RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 H3BQV1 296 aa19.96■□□□□ 0.79
HDAC7-217ENST00000459625 IFFO2Q5TF58 517 aa19.96■□□□□ 0.79
HDAC7-217ENST00000459625 CFAP44Q96MT7 982 aa19.96■□□□□ 0.79
HDAC7-217ENST00000459625 VPS37DQ86XT2 251 aa19.96■□□□□ 0.79
HDAC7-217ENST00000459625 KTN1Q86UP2 1357 aaKnown RBP19.96■□□□□ 0.79
HDAC7-217ENST00000459625 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
HDAC7-217ENST00000459625 EIF2S2P20042 333 aaKnown RBP19.95■□□□□ 0.78
HDAC7-217ENST00000459625 RRP7AQ9Y3A4 280 aaKnown RBP19.95■□□□□ 0.78
HDAC7-217ENST00000459625 PCMTD1Q96MG8 357 aaPredicted RBP19.95■□□□□ 0.78
HDAC7-217ENST00000459625 CEP162Q5TB80 1403 aa19.94■□□□□ 0.78
HDAC7-217ENST00000459625 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
HDAC7-217ENST00000459625 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
HDAC7-217ENST00000459625 APPP05067 770 aa19.93■□□□□ 0.78
HDAC7-217ENST00000459625 MTMR7Q9Y216 660 aa19.93■□□□□ 0.78
HDAC7-217ENST00000459625 MCTP1Q6DN14 999 aa19.93■□□□□ 0.78
HDAC7-217ENST00000459625 KIF16BQ96L93 1317 aa19.93■□□□□ 0.78
HDAC7-217ENST00000459625 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
HDAC7-217ENST00000459625 FYB1O15117 783 aa19.92■□□□□ 0.78
HDAC7-217ENST00000459625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■■■■ 56.5
HDAC7-217ENST00000459625 HMMRO75330 724 aa19.92■□□□□ 0.78
HDAC7-217ENST00000459625 AMOTL1Q8IY63 956 aa19.92■□□□□ 0.78
HDAC7-217ENST00000459625 SLC4A3P48751 1232 aa19.9■□□□□ 0.78
HDAC7-217ENST00000459625 TRAK1Q9UPV9 953 aa19.9■□□□□ 0.78
HDAC7-217ENST00000459625 WASHC2CQ9Y4E1 1318 aa19.9■□□□□ 0.78
HDAC7-217ENST00000459625 FOSBP53539 338 aa19.9■□□□□ 0.78
HDAC7-217ENST00000459625 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
HDAC7-217ENST00000459625 KDM4AO75164 1064 aa19.89■□□□□ 0.77
HDAC7-217ENST00000459625 CCDC43Q96MW1 224 aaKnown RBP19.88■□□□□ 0.77
HDAC7-217ENST00000459625 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
HDAC7-217ENST00000459625 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
HDAC7-217ENST00000459625 TSR1Q2NL82 804 aaKnown RBP19.88■□□□□ 0.77
HDAC7-217ENST00000459625 TTC5Q8N0Z6 440 aa19.88■□□□□ 0.77
HDAC7-217ENST00000459625 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
HDAC7-217ENST00000459625 RCAN3Q9UKA8 241 aa19.86■□□□□ 0.77
HDAC7-217ENST00000459625 DEKP35659 375 aaKnown RBP19.86■□□□□ 0.77
HDAC7-217ENST00000459625 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.772e-6■■■□□ 16.7
HDAC7-217ENST00000459625 TPM2P07951 284 aa19.85■□□□□ 0.77
HDAC7-217ENST00000459625 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
HDAC7-217ENST00000459625 BCL2L13Q9BXK5 485 aa19.84■□□□□ 0.77
HDAC7-217ENST00000459625 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
HDAC7-217ENST00000459625 FAM177BA6PVY3 158 aa19.83■□□□□ 0.76
HDAC7-217ENST00000459625 CSPP1Q1MSJ5 1256 aa19.83■□□□□ 0.76
HDAC7-217ENST00000459625 HDAC5Q9UQL6 1122 aa19.83■□□□□ 0.76
HDAC7-217ENST00000459625 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
HDAC7-217ENST00000459625 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
HDAC7-217ENST00000459625 TEFQ10587 303 aa19.8■□□□□ 0.76
HDAC7-217ENST00000459625 PAF1Q8N7H5 531 aa19.8■□□□□ 0.76
HDAC7-217ENST00000459625 CHMP4AQ9BY43 222 aa19.8■□□□□ 0.76
HDAC7-217ENST00000459625 TCERG1O14776 1098 aaKnown RBP19.79■□□□□ 0.76
HDAC7-217ENST00000459625 BCL11BQ9C0K0 894 aaPredicted RBP19.79■□□□□ 0.76
HDAC7-217ENST00000459625 NUP155O75694 1391 aa19.79■□□□□ 0.76
HDAC7-217ENST00000459625 PLIN1O60240 522 aa19.78■□□□□ 0.76
HDAC7-217ENST00000459625 CCDC27Q2M243 656 aa19.78■□□□□ 0.76
HDAC7-217ENST00000459625 NFXL1Q6ZNB6 911 aa19.78■□□□□ 0.76
HDAC7-217ENST00000459625 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
HDAC7-217ENST00000459625 TMEM132AQ24JP5 1023 aa19.78■□□□□ 0.76
HDAC7-217ENST00000459625 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
HDAC7-217ENST00000459625 CCAR1Q8IX12 1150 aaKnown RBP19.77■□□□□ 0.76
HDAC7-217ENST00000459625 USP35Q9P2H5 1018 aa19.77■□□□□ 0.76
HDAC7-217ENST00000459625 PSME1Q06323 249 aa19.77■□□□□ 0.76
HDAC7-217ENST00000459625 IKQ13123 557 aaPredicted RBP19.77■□□□□ 0.76
HDAC7-217ENST00000459625 TRIM29Q14134 588 aa19.77■□□□□ 0.75
HDAC7-217ENST00000459625 ANKRD45Q5TZF3 282 aa19.77■□□□□ 0.75
HDAC7-217ENST00000459625 ZNF592Q92610 1267 aa19.76■□□□□ 0.75
HDAC7-217ENST00000459625 ZFYVE27Q5T4F4 411 aa19.76■□□□□ 0.75
HDAC7-217ENST00000459625 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
HDAC7-217ENST00000459625 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
HDAC7-217ENST00000459625 PTMSP20962 102 aa19.75■□□□□ 0.75
HDAC7-217ENST00000459625 IBSPP21815 317 aaPredicted RBP19.75■□□□□ 0.75
HDAC7-217ENST00000459625 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
HDAC7-217ENST00000459625 GOLGA6L3A6NEY3 463 aa19.74■□□□□ 0.75
HDAC7-217ENST00000459625 ST18O60284 1047 aa19.74■□□□□ 0.75
HDAC7-217ENST00000459625 KIF3AQ9Y496 699 aa19.74■□□□□ 0.75
HDAC7-217ENST00000459625 LMOD3Q0VAK6 560 aa19.74■□□□□ 0.75
HDAC7-217ENST00000459625 GOLGA6L19H0YKK7 550 aa19.74■□□□□ 0.75
HDAC7-217ENST00000459625 NEXNQ0ZGT2 675 aa19.74■□□□□ 0.75
HDAC7-217ENST00000459625 COG3Q96JB2 828 aa19.73■□□□□ 0.75
HDAC7-217ENST00000459625 CENPJQ9HC77 1338 aaPredicted RBP19.73■□□□□ 0.75
HDAC7-217ENST00000459625 NAP1L1P55209 391 aaKnown RBP19.73■□□□□ 0.75
HDAC7-217ENST00000459625 R3HCC1Q9Y3T6 440 aaKnown RBP19.73■□□□□ 0.75
HDAC7-217ENST00000459625 CT47A1Q5JQC4 288 aaPredicted RBP19.73■□□□□ 0.75
HDAC7-217ENST00000459625 ANO2Q9NQ90 1003 aa19.72■□□□□ 0.75
HDAC7-217ENST00000459625 EIF3AQ14152 1382 aaKnown RBP19.72■□□□□ 0.75
HDAC7-217ENST00000459625 BECN2A8MW95 431 aa19.72■□□□□ 0.75
HDAC7-217ENST00000459625 TPM1P09493 284 aa19.72■□□□□ 0.75
HDAC7-217ENST00000459625 MINK1Q8N4C8 1332 aaPredicted RBP19.72■□□□□ 0.75
HDAC7-217ENST00000459625 DIAPH3Q9NSV4 1193 aa19.72■□□□□ 0.75
HDAC7-217ENST00000459625 ODF2Q5BJF6 829 aa19.71■□□□□ 0.75
HDAC7-217ENST00000459625 AIMP1Q12904 312 aaKnown RBP19.71■□□□□ 0.75
HDAC7-217ENST00000459625 EEA1Q15075 1411 aa19.71■□□□□ 0.75
HDAC7-217ENST00000459625 ZNF428Q96B54 188 aa19.71■□□□□ 0.75
HDAC7-217ENST00000459625 CPLX1O14810 134 aa19.69■□□□□ 0.74
HDAC7-217ENST00000459625 VSIG10Q8N0Z9 540 aa19.68■□□□□ 0.74
HDAC7-217ENST00000459625 ERICH2A1L162 156 aa19.67■□□□□ 0.74
HDAC7-217ENST00000459625 CUX2O14529 1486 aa19.67■□□□□ 0.74
HDAC7-217ENST00000459625 IFIT2P09913 472 aaKnown RBP19.67■□□□□ 0.74
HDAC7-217ENST00000459625 CCDC47Q96A33 483 aaKnown RBP19.67■□□□□ 0.74
HDAC7-217ENST00000459625 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
HDAC7-217ENST00000459625 NUTM2BA6NNL0 878 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-217ENST00000459625 NUTM2EB1AL46 878 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms