
CPNE6-202ENST00000460657 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.06
CPNE6-202ENST00000460657 CENPJQ9HC77 1338 aaPredicted RBP15.45■□□□□ 0.06
CPNE6-202ENST00000460657 NBPF1Q3BBV0 1214 aa15.45■□□□□ 0.06
CPNE6-202ENST00000460657 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
CPNE6-202ENST00000460657 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
CPNE6-202ENST00000460657 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
CPNE6-202ENST00000460657 TCOF1Q13428 1488 aaKnown RBP15.44■□□□□ 0.06
CPNE6-202ENST00000460657 E9PSI1 815 aa15.43■□□□□ 0.06
CPNE6-202ENST00000460657 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
CPNE6-202ENST00000460657 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
CPNE6-202ENST00000460657 RWDD1Q9H446 243 aaPredicted RBP15.42■□□□□ 0.06
CPNE6-202ENST00000460657 NGEFQ8N5V2 710 aa15.42■□□□□ 0.06
CPNE6-202ENST00000460657 APAF1O14727 1248 aa15.41■□□□□ 0.06
CPNE6-202ENST00000460657 STK26Q9P289 416 aa15.41■□□□□ 0.06
CPNE6-202ENST00000460657 TRAK1Q9UPV9 953 aa15.41■□□□□ 0.06
CPNE6-202ENST00000460657 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
CPNE6-202ENST00000460657 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
CPNE6-202ENST00000460657 CDCA7LQ96GN5 454 aa15.4■□□□□ 0.06
CPNE6-202ENST00000460657 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
CPNE6-202ENST00000460657 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
CPNE6-202ENST00000460657 ADAMTS8Q9UP79 889 aa15.39■□□□□ 0.05
CPNE6-202ENST00000460657 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
CPNE6-202ENST00000460657 IPO8O15397 1037 aaKnown RBP15.38■□□□□ 0.05
CPNE6-202ENST00000460657 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
CPNE6-202ENST00000460657 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
CPNE6-202ENST00000460657 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
CPNE6-202ENST00000460657 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
CPNE6-202ENST00000460657 GOLGA6L22H0YM25 854 aa15.37■□□□□ 0.05
CPNE6-202ENST00000460657 CCDC141Q6ZP82 1450 aa15.36■□□□□ 0.05
CPNE6-202ENST00000460657 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
CPNE6-202ENST00000460657 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
CPNE6-202ENST00000460657 GPATCH8Q9UKJ3 1502 aaKnown RBP15.35■□□□□ 0.05
CPNE6-202ENST00000460657 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
CPNE6-202ENST00000460657 RRP7AQ9Y3A4 280 aaKnown RBP15.35■□□□□ 0.05
CPNE6-202ENST00000460657 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
CPNE6-202ENST00000460657 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
CPNE6-202ENST00000460657 HSCBQ8IWL3 235 aa15.34■□□□□ 0.05
CPNE6-202ENST00000460657 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
CPNE6-202ENST00000460657 KIF14Q15058 1648 aa15.34■□□□□ 0.05
CPNE6-202ENST00000460657 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.05
CPNE6-202ENST00000460657 AFAP1Q8N556 730 aa15.33■□□□□ 0.05
CPNE6-202ENST00000460657 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.04
CPNE6-202ENST00000460657 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
CPNE6-202ENST00000460657 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
CPNE6-202ENST00000460657 WDR62O43379 1518 aa15.32■□□□□ 0.04
CPNE6-202ENST00000460657 NUTM2DQ5VT03 806 aaPredicted RBP15.32■□□□□ 0.04
CPNE6-202ENST00000460657 HSP90AB1P08238 724 aaKnown RBP15.31■□□□□ 0.04
CPNE6-202ENST00000460657 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
CPNE6-202ENST00000460657 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
CPNE6-202ENST00000460657 EVC2Q86UK5 1308 aa15.31■□□□□ 0.04
CPNE6-202ENST00000460657 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
CPNE6-202ENST00000460657 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
CPNE6-202ENST00000460657 SAMD9Q5K651 1589 aa15.31■□□□□ 0.04
CPNE6-202ENST00000460657 MSH5O43196 834 aa15.3■□□□□ 0.04
CPNE6-202ENST00000460657 TRIM44Q96DX7 344 aaPredicted RBP15.3■□□□□ 0.04
CPNE6-202ENST00000460657 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
CPNE6-202ENST00000460657 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
CPNE6-202ENST00000460657 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
CPNE6-202ENST00000460657 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
CPNE6-202ENST00000460657 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
CPNE6-202ENST00000460657 SPRYD3Q8NCJ5 442 aa15.27■□□□□ 0.04
CPNE6-202ENST00000460657 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
CPNE6-202ENST00000460657 BCL2L13Q9BXK5 485 aa15.27■□□□□ 0.04
CPNE6-202ENST00000460657 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.04
CPNE6-202ENST00000460657 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.03
CPNE6-202ENST00000460657 HDGFP51858 240 aaKnown RBP15.27■□□□□ 0.03
CPNE6-202ENST00000460657 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
CPNE6-202ENST00000460657 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
CPNE6-202ENST00000460657 RALGAPBQ86X10 1494 aa15.26■□□□□ 0.03
CPNE6-202ENST00000460657 BACH2Q9BYV9 841 aa15.25■□□□□ 0.03
CPNE6-202ENST00000460657 KIAA0556O60303 1618 aa15.25■□□□□ 0.03
CPNE6-202ENST00000460657 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
CPNE6-202ENST00000460657 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms