RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
ITGA6-207ENST00000458358 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
ITGA6-207ENST00000458358 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.28
ITGA6-207ENST00000458358 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.28
ITGA6-207ENST00000458358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.29
ITGA6-207ENST00000458358 TTC37Q6PGP7 1564 aa13.27□□□□□ -0.29
ITGA6-207ENST00000458358 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
ITGA6-207ENST00000458358 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
ITGA6-207ENST00000458358 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
ITGA6-207ENST00000458358 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
ITGA6-207ENST00000458358 ROCK1Q13464 1354 aa13.25□□□□□ -0.29
ITGA6-207ENST00000458358 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
ITGA6-207ENST00000458358 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
ITGA6-207ENST00000458358 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
ITGA6-207ENST00000458358 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
ITGA6-207ENST00000458358 NEFMP07197 916 aa13.23□□□□□ -0.29
ITGA6-207ENST00000458358 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
ITGA6-207ENST00000458358 MLECQ14165 292 aa13.23□□□□□ -0.29
ITGA6-207ENST00000458358 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
ITGA6-207ENST00000458358 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
ITGA6-207ENST00000458358 PLCH2O75038 1416 aa13.22□□□□□ -0.29
ITGA6-207ENST00000458358 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
ITGA6-207ENST00000458358 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
ITGA6-207ENST00000458358 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
ITGA6-207ENST00000458358 MBD5Q9P267 1494 aa13.22□□□□□ -0.29
ITGA6-207ENST00000458358 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
ITGA6-207ENST00000458358 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
ITGA6-207ENST00000458358 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
ITGA6-207ENST00000458358 ARHGEF12Q9NZN5 1544 aa13.2□□□□□ -0.3
ITGA6-207ENST00000458358 ADCY10Q96PN6 1610 aa13.2□□□□□ -0.3
ITGA6-207ENST00000458358 FANCAO15360 1455 aa13.2□□□□□ -0.3
ITGA6-207ENST00000458358 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
ITGA6-207ENST00000458358 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
ITGA6-207ENST00000458358 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
ITGA6-207ENST00000458358 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
ITGA6-207ENST00000458358 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
ITGA6-207ENST00000458358 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
ITGA6-207ENST00000458358 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
ITGA6-207ENST00000458358 PDE4AP27815 886 aa13.17□□□□□ -0.3
ITGA6-207ENST00000458358 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
ITGA6-207ENST00000458358 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
ITGA6-207ENST00000458358 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
ITGA6-207ENST00000458358 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-207ENST00000458358 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
ITGA6-207ENST00000458358 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
ITGA6-207ENST00000458358 PZPP20742 1482 aa13.15□□□□□ -0.3
ITGA6-207ENST00000458358 USP47Q96K76 1375 aa13.15□□□□□ -0.3
ITGA6-207ENST00000458358 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
ITGA6-207ENST00000458358 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
ITGA6-207ENST00000458358 CDC42BPBQ9Y5S2 1711 aa13.15□□□□□ -0.3
ITGA6-207ENST00000458358 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
ITGA6-207ENST00000458358 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
ITGA6-207ENST00000458358 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
ITGA6-207ENST00000458358 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
ITGA6-207ENST00000458358 POLR1AO95602 1720 aaPredicted RBP13.12□□□□□ -0.31
ITGA6-207ENST00000458358 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
ITGA6-207ENST00000458358 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
ITGA6-207ENST00000458358 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
ITGA6-207ENST00000458358 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
ITGA6-207ENST00000458358 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
ITGA6-207ENST00000458358 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
ITGA6-207ENST00000458358 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
ITGA6-207ENST00000458358 ADGRL2O95490 1459 aa13.09□□□□□ -0.31
ITGA6-207ENST00000458358 BCORL1Q5H9F3 1711 aa13.09□□□□□ -0.31
ITGA6-207ENST00000458358 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
ITGA6-207ENST00000458358 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
ITGA6-207ENST00000458358 PLIN1O60240 522 aa13.08□□□□□ -0.32
ITGA6-207ENST00000458358 ST20-MTHFSA0A0A6YYL1 179 aa13.07□□□□□ -0.32
ITGA6-207ENST00000458358 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
ITGA6-207ENST00000458358 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
ITGA6-207ENST00000458358 MS4A1P11836 297 aa13.06□□□□□ -0.32
ITGA6-207ENST00000458358 CDCA7LQ96GN5 454 aa13.06□□□□□ -0.32
ITGA6-207ENST00000458358 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
ITGA6-207ENST00000458358 MYBBP1AQ9BQG0 1328 aaKnown RBP13.06□□□□□ -0.32
ITGA6-207ENST00000458358 KANK1Q14678 1352 aa13.05□□□□□ -0.32
ITGA6-207ENST00000458358 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
ITGA6-207ENST00000458358 ROCK2O75116 1388 aaKnown RBP13.04□□□□□ -0.32
ITGA6-207ENST00000458358 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
ITGA6-207ENST00000458358 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
ITGA6-207ENST00000458358 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
ITGA6-207ENST00000458358 GSE1Q14687 1217 aa13.03□□□□□ -0.32
ITGA6-207ENST00000458358 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
ITGA6-207ENST00000458358 RALBP1Q15311 655 aa13.02□□□□□ -0.32
ITGA6-207ENST00000458358 ABCC1P33527 1531 aa13.02□□□□□ -0.33
ITGA6-207ENST00000458358 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
ITGA6-207ENST00000458358 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
ITGA6-207ENST00000458358 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
ITGA6-207ENST00000458358 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
ITGA6-207ENST00000458358 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
ITGA6-207ENST00000458358 ADGBQ8N7X0 1667 aa13.01□□□□□ -0.33
ITGA6-207ENST00000458358 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
ITGA6-207ENST00000458358 SAFB2Q14151 953 aaKnown RBP eCLIP13□□□□□ -0.33
ITGA6-207ENST00000458358 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
ITGA6-207ENST00000458358 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
ITGA6-207ENST00000458358 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
ITGA6-207ENST00000458358 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
ITGA6-207ENST00000458358 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
ITGA6-207ENST00000458358 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
ITGA6-207ENST00000458358 KDM5CP41229 1560 aa12.98□□□□□ -0.33
ITGA6-207ENST00000458358 FBXO31Q5XUX0 539 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms