RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PLA2R1Q13018 1463 aa7.95□□□□□ -1.14
RIF1-207ENST00000454583 ABCC3O15438 1527 aa7.95□□□□□ -1.14
RIF1-207ENST00000454583 NCBP3Q53F19 620 aaKnown RBP7.95□□□□□ -1.14
RIF1-207ENST00000454583 CD109Q6YHK3 1445 aa7.95□□□□□ -1.14
RIF1-207ENST00000454583 UBR1Q8IWV7 1749 aa7.94□□□□□ -1.14
RIF1-207ENST00000454583 TRPM2O94759 1503 aa7.94□□□□□ -1.14
RIF1-207ENST00000454583 C9orf84Q5VXU9 1444 aa7.94□□□□□ -1.14
RIF1-207ENST00000454583 TMEM131LA2VDJ0 1609 aa7.94□□□□□ -1.14
RIF1-207ENST00000454583 PTPRTO14522 1441 aa7.93□□□□□ -1.14
RIF1-207ENST00000454583 HRCP23327 699 aa7.92□□□□□ -1.14
RIF1-207ENST00000454583 ZNF644Q9H582 1327 aaPredicted RBP7.92□□□□□ -1.14
RIF1-207ENST00000454583 SCAF1Q9H7N4 1312 aaKnown RBP7.92□□□□□ -1.14
RIF1-207ENST00000454583 NRXN1Q9ULB1 1477 aa7.92□□□□□ -1.14
RIF1-207ENST00000454583 MTUS2Q5JR59 1369 aa7.91□□□□□ -1.14
RIF1-207ENST00000454583 MYO3AQ8NEV4 1616 aa7.91□□□□□ -1.14
RIF1-207ENST00000454583 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
RIF1-207ENST00000454583 TRPM1Q7Z4N2 1603 aa7.91□□□□□ -1.14
RIF1-207ENST00000454583 YEATS2Q9ULM3 1422 aa7.9□□□□□ -1.14
RIF1-207ENST00000454583 IQGAP1P46940 1657 aa7.9□□□□□ -1.14
RIF1-207ENST00000454583 ARHGAP31Q2M1Z3 1444 aa7.9□□□□□ -1.15
RIF1-207ENST00000454583 KCNA4P22459 653 aa7.9□□□□□ -1.15
RIF1-207ENST00000454583 UGGT1Q9NYU2 1555 aa7.89□□□□□ -1.15
RIF1-207ENST00000454583 KNDC1Q76NI1 1749 aa7.89□□□□□ -1.15
RIF1-207ENST00000454583 KIF1BO60333 1816 aa7.89□□□□□ -1.15
RIF1-207ENST00000454583 CNKSR2Q8WXI2 1034 aa7.88□□□□□ -1.15
RIF1-207ENST00000454583 DHX57Q6P158 1386 aaKnown RBP7.88□□□□□ -1.15
RIF1-207ENST00000454583 RPRD2Q5VT52 1461 aaKnown RBP7.87□□□□□ -1.15
RIF1-207ENST00000454583 NOS1P29475 1434 aa7.86□□□□□ -1.15
RIF1-207ENST00000454583 A2MP01023 1474 aa7.86□□□□□ -1.15
RIF1-207ENST00000454583 RIMS1Q86UR5 1692 aaKnown RBP7.86□□□□□ -1.15
RIF1-207ENST00000454583 SCAPERQ9BY12 1400 aa7.86□□□□□ -1.15
RIF1-207ENST00000454583 XIRP1Q702N8 1843 aaKnown RBP7.85□□□□□ -1.15
RIF1-207ENST00000454583 SETD5Q9C0A6 1442 aa7.85□□□□□ -1.15
RIF1-207ENST00000454583 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
RIF1-207ENST00000454583 STRCQ7RTU9 1775 aa7.84□□□□□ -1.15
RIF1-207ENST00000454583 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
RIF1-207ENST00000454583 RAB3GAP2Q9H2M9 1393 aa7.84□□□□□ -1.15
RIF1-207ENST00000454583 EHMT2Q96KQ7 1210 aa7.83□□□□□ -1.16
RIF1-207ENST00000454583 PRAG1Q86YV5 1406 aa7.83□□□□□ -1.16
RIF1-207ENST00000454583 TRIM26Q12899 539 aaPredicted RBP7.83□□□□□ -1.16
RIF1-207ENST00000454583 SPATA31E1Q6ZUB1 1445 aa7.83□□□□□ -1.16
RIF1-207ENST00000454583 STRCP1A6NGW2 1772 aa7.83□□□□□ -1.16
RIF1-207ENST00000454583 ASXL1Q8IXJ9 1541 aa7.82□□□□□ -1.16
RIF1-207ENST00000454583 PLEKHD1A6NEE1 506 aa7.81□□□□□ -1.16
RIF1-207ENST00000454583 MYOM1P52179 1685 aa7.81□□□□□ -1.16
RIF1-207ENST00000454583 ARHGEF28Q8N1W1 1705 aaKnown RBP7.81□□□□□ -1.16
RIF1-207ENST00000454583 CYB5RLQ6IPT4 315 aa7.81□□□□□ -1.16
RIF1-207ENST00000454583 ANKRD50Q9ULJ7 1429 aa7.8□□□□□ -1.16
RIF1-207ENST00000454583 ANKRD30BQ9BXX2 1392 aa7.8□□□□□ -1.16
RIF1-207ENST00000454583 XRN1Q8IZH2 1706 aaKnown RBP7.8□□□□□ -1.16
RIF1-207ENST00000454583 ADGRB1O14514 1584 aa7.8□□□□□ -1.16
RIF1-207ENST00000454583 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
RIF1-207ENST00000454583 RSPH4AQ5TD94 716 aa7.79□□□□□ -1.16
RIF1-207ENST00000454583 SLIT1O75093 1534 aa7.79□□□□□ -1.16
RIF1-207ENST00000454583 UHRF1BP1Q6BDS2 1440 aa7.79□□□□□ -1.16
RIF1-207ENST00000454583 MARF1Q9Y4F3 1742 aaKnown RBP7.78□□□□□ -1.16
RIF1-207ENST00000454583 USP54Q70EL1 1684 aa7.78□□□□□ -1.16
RIF1-207ENST00000454583 NPATQ14207 1427 aa7.78□□□□□ -1.16
RIF1-207ENST00000454583 KIF15Q9NS87 1388 aa7.78□□□□□ -1.16
RIF1-207ENST00000454583 ARHGAP23Q9P227 1491 aa7.78□□□□□ -1.16
RIF1-207ENST00000454583 TOPAZ1Q8N9V7 1692 aa7.78□□□□□ -1.16
RIF1-207ENST00000454583 MED14O60244 1454 aa7.77□□□□□ -1.16
RIF1-207ENST00000454583 MYOM2P54296 1465 aa7.77□□□□□ -1.16
RIF1-207ENST00000454583 NWD1Q149M9 1564 aa7.77□□□□□ -1.17
RIF1-207ENST00000454583 ERVK-7P63135 1459 aa7.77□□□□□ -1.17
RIF1-207ENST00000454583 CHD2O14647 1828 aaKnown RBP7.77□□□□□ -1.17
RIF1-207ENST00000454583 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
RIF1-207ENST00000454583 ZFYVE9O95405 1425 aa7.75□□□□□ -1.17
RIF1-207ENST00000454583 ANKRD30AQ9BXX3 1397 aa7.75□□□□□ -1.17
RIF1-207ENST00000454583 NPM3O75607 178 aaKnown RBP7.74□□□□□ -1.17
RIF1-207ENST00000454583 RNF216Q9NWF9 866 aaPredicted RBP7.74□□□□□ -1.17
RIF1-207ENST00000454583 PTPRMP28827 1452 aa7.74□□□□□ -1.17
RIF1-207ENST00000454583 RANGAP1P46060 587 aaPredicted RBP7.74□□□□□ -1.17
RIF1-207ENST00000454583 HNRNPMP52272 730 aaKnown RBP eCLIP7.73□□□□□ -1.17
RIF1-207ENST00000454583 DMRT2Q9Y5R5 561 aa7.73□□□□□ -1.17
RIF1-207ENST00000454583 EFCAB2Q5VUJ9 269 aa7.73□□□□□ -1.17
RIF1-207ENST00000454583 CEP170BQ9Y4F5 1589 aaPredicted RBP7.73□□□□□ -1.17
RIF1-207ENST00000454583 CFDP1Q9UEE9 299 aaPredicted RBP7.72□□□□□ -1.17
RIF1-207ENST00000454583 ADGRB2O60241 1585 aa7.72□□□□□ -1.17
RIF1-207ENST00000454583 CNTLNQ9NXG0 1405 aa7.72□□□□□ -1.17
RIF1-207ENST00000454583 CRYBG1Q9Y4K1 1723 aa7.72□□□□□ -1.17
RIF1-207ENST00000454583 CLSPNQ9HAW4 1339 aa7.71□□□□□ -1.17
RIF1-207ENST00000454583 HOXD11P31277 338 aaPredicted RBP7.71□□□□□ -1.17
RIF1-207ENST00000454583 AFAP1Q8N556 730 aa7.71□□□□□ -1.17
RIF1-207ENST00000454583 NRKQ7Z2Y5 1582 aa7.71□□□□□ -1.18
RIF1-207ENST00000454583 DIP2AQ14689 1571 aa7.7□□□□□ -1.18
RIF1-207ENST00000454583 CPS1P31327 1500 aa7.7□□□□□ -1.18
RIF1-207ENST00000454583 USP32Q8NFA0 1604 aa7.7□□□□□ -1.18
RIF1-207ENST00000454583 ALKQ9UM73 1620 aa7.7□□□□□ -1.18
RIF1-207ENST00000454583 FAM69CQ0P6D2 419 aa7.7□□□□□ -1.18
RIF1-207ENST00000454583 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
RIF1-207ENST00000454583 CFAP65Q6ZU64 1925 aaKnown RBP7.69□□□□□ -1.18
RIF1-207ENST00000454583 A2ML1A8K2U0 1454 aa7.69□□□□□ -1.18
RIF1-207ENST00000454583 ARID3CA6NKF2 412 aa7.69□□□□□ -1.18
RIF1-207ENST00000454583 AKAP12Q02952 1782 aa7.68□□□□□ -1.18
RIF1-207ENST00000454583 PCGF6Q9BYE7 350 aa7.68□□□□□ -1.18
RIF1-207ENST00000454583 PIK3C2GO75747 1445 aa7.67□□□□□ -1.18
RIF1-207ENST00000454583 ANKRD26Q9UPS8 1709 aa7.67□□□□□ -1.18
RIF1-207ENST00000454583 GPRASP1Q5JY77 1395 aa7.67□□□□□ -1.18
RIF1-207ENST00000454583 QRICH2Q9H0J4 1663 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms