RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
LINC01940-201ENST00000455228 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
LINC01940-201ENST00000455228 MIA2Q96PC5 1412 aa12.61□□□□□ -0.39
LINC01940-201ENST00000455228 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
LINC01940-201ENST00000455228 RPRD2Q5VT52 1461 aaKnown RBP12.6□□□□□ -0.39
LINC01940-201ENST00000455228 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
LINC01940-201ENST00000455228 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
LINC01940-201ENST00000455228 TPM2P07951 284 aa12.59□□□□□ -0.39
LINC01940-201ENST00000455228 ARID3AQ99856 593 aa12.58□□□□□ -0.39
LINC01940-201ENST00000455228 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
LINC01940-201ENST00000455228 CDK13Q14004 1512 aaKnown RBP12.56□□□□□ -0.4
LINC01940-201ENST00000455228 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
LINC01940-201ENST00000455228 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
LINC01940-201ENST00000455228 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
LINC01940-201ENST00000455228 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
LINC01940-201ENST00000455228 USP47Q96K76 1375 aa12.55□□□□□ -0.4
LINC01940-201ENST00000455228 TEX14Q8IWB6 1497 aa12.55□□□□□ -0.4
LINC01940-201ENST00000455228 TERF1P54274 439 aa12.55□□□□□ -0.4
LINC01940-201ENST00000455228 DAPK1P53355 1430 aa12.55□□□□□ -0.4
LINC01940-201ENST00000455228 ROCK1Q13464 1354 aa12.55□□□□□ -0.4
LINC01940-201ENST00000455228 SLC20A2Q08357 652 aa12.54□□□□□ -0.4
LINC01940-201ENST00000455228 MAP7D2Q96T17 732 aa12.54□□□□□ -0.4
LINC01940-201ENST00000455228 ABCA5Q8WWZ7 1642 aa12.53□□□□□ -0.4
LINC01940-201ENST00000455228 ZNF777Q9ULD5 760 aaPredicted RBP12.53□□□□□ -0.4
LINC01940-201ENST00000455228 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
LINC01940-201ENST00000455228 ZNF830Q96NB3 372 aaPredicted RBP12.53□□□□□ -0.4
LINC01940-201ENST00000455228 KIF21AQ7Z4S6 1674 aa12.53□□□□□ -0.4
LINC01940-201ENST00000455228 DHX29Q7Z478 1369 aaKnown RBP12.52□□□□□ -0.4
LINC01940-201ENST00000455228 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.4
LINC01940-201ENST00000455228 RNF123Q5XPI4 1314 aa12.52□□□□□ -0.41
LINC01940-201ENST00000455228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01940-201ENST00000455228 ABCC5O15440 1437 aa12.51□□□□□ -0.41
LINC01940-201ENST00000455228 LAMC3Q9Y6N6 1575 aa12.51□□□□□ -0.41
LINC01940-201ENST00000455228 DMTNQ08495 405 aa12.51□□□□□ -0.41
LINC01940-201ENST00000455228 PKD2Q13563 968 aa12.51□□□□□ -0.41
LINC01940-201ENST00000455228 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
LINC01940-201ENST00000455228 CFDP1Q9UEE9 299 aaPredicted RBP12.5□□□□□ -0.41
LINC01940-201ENST00000455228 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
LINC01940-201ENST00000455228 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
LINC01940-201ENST00000455228 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
LINC01940-201ENST00000455228 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
LINC01940-201ENST00000455228 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
LINC01940-201ENST00000455228 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
LINC01940-201ENST00000455228 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
LINC01940-201ENST00000455228 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
LINC01940-201ENST00000455228 KIF15Q9NS87 1388 aa12.47□□□□□ -0.41
LINC01940-201ENST00000455228 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
LINC01940-201ENST00000455228 EXOC6Q8TAG9 804 aa12.47□□□□□ -0.41
LINC01940-201ENST00000455228 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
LINC01940-201ENST00000455228 POLR1AO95602 1720 aaPredicted RBP12.47□□□□□ -0.41
LINC01940-201ENST00000455228 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
LINC01940-201ENST00000455228 KIF20AO95235 890 aa12.46□□□□□ -0.41
LINC01940-201ENST00000455228 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.41
LINC01940-201ENST00000455228 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
LINC01940-201ENST00000455228 WDR62O43379 1518 aa12.45□□□□□ -0.42
LINC01940-201ENST00000455228 RALBP1Q15311 655 aa12.45□□□□□ -0.42
LINC01940-201ENST00000455228 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
LINC01940-201ENST00000455228 MYBBP1AQ9BQG0 1328 aaKnown RBP12.45□□□□□ -0.42
LINC01940-201ENST00000455228 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
LINC01940-201ENST00000455228 ST20-MTHFSA0A0A6YYL1 179 aa12.45□□□□□ -0.42
LINC01940-201ENST00000455228 PDE4AP27815 886 aa12.43□□□□□ -0.42
LINC01940-201ENST00000455228 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
LINC01940-201ENST00000455228 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
LINC01940-201ENST00000455228 PZPP20742 1482 aa12.43□□□□□ -0.42
LINC01940-201ENST00000455228 CDK11BP21127 795 aaKnown RBP12.43□□□□□ -0.42
LINC01940-201ENST00000455228 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
LINC01940-201ENST00000455228 ANKRD30AQ9BXX3 1397 aa12.42□□□□□ -0.42
LINC01940-201ENST00000455228 BCORL1Q5H9F3 1711 aa12.42□□□□□ -0.42
LINC01940-201ENST00000455228 PSEN1P49768 467 aa12.41□□□□□ -0.42
LINC01940-201ENST00000455228 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
LINC01940-201ENST00000455228 NUP155O75694 1391 aa12.41□□□□□ -0.42
LINC01940-201ENST00000455228 MTERF4Q7Z6M4 381 aaKnown RBP12.41□□□□□ -0.42
LINC01940-201ENST00000455228 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
LINC01940-201ENST00000455228 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
LINC01940-201ENST00000455228 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
LINC01940-201ENST00000455228 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
LINC01940-201ENST00000455228 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
LINC01940-201ENST00000455228 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
LINC01940-201ENST00000455228 LRPPRCP42704 1394 aaKnown RBP12.39□□□□□ -0.43
LINC01940-201ENST00000455228 CAMSAP2Q08AD1 1489 aa12.39□□□□□ -0.43
LINC01940-201ENST00000455228 VIRMAQ69YN4 1812 aaKnown RBP12.38□□□□□ -0.43
LINC01940-201ENST00000455228 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
LINC01940-201ENST00000455228 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
LINC01940-201ENST00000455228 ANKRD50Q9ULJ7 1429 aa12.38□□□□□ -0.43
LINC01940-201ENST00000455228 KIF14Q15058 1648 aa12.38□□□□□ -0.43
LINC01940-201ENST00000455228 MS4A1P11836 297 aa12.38□□□□□ -0.43
LINC01940-201ENST00000455228 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
LINC01940-201ENST00000455228 KDM5CP41229 1560 aa12.38□□□□□ -0.43
LINC01940-201ENST00000455228 CLGNO14967 610 aa12.38□□□□□ -0.43
LINC01940-201ENST00000455228 ZSCAN20P17040 1043 aaPredicted RBP12.38□□□□□ -0.43
LINC01940-201ENST00000455228 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
LINC01940-201ENST00000455228 TSPY4P0CV99 314 aa12.37□□□□□ -0.43
LINC01940-201ENST00000455228 TSPY10P0CW01 314 aa12.37□□□□□ -0.43
LINC01940-201ENST00000455228 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
LINC01940-201ENST00000455228 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
LINC01940-201ENST00000455228 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
LINC01940-201ENST00000455228 PLIN1O60240 522 aa12.36□□□□□ -0.43
LINC01940-201ENST00000455228 TICAM2Q86XR7 235 aa12.36□□□□□ -0.43
LINC01940-201ENST00000455228 RALGAPBQ86X10 1494 aa12.36□□□□□ -0.43
LINC01940-201ENST00000455228 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms