RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 PPP4R3BQ5MIZ7 849 aa8.84□□□□□ -0.99
ATRX-204ENST00000460639 FBXW7Q969H0 707 aa8.84□□□□□ -0.99
ATRX-204ENST00000460639 ERBB3P21860 1342 aa8.83□□□□□ -1
ATRX-204ENST00000460639 VARS2Q5ST30 1063 aaKnown RBP8.83□□□□□ -1
ATRX-204ENST00000460639 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
ATRX-204ENST00000460639 ZMYND10O75800 440 aa8.82□□□□□ -1
ATRX-204ENST00000460639 FECHP22830 423 aa8.82□□□□□ -1
ATRX-204ENST00000460639 C6orf132Q5T0Z8 1188 aa8.82□□□□□ -1
ATRX-204ENST00000460639 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
ATRX-204ENST00000460639 FAM205CA6NFA0 338 aa8.81□□□□□ -1
ATRX-204ENST00000460639 PTGDRQ13258 359 aa8.81□□□□□ -1
ATRX-204ENST00000460639 FCHSD2O94868 740 aa8.8□□□□□ -1
ATRX-204ENST00000460639 BARGINQ6ZT62 677 aa8.8□□□□□ -1
ATRX-204ENST00000460639 KRI1Q8N9T8 703 aaKnown RBP8.8□□□□□ -1
ATRX-204ENST00000460639 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
ATRX-204ENST00000460639 POTEB3A0JP26 581 aa8.78□□□□□ -1
ATRX-204ENST00000460639 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
ATRX-204ENST00000460639 GNPATO15228 680 aa8.78□□□□□ -1
ATRX-204ENST00000460639 COL9A1P20849 921 aa8.78□□□□□ -1
ATRX-204ENST00000460639 POTEBQ6S5H4 581 aa8.78□□□□□ -1
ATRX-204ENST00000460639 KCNK17Q96T54 332 aa8.78□□□□□ -1
ATRX-204ENST00000460639 HIC1Q14526 733 aa8.77□□□□□ -1.01
ATRX-204ENST00000460639 BCL2L12Q9HB09 334 aa8.77□□□□□ -1.01
ATRX-204ENST00000460639 AXIN2Q9Y2T1 843 aa8.77□□□□□ -1.01
ATRX-204ENST00000460639 PTPREP23469 700 aa8.75□□□□□ -1.01
ATRX-204ENST00000460639 PSEN2P49810 448 aa8.75□□□□□ -1.01
ATRX-204ENST00000460639 FAM161AQ3B820 660 aa8.75□□□□□ -1.01
ATRX-204ENST00000460639 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
ATRX-204ENST00000460639 HS3ST6Q96QI5 342 aa8.75□□□□□ -1.01
ATRX-204ENST00000460639 POTEEQ6S8J3 1075 aa8.74□□□□□ -1.01
ATRX-204ENST00000460639 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
ATRX-204ENST00000460639 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
ATRX-204ENST00000460639 MAP2K5Q13163 448 aa8.72□□□□□ -1.01
ATRX-204ENST00000460639 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
ATRX-204ENST00000460639 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
ATRX-204ENST00000460639 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
ATRX-204ENST00000460639 PROX2Q3B8N5 592 aa8.71□□□□□ -1.02
ATRX-204ENST00000460639 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
ATRX-204ENST00000460639 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
ATRX-204ENST00000460639 PRSS12P56730 875 aa8.7□□□□□ -1.02
ATRX-204ENST00000460639 AK7Q96M32 723 aa8.7□□□□□ -1.02
ATRX-204ENST00000460639 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
ATRX-204ENST00000460639 IRF6O14896 467 aa8.69□□□□□ -1.02
ATRX-204ENST00000460639 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
ATRX-204ENST00000460639 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
ATRX-204ENST00000460639 C3orf80F5H4A9 247 aa8.68□□□□□ -1.02
ATRX-204ENST00000460639 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
ATRX-204ENST00000460639 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
ATRX-204ENST00000460639 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
ATRX-204ENST00000460639 KCNH8Q96L42 1107 aa8.68□□□□□ -1.02
ATRX-204ENST00000460639 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
ATRX-204ENST00000460639 TRIM66O15016 1216 aa8.67□□□□□ -1.02
ATRX-204ENST00000460639 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
ATRX-204ENST00000460639 ZBED2Q9BTP6 218 aa8.66□□□□□ -1.02
ATRX-204ENST00000460639 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
ATRX-204ENST00000460639 SMAPO00193 183 aa8.65□□□□□ -1.02
ATRX-204ENST00000460639 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
ATRX-204ENST00000460639 TTC13Q8NBP0 860 aa8.65□□□□□ -1.02
ATRX-204ENST00000460639 GPBP1L1Q9HC44 474 aaPredicted RBP8.65□□□□□ -1.02
ATRX-204ENST00000460639 ADGRG1Q9Y653 693 aa8.65□□□□□ -1.02
ATRX-204ENST00000460639 PHOX2BQ99453 314 aa8.64□□□□□ -1.03
ATRX-204ENST00000460639 PDE4DQ08499 809 aa8.63□□□□□ -1.03
ATRX-204ENST00000460639 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
ATRX-204ENST00000460639 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
ATRX-204ENST00000460639 PNMA3Q9UL41 463 aa8.63□□□□□ -1.03
ATRX-204ENST00000460639 PBX2P40425 430 aa8.62□□□□□ -1.03
ATRX-204ENST00000460639 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
ATRX-204ENST00000460639 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
ATRX-204ENST00000460639 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
ATRX-204ENST00000460639 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
ATRX-204ENST00000460639 TTLL12Q14166 644 aaPredicted RBP8.6□□□□□ -1.03
ATRX-204ENST00000460639 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
ATRX-204ENST00000460639 PACS2Q86VP3 889 aa8.6□□□□□ -1.03
ATRX-204ENST00000460639 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
ATRX-204ENST00000460639 TATDN2Q93075 761 aa8.6□□□□□ -1.03
ATRX-204ENST00000460639 VPS9D1Q9Y2B5 631 aa8.6□□□□□ -1.03
ATRX-204ENST00000460639 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
ATRX-204ENST00000460639 LSM11P83369 360 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATRX-204ENST00000460639 RBM46Q8TBY0 533 aaKnown RBP8.59□□□□□ -1.03
ATRX-204ENST00000460639 OATP04181 439 aa8.58□□□□□ -1.04
ATRX-204ENST00000460639 ERICH6Q7L0X2 663 aa8.58□□□□□ -1.04
ATRX-204ENST00000460639 PARP9Q8IXQ6 854 aa8.58□□□□□ -1.04
ATRX-204ENST00000460639 EYA1Q99502 592 aa8.58□□□□□ -1.04
ATRX-204ENST00000460639 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
ATRX-204ENST00000460639 AMHR2Q16671 573 aa8.57□□□□□ -1.04
ATRX-204ENST00000460639 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
ATRX-204ENST00000460639 RCCD1A6NED2 376 aa8.56□□□□□ -1.04
ATRX-204ENST00000460639 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
ATRX-204ENST00000460639 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
ATRX-204ENST00000460639 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
ATRX-204ENST00000460639 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
ATRX-204ENST00000460639 SLC4A5Q9BY07 1137 aa8.55□□□□□ -1.04
ATRX-204ENST00000460639 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
ATRX-204ENST00000460639 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
ATRX-204ENST00000460639 CDAN1Q8IWY9 1227 aa8.53□□□□□ -1.04
ATRX-204ENST00000460639 TK2O00142 265 aa8.52□□□□□ -1.05
ATRX-204ENST00000460639 DNAJB2P25686 324 aa8.52□□□□□ -1.05
ATRX-204ENST00000460639 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
ATRX-204ENST00000460639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
ATRX-204ENST00000460639 MS4A1P11836 297 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms