RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FRAT2O75474 233 aaPredicted RBP6.19□□□□□ -1.42
PCDH9-203ENST00000456367 BRD2P25440 801 aaKnown RBP6.19□□□□□ -1.42
PCDH9-203ENST00000456367 ZMYND15Q9H091 742 aa6.19□□□□□ -1.42
PCDH9-203ENST00000456367 CFDP1Q9UEE9 299 aaPredicted RBP6.19□□□□□ -1.42
PCDH9-203ENST00000456367 BRD4O60885 1362 aaPredicted RBP6.19□□□□□ -1.42
PCDH9-203ENST00000456367 L3MBTL2Q969R5 705 aa6.19□□□□□ -1.42
PCDH9-203ENST00000456367 CIZ1Q9ULV3 898 aaPredicted RBP6.19□□□□□ -1.42
PCDH9-203ENST00000456367 CCDC7Q96M83 1385 aa6.19□□□□□ -1.42
PCDH9-203ENST00000456367 ARID3CA6NKF2 412 aa6.18□□□□□ -1.42
PCDH9-203ENST00000456367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.18□□□□□ -1.42
PCDH9-203ENST00000456367 ARGLU1Q9NWB6 273 aaPredicted RBP6.18□□□□□ -1.42
PCDH9-203ENST00000456367 ANKRD30AQ9BXX3 1397 aa6.18□□□□□ -1.42
PCDH9-203ENST00000456367 SENP3-EIF4A1A0A087X0R7 540 aa6.18□□□□□ -1.42
PCDH9-203ENST00000456367 MBD3O95983 291 aa6.18□□□□□ -1.42
PCDH9-203ENST00000456367 NEUROD2Q15784 382 aa6.18□□□□□ -1.42
PCDH9-203ENST00000456367 GRPEL1Q9HAV7 217 aa6.18□□□□□ -1.42
PCDH9-203ENST00000456367 KIAA1211Q6ZU35 1233 aa6.17□□□□□ -1.42
PCDH9-203ENST00000456367 CARMIL1Q5VZK9 1371 aa6.17□□□□□ -1.42
PCDH9-203ENST00000456367 LETM1O95202 739 aaPredicted RBP6.17□□□□□ -1.42
PCDH9-203ENST00000456367 ZSCAN30Q86W11 494 aa6.17□□□□□ -1.42
PCDH9-203ENST00000456367 NINLQ9Y2I6 1382 aa6.17□□□□□ -1.42
PCDH9-203ENST00000456367 DCAF11Q8TEB1 546 aa6.17□□□□□ -1.42
PCDH9-203ENST00000456367 CLCN1P35523 988 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 CAVIN1Q6NZI2 390 aaKnown RBP6.16□□□□□ -1.42
PCDH9-203ENST00000456367 CHMP4CQ96CF2 233 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 RRBP1Q9P2E9 1410 aaKnown RBP6.16□□□□□ -1.42
PCDH9-203ENST00000456367 CHGAP10645 457 aaKnown RBP6.16□□□□□ -1.42
PCDH9-203ENST00000456367 RGL3Q3MIN7 710 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 ITPRIPQ8IWB1 547 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 KIF3AQ9Y496 699 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 TOP2AP11388 1531 aaKnown RBP6.16□□□□□ -1.42
PCDH9-203ENST00000456367 ABCC8Q09428 1581 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 PLEKHD1A6NEE1 506 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 MCM5P33992 734 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 KCNJ4P48050 445 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 DHX8Q14562 1220 aaKnown RBP6.16□□□□□ -1.42
PCDH9-203ENST00000456367 C22orf23Q9BZE7 217 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 WASHC2AQ641Q2 1341 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 HMMRO75330 724 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 APPP05067 770 aa6.16□□□□□ -1.42
PCDH9-203ENST00000456367 HSP90B1P14625 803 aaKnown RBP6.16□□□□□ -1.42
PCDH9-203ENST00000456367 UACAQ9BZF9 1416 aa6.15□□□□□ -1.42
PCDH9-203ENST00000456367 CCDC34Q96HJ3 373 aa6.15□□□□□ -1.42
PCDH9-203ENST00000456367 CCDC18Q5T9S5 1454 aa6.15□□□□□ -1.42
PCDH9-203ENST00000456367 MORC1Q86VD1 984 aa6.15□□□□□ -1.42
PCDH9-203ENST00000456367 ACBD3Q9H3P7 528 aa6.15□□□□□ -1.42
PCDH9-203ENST00000456367 WASHC2CQ9Y4E1 1318 aa6.15□□□□□ -1.43
PCDH9-203ENST00000456367 MCM4P33991 863 aa6.15□□□□□ -1.43
PCDH9-203ENST00000456367 FGD1P98174 961 aa6.15□□□□□ -1.43
PCDH9-203ENST00000456367 CHMP4AQ9BY43 222 aa6.15□□□□□ -1.43
PCDH9-203ENST00000456367 REC8O95072 547 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 CECR2Q9BXF3 1484 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 ZKSCAN2Q63HK3 967 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 MROH2BQ7Z745 1585 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 GOLGA6L19H0YKK7 550 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 UQCRHLA0A096LP55 91 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 UQCRHP07919 91 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 DDX19BQ9UMR2 479 aa6.14□□□□□ -1.43
PCDH9-203ENST00000456367 MIA2Q96PC5 1412 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 SMC4Q9NTJ3 1288 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 DYNC1I1O14576 645 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 PKD2Q13563 968 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 SASS6Q6UVJ0 657 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 PDE3AQ14432 1141 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 CLUAP1Q96AJ1 413 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 USP47Q96K76 1375 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 CWC22Q9HCG8 908 aaKnown RBP6.13□□□□□ -1.43
PCDH9-203ENST00000456367 HDAC5Q9UQL6 1122 aa6.13□□□□□ -1.43
PCDH9-203ENST00000456367 RNF20Q5VTR2 975 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 MCM2P49736 904 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 FAM184AQ8NB25 1140 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 RAPGEF2Q9Y4G8 1499 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 KIF21BO75037 1637 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 PLIN1O60240 522 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 CALCOCO1Q9P1Z2 691 aa6.12□□□□□ -1.43
PCDH9-203ENST00000456367 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
PCDH9-203ENST00000456367 KIF7Q2M1P5 1343 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 U2SURPO15042 1029 aaKnown RBP6.11□□□□□ -1.43
PCDH9-203ENST00000456367 CCP110O43303 1012 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 ZBTB7CA1YPR0 619 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 USP8P40818 1118 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 CCDC70Q6NSX1 233 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 BECN2A8MW95 431 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 FBLN2P98095 1184 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 TSPY26PQ9H489 355 aa6.11□□□□□ -1.43
PCDH9-203ENST00000456367 AK7Q96M32 723 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 BCL11BQ9C0K0 894 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-203ENST00000456367 CUX2O14529 1486 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 OS9Q13438 667 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-203ENST00000456367 GTPBP4Q9BZE4 634 aaKnown RBP6.1□□□□□ -1.43
PCDH9-203ENST00000456367 STAG3Q9UJ98 1225 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 LMOD3Q0VAK6 560 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 ERCC4Q92889 916 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-203ENST00000456367 FOXD4L1Q9NU39 408 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 TERF1P54274 439 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 MCTP1Q6DN14 999 aa6.1□□□□□ -1.43
PCDH9-203ENST00000456367 DHX37Q8IY37 1157 aaKnown RBP6.1□□□□□ -1.43
PCDH9-203ENST00000456367 RABEP1Q15276 862 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 HSP90B2PQ58FF3 399 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 INTS3Q68E01 1043 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms