RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 STAC3Q96MF2 364 aa7.55□□□□□ -1.2
HMGB3P30-201ENST00000457863 NBPF3Q9H094 633 aa7.55□□□□□ -1.2
HMGB3P30-201ENST00000457863 KCTD12Q96CX2 325 aaKnown RBP7.54□□□□□ -1.2
HMGB3P30-201ENST00000457863 CFAP44Q96MT7 982 aa7.54□□□□□ -1.2
HMGB3P30-201ENST00000457863 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P30-201ENST00000457863 COL9A1P20849 921 aa7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 E2F4Q16254 413 aa7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 RABGEF1Q9UJ41 708 aa7.52□□□□□ -1.21
HMGB3P30-201ENST00000457863 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
HMGB3P30-201ENST00000457863 ONECUT3O60422 494 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 PROX2Q3B8N5 592 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 C6orf132Q5T0Z8 1188 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 DDX12PQ92771 950 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
HMGB3P30-201ENST00000457863 PRKCSHP14314 528 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P30-201ENST00000457863 EN1Q05925 392 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P30-201ENST00000457863 LAPTM4BQ86VI4 370 aa7.49□□□□□ -1.21
HMGB3P30-201ENST00000457863 NBR1Q14596 966 aa7.48□□□□□ -1.21
HMGB3P30-201ENST00000457863 WNT2BQ93097 391 aa7.48□□□□□ -1.21
HMGB3P30-201ENST00000457863 WDR70Q9NW82 654 aa7.48□□□□□ -1.21
HMGB3P30-201ENST00000457863 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
HMGB3P30-201ENST00000457863 TRIM6-TRIM34B2RNG4 842 aa7.46□□□□□ -1.22
HMGB3P30-201ENST00000457863 PTPN5P54829 565 aa7.45□□□□□ -1.22
HMGB3P30-201ENST00000457863 RBM33Q96EV2 1170 aaKnown RBP7.45□□□□□ -1.22
HMGB3P30-201ENST00000457863 MAP3K7O43318 606 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 IFFO2Q5TF58 517 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 ANKK1Q8NFD2 765 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 KIAA1468Q9P260 1216 aa7.44□□□□□ -1.22
HMGB3P30-201ENST00000457863 TSR1Q2NL82 804 aaKnown RBP7.43□□□□□ -1.22
HMGB3P30-201ENST00000457863 ARXQ96QS3 562 aa7.43□□□□□ -1.22
HMGB3P30-201ENST00000457863 CERKQ8TCT0 537 aa7.42□□□□□ -1.22
HMGB3P30-201ENST00000457863 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
HMGB3P30-201ENST00000457863 FAM98CQ17RN3 349 aaKnown RBP7.41□□□□□ -1.22
HMGB3P30-201ENST00000457863 ZFRQ96KR1 1074 aaKnown RBP7.41□□□□□ -1.22
HMGB3P30-201ENST00000457863 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
HMGB3P30-201ENST00000457863 SEPT9Q9UHD8 586 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P30-201ENST00000457863 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
HMGB3P30-201ENST00000457863 OSBPP22059 807 aa7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 NYAP1Q6ZVC0 841 aa7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 RBM27Q9P2N5 1060 aaKnown RBP7.39□□□□□ -1.23
HMGB3P30-201ENST00000457863 GRXCR2A6NFK2 248 aa7.38□□□□□ -1.23
HMGB3P30-201ENST00000457863 BCAMP50895 628 aa7.38□□□□□ -1.23
HMGB3P30-201ENST00000457863 PACS2Q86VP3 889 aa7.38□□□□□ -1.23
HMGB3P30-201ENST00000457863 PRSS12P56730 875 aa7.37□□□□□ -1.23
HMGB3P30-201ENST00000457863 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
HMGB3P30-201ENST00000457863 CDCA7LQ96GN5 454 aa7.37□□□□□ -1.23
HMGB3P30-201ENST00000457863 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P30-201ENST00000457863 KCNV2Q8TDN2 545 aa7.36□□□□□ -1.23
HMGB3P30-201ENST00000457863 CDHR5Q9HBB8 845 aa7.35□□□□□ -1.23
HMGB3P30-201ENST00000457863 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
HMGB3P30-201ENST00000457863 A0A0G2JS52 829 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 NBPF26B4DH59 902 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 BCANQ96GW7 911 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 LRCH3Q96II8 777 aa7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P30-201ENST00000457863 RGS20O76081 388 aa7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 TSR3Q9UJK0 312 aaKnown RBP7.33□□□□□ -1.24
HMGB3P30-201ENST00000457863 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
HMGB3P30-201ENST00000457863 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P30-201ENST00000457863 HPS5Q9UPZ3 1129 aa7.31□□□□□ -1.24
HMGB3P30-201ENST00000457863 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
HMGB3P30-201ENST00000457863 TATDN2Q93075 761 aa7.3□□□□□ -1.24
HMGB3P30-201ENST00000457863 SMAPO00193 183 aa7.29□□□□□ -1.24
HMGB3P30-201ENST00000457863 MLLT3P42568 568 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P30-201ENST00000457863 PNMA3Q9UL41 463 aa7.29□□□□□ -1.24
HMGB3P30-201ENST00000457863 PLCB2Q00722 1185 aa7.28□□□□□ -1.24
HMGB3P30-201ENST00000457863 SAMD7Q7Z3H4 446 aa7.28□□□□□ -1.24
HMGB3P30-201ENST00000457863 TIMELESSQ9UNS1 1208 aa7.28□□□□□ -1.24
HMGB3P30-201ENST00000457863 PADI6Q6TGC4 694 aa7.27□□□□□ -1.25
HMGB3P30-201ENST00000457863 NUDT18Q6ZVK8 323 aa7.27□□□□□ -1.25
HMGB3P30-201ENST00000457863 PPP4CP60510 307 aa7.25□□□□□ -1.25
HMGB3P30-201ENST00000457863 KCNC4Q03721 635 aa7.25□□□□□ -1.25
HMGB3P30-201ENST00000457863 PTGDRQ13258 359 aa7.24□□□□□ -1.25
HMGB3P30-201ENST00000457863 NECTIN2Q92692 538 aa7.24□□□□□ -1.25
HMGB3P30-201ENST00000457863 EYA1Q99502 592 aa7.22□□□□□ -1.25
HMGB3P30-201ENST00000457863 HDGFP51858 240 aaKnown RBP7.21□□□□□ -1.26
HMGB3P30-201ENST00000457863 TJAP1Q5JTD0 557 aa7.21□□□□□ -1.26
HMGB3P30-201ENST00000457863 TULP1O00294 542 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 SEMA3EO15041 775 aa7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 TPRNQ4KMQ1 711 aa7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 SLF2Q8IX21 1173 aa7.2□□□□□ -1.26
HMGB3P30-201ENST00000457863 MTRQ99707 1265 aa7.19□□□□□ -1.26
HMGB3P30-201ENST00000457863 IL21Q9HBE4 155 aa7.19□□□□□ -1.26
HMGB3P30-201ENST00000457863 TESPA1A2RU30 521 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 RNF40O75150 1001 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 DNAJB2P25686 324 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 APLP1P51693 650 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
HMGB3P30-201ENST00000457863 FCHSD2O94868 740 aa7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 RBM46Q8TBY0 533 aaKnown RBP7.17□□□□□ -1.26
HMGB3P30-201ENST00000457863 NUTM2FA1L443 756 aa7.16□□□□□ -1.26
HMGB3P30-201ENST00000457863 TMEM134Q9H6X4 195 aa7.16□□□□□ -1.26
HMGB3P30-201ENST00000457863 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms