RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 DPYSL4O14531 572 aa7.96□□□□□ -1.14
SPARCL1-204ENST00000458304 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.14
SPARCL1-204ENST00000458304 JPH4Q96JJ6 628 aa7.96□□□□□ -1.14
SPARCL1-204ENST00000458304 DCAF1Q9Y4B6 1507 aa7.96□□□□□ -1.14
SPARCL1-204ENST00000458304 PSEN2P49810 448 aa7.95□□□□□ -1.14
SPARCL1-204ENST00000458304 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
SPARCL1-204ENST00000458304 DMRTA1Q5VZB9 504 aa7.94□□□□□ -1.14
SPARCL1-204ENST00000458304 BCL2L12Q9HB09 334 aa7.94□□□□□ -1.14
SPARCL1-204ENST00000458304 E2F4Q16254 413 aa7.93□□□□□ -1.14
SPARCL1-204ENST00000458304 CCDC9Q9Y3X0 531 aaKnown RBP7.93□□□□□ -1.14
SPARCL1-204ENST00000458304 ARIH1Q9Y4X5 557 aaPredicted RBP7.93□□□□□ -1.14
SPARCL1-204ENST00000458304 PTGER2P43116 358 aa7.92□□□□□ -1.14
SPARCL1-204ENST00000458304 ADAM33Q9BZ11 813 aa7.92□□□□□ -1.14
SPARCL1-204ENST00000458304 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
SPARCL1-204ENST00000458304 ADGRD1Q6QNK2 874 aa7.91□□□□□ -1.14
SPARCL1-204ENST00000458304 ZDHHC16Q969W1 377 aa7.91□□□□□ -1.14
SPARCL1-204ENST00000458304 TK2O00142 265 aa7.9□□□□□ -1.14
SPARCL1-204ENST00000458304 PHF14O94880 888 aa7.9□□□□□ -1.14
SPARCL1-204ENST00000458304 PDIA6Q15084 440 aa7.9□□□□□ -1.14
SPARCL1-204ENST00000458304 KCNK17Q96T54 332 aa7.9□□□□□ -1.14
SPARCL1-204ENST00000458304 WDR70Q9NW82 654 aa7.9□□□□□ -1.14
SPARCL1-204ENST00000458304 MYT1LQ9UL68 1186 aa7.9□□□□□ -1.14
SPARCL1-204ENST00000458304 MYO15BQ96JP2 1530 aa7.89□□□□□ -1.15
SPARCL1-204ENST00000458304 HRO43593 1189 aa7.89□□□□□ -1.15
SPARCL1-204ENST00000458304 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
SPARCL1-204ENST00000458304 RSPH6AQ9H0K4 717 aa7.89□□□□□ -1.15
SPARCL1-204ENST00000458304 PTPREP23469 700 aa7.88□□□□□ -1.15
SPARCL1-204ENST00000458304 NEUROD2Q15784 382 aa7.88□□□□□ -1.15
SPARCL1-204ENST00000458304 LMOD2Q6P5Q4 547 aa7.88□□□□□ -1.15
SPARCL1-204ENST00000458304 TYW1BQ6NUM6 668 aa7.87□□□□□ -1.15
SPARCL1-204ENST00000458304 SLC4A5Q9BY07 1137 aa7.87□□□□□ -1.15
SPARCL1-204ENST00000458304 ZMYND15Q9H091 742 aa7.87□□□□□ -1.15
SPARCL1-204ENST00000458304 ZBTB7CA1YPR0 619 aa7.86□□□□□ -1.15
SPARCL1-204ENST00000458304 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
SPARCL1-204ENST00000458304 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
SPARCL1-204ENST00000458304 ABCC9O60706 1549 aa7.86□□□□□ -1.15
SPARCL1-204ENST00000458304 NACADO15069 1562 aa7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 P3H3Q8IVL6 736 aa7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 KCNH8Q96L42 1107 aa7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 EPAS1Q99814 870 aa7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 ZBED2Q9BTP6 218 aa7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 VPS9D1Q9Y2B5 631 aa7.85□□□□□ -1.15
SPARCL1-204ENST00000458304 DDX12PQ92771 950 aa7.84□□□□□ -1.15
SPARCL1-204ENST00000458304 PPP1R3GB7ZBB8 358 aa7.82□□□□□ -1.16
SPARCL1-204ENST00000458304 BHMG1C9JSJ3 638 aaPredicted RBP7.82□□□□□ -1.16
SPARCL1-204ENST00000458304 COL9A1P20849 921 aa7.82□□□□□ -1.16
SPARCL1-204ENST00000458304 RB1CC1Q8TDY2 1594 aa7.81□□□□□ -1.16
SPARCL1-204ENST00000458304 PRIM1P49642 420 aaKnown RBP7.81□□□□□ -1.16
SPARCL1-204ENST00000458304 C6orf132Q5T0Z8 1188 aa7.81□□□□□ -1.16
SPARCL1-204ENST00000458304 KCNV2Q8TDN2 545 aa7.81□□□□□ -1.16
SPARCL1-204ENST00000458304 ARID3AQ99856 593 aa7.81□□□□□ -1.16
SPARCL1-204ENST00000458304 EN1Q05925 392 aaPredicted RBP7.8□□□□□ -1.16
SPARCL1-204ENST00000458304 PDIA4P13667 645 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-204ENST00000458304 ARHGEF1Q92888 912 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-204ENST00000458304 PROX2Q3B8N5 592 aa7.78□□□□□ -1.16
SPARCL1-204ENST00000458304 RBM33Q96EV2 1170 aaKnown RBP7.78□□□□□ -1.16
SPARCL1-204ENST00000458304 OSBPP22059 807 aa7.77□□□□□ -1.17
SPARCL1-204ENST00000458304 TSR1Q2NL82 804 aaKnown RBP7.77□□□□□ -1.17
SPARCL1-204ENST00000458304 GRXCR2A6NFK2 248 aa7.76□□□□□ -1.17
SPARCL1-204ENST00000458304 MAP3K7O43318 606 aa7.75□□□□□ -1.17
SPARCL1-204ENST00000458304 ONECUT3O60422 494 aaPredicted RBP7.75□□□□□ -1.17
SPARCL1-204ENST00000458304 RABGEF1Q9UJ41 708 aa7.75□□□□□ -1.17
SPARCL1-204ENST00000458304 LOC105371045A0A1W2PR82 267 aa7.74□□□□□ -1.17
SPARCL1-204ENST00000458304 SHROOM4Q9ULL8 1493 aa7.74□□□□□ -1.17
SPARCL1-204ENST00000458304 ZC3H15Q8WU90 426 aaKnown RBP7.73□□□□□ -1.17
SPARCL1-204ENST00000458304 KCTD12Q96CX2 325 aaKnown RBP7.73□□□□□ -1.17
SPARCL1-204ENST00000458304 TRIM6-TRIM34B2RNG4 842 aa7.72□□□□□ -1.17
SPARCL1-204ENST00000458304 MLLT3P42568 568 aaPredicted RBP7.72□□□□□ -1.17
SPARCL1-204ENST00000458304 MRPL50Q8N5N7 158 aaKnown RBP7.72□□□□□ -1.17
SPARCL1-204ENST00000458304 STAC3Q96MF2 364 aa7.72□□□□□ -1.17
SPARCL1-204ENST00000458304 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
SPARCL1-204ENST00000458304 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
SPARCL1-204ENST00000458304 CDHR5Q9HBB8 845 aa7.71□□□□□ -1.18
SPARCL1-204ENST00000458304 SLC24A3Q9HC58 644 aa7.71□□□□□ -1.18
SPARCL1-204ENST00000458304 KIAA1468Q9P260 1216 aa7.71□□□□□ -1.18
SPARCL1-204ENST00000458304 HCSTQ9UBK5 93 aa7.71□□□□□ -1.18
SPARCL1-204ENST00000458304 TSKSQ9UJT2 592 aa7.7□□□□□ -1.18
SPARCL1-204ENST00000458304 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
SPARCL1-204ENST00000458304 NECTIN2Q92692 538 aa7.69□□□□□ -1.18
SPARCL1-204ENST00000458304 FAM198AQ9UFP1 575 aa7.69□□□□□ -1.18
SPARCL1-204ENST00000458304 EIF5BO60841 1220 aaKnown RBP7.68□□□□□ -1.18
SPARCL1-204ENST00000458304 THSD4Q6ZMP0 1018 aa7.68□□□□□ -1.18
SPARCL1-204ENST00000458304 LAPTM4BQ86VI4 370 aa7.68□□□□□ -1.18
SPARCL1-204ENST00000458304 CDCA7LQ96GN5 454 aa7.68□□□□□ -1.18
SPARCL1-204ENST00000458304 NPDC1Q9NQX5 325 aaPredicted RBP7.68□□□□□ -1.18
SPARCL1-204ENST00000458304 PRSS12P56730 875 aa7.67□□□□□ -1.18
SPARCL1-204ENST00000458304 WNT2BQ93097 391 aa7.67□□□□□ -1.18
SPARCL1-204ENST00000458304 SEMA3EO15041 775 aa7.66□□□□□ -1.18
SPARCL1-204ENST00000458304 SEPT9Q9UHD8 586 aaPredicted RBP7.66□□□□□ -1.18
SPARCL1-204ENST00000458304 SCRIBQ14160 1630 aa7.66□□□□□ -1.18
SPARCL1-204ENST00000458304 GOLGA8CPA6NN73 597 aa7.65□□□□□ -1.18
SPARCL1-204ENST00000458304 APBB1O00213 710 aa7.65□□□□□ -1.18
SPARCL1-204ENST00000458304 C3orf80F5H4A9 247 aa7.64□□□□□ -1.19
SPARCL1-204ENST00000458304 HMGB1P09429 215 aaKnown RBP7.64□□□□□ -1.19
SPARCL1-204ENST00000458304 FAM98CQ17RN3 349 aaKnown RBP7.64□□□□□ -1.19
SPARCL1-204ENST00000458304 TTC13Q8NBP0 860 aa7.64□□□□□ -1.19
SPARCL1-204ENST00000458304 ZFRQ96KR1 1074 aaKnown RBP7.64□□□□□ -1.19
SPARCL1-204ENST00000458304 RBM27Q9P2N5 1060 aaKnown RBP7.64□□□□□ -1.19
SPARCL1-204ENST00000458304 PTPN5P54829 565 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms