RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
LINC01546-201ENST00000457435 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
LINC01546-201ENST00000457435 BBXQ8WY36 941 aaPredicted RBP9.99□□□□□ -0.81
LINC01546-201ENST00000457435 EPAS1Q99814 870 aa9.99□□□□□ -0.81
LINC01546-201ENST00000457435 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
LINC01546-201ENST00000457435 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
LINC01546-201ENST00000457435 C6orf132Q5T0Z8 1188 aa9.98□□□□□ -0.81
LINC01546-201ENST00000457435 DDX12PQ92771 950 aa9.98□□□□□ -0.81
LINC01546-201ENST00000457435 BCAMP50895 628 aa9.96□□□□□ -0.82
LINC01546-201ENST00000457435 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
LINC01546-201ENST00000457435 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
LINC01546-201ENST00000457435 SEPT9Q9UHD8 586 aaPredicted RBP9.94□□□□□ -0.82
LINC01546-201ENST00000457435 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
LINC01546-201ENST00000457435 ZFRQ96KR1 1074 aaKnown RBP9.93□□□□□ -0.82
LINC01546-201ENST00000457435 A0A0G2JS52 829 aa9.92□□□□□ -0.82
LINC01546-201ENST00000457435 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
LINC01546-201ENST00000457435 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
LINC01546-201ENST00000457435 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
LINC01546-201ENST00000457435 TRIM6-TRIM34B2RNG4 842 aa9.9□□□□□ -0.82
LINC01546-201ENST00000457435 MAP3K7O43318 606 aa9.9□□□□□ -0.82
LINC01546-201ENST00000457435 RGS20O76081 388 aa9.9□□□□□ -0.82
LINC01546-201ENST00000457435 NBR1Q14596 966 aa9.9□□□□□ -0.82
LINC01546-201ENST00000457435 WBP1LQ9NX94 342 aa9.89□□□□□ -0.83
LINC01546-201ENST00000457435 FAM98CQ17RN3 349 aaKnown RBP9.87□□□□□ -0.83
LINC01546-201ENST00000457435 PACS2Q86VP3 889 aa9.87□□□□□ -0.83
LINC01546-201ENST00000457435 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
LINC01546-201ENST00000457435 TSR1Q2NL82 804 aaKnown RBP9.86□□□□□ -0.83
LINC01546-201ENST00000457435 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
LINC01546-201ENST00000457435 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.86□□□□□ -0.83
LINC01546-201ENST00000457435 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
LINC01546-201ENST00000457435 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
LINC01546-201ENST00000457435 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
LINC01546-201ENST00000457435 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
LINC01546-201ENST00000457435 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
LINC01546-201ENST00000457435 PDIA6Q15084 440 aa9.84□□□□□ -0.83
LINC01546-201ENST00000457435 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
LINC01546-201ENST00000457435 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
LINC01546-201ENST00000457435 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
LINC01546-201ENST00000457435 KCNC4Q03721 635 aa9.83□□□□□ -0.84
LINC01546-201ENST00000457435 E2F4Q16254 413 aa9.83□□□□□ -0.84
LINC01546-201ENST00000457435 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
LINC01546-201ENST00000457435 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
LINC01546-201ENST00000457435 TSR3Q9UJK0 312 aaKnown RBP9.83□□□□□ -0.84
LINC01546-201ENST00000457435 TSKSQ9UJT2 592 aa9.82□□□□□ -0.84
LINC01546-201ENST00000457435 PPP4CP60510 307 aa9.8□□□□□ -0.84
LINC01546-201ENST00000457435 SMAPO00193 183 aa9.79□□□□□ -0.84
LINC01546-201ENST00000457435 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
LINC01546-201ENST00000457435 PRSS12P56730 875 aa9.78□□□□□ -0.84
LINC01546-201ENST00000457435 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
LINC01546-201ENST00000457435 CERKQ8TCT0 537 aa9.76□□□□□ -0.85
LINC01546-201ENST00000457435 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
LINC01546-201ENST00000457435 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
LINC01546-201ENST00000457435 PNMA3Q9UL41 463 aa9.75□□□□□ -0.85
LINC01546-201ENST00000457435 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
LINC01546-201ENST00000457435 TATDN2Q93075 761 aa9.73□□□□□ -0.85
LINC01546-201ENST00000457435 FAM198AQ9UFP1 575 aa9.73□□□□□ -0.85
LINC01546-201ENST00000457435 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
LINC01546-201ENST00000457435 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
LINC01546-201ENST00000457435 RNF40O75150 1001 aa9.71□□□□□ -0.86
LINC01546-201ENST00000457435 OSBPP22059 807 aa9.7□□□□□ -0.86
LINC01546-201ENST00000457435 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
LINC01546-201ENST00000457435 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
LINC01546-201ENST00000457435 NUDT18Q6ZVK8 323 aa9.69□□□□□ -0.86
LINC01546-201ENST00000457435 Q6ZNB5 142 aa9.68□□□□□ -0.86
LINC01546-201ENST00000457435 TJAP1Q5JTD0 557 aa9.66□□□□□ -0.86
LINC01546-201ENST00000457435 MTRQ99707 1265 aa9.65□□□□□ -0.86
LINC01546-201ENST00000457435 IL21Q9HBE4 155 aa9.64□□□□□ -0.87
LINC01546-201ENST00000457435 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
LINC01546-201ENST00000457435 RBM27Q9P2N5 1060 aaKnown RBP9.62□□□□□ -0.87
LINC01546-201ENST00000457435 ZNF516Q92618 1163 aa9.61□□□□□ -0.87
LINC01546-201ENST00000457435 GFRA3O60609 400 aa9.6□□□□□ -0.87
LINC01546-201ENST00000457435 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
LINC01546-201ENST00000457435 APLP1P51693 650 aa9.6□□□□□ -0.87
LINC01546-201ENST00000457435 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
LINC01546-201ENST00000457435 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
LINC01546-201ENST00000457435 PPP1R18Q6NYC8 613 aa9.59□□□□□ -0.87
LINC01546-201ENST00000457435 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
LINC01546-201ENST00000457435 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
LINC01546-201ENST00000457435 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
LINC01546-201ENST00000457435 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
LINC01546-201ENST00000457435 COPS2P61201 443 aa9.57□□□□□ -0.88
LINC01546-201ENST00000457435 TTC13Q8NBP0 860 aa9.57□□□□□ -0.88
LINC01546-201ENST00000457435 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
LINC01546-201ENST00000457435 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
LINC01546-201ENST00000457435 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.56□□□□□ -0.88
LINC01546-201ENST00000457435 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
LINC01546-201ENST00000457435 ARHGEF1Q92888 912 aaKnown RBP9.54□□□□□ -0.88
LINC01546-201ENST00000457435 GGCXP38435 758 aa9.53□□□□□ -0.88
LINC01546-201ENST00000457435 EYA1Q99502 592 aa9.52□□□□□ -0.89
LINC01546-201ENST00000457435 NUTM2FA1L443 756 aa9.51□□□□□ -0.89
LINC01546-201ENST00000457435 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
LINC01546-201ENST00000457435 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
LINC01546-201ENST00000457435 KCNV2Q8TDN2 545 aa9.5□□□□□ -0.89
LINC01546-201ENST00000457435 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
LINC01546-201ENST00000457435 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
LINC01546-201ENST00000457435 ZPR1O75312 459 aa9.48□□□□□ -0.89
LINC01546-201ENST00000457435 RBM46Q8TBY0 533 aaKnown RBP9.48□□□□□ -0.89
LINC01546-201ENST00000457435 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
LINC01546-201ENST00000457435 DNAJB2P25686 324 aa9.47□□□□□ -0.89
LINC01546-201ENST00000457435 PTGDRQ13258 359 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms