RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
CUL3-208ENST00000454323 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
CUL3-208ENST00000454323 EPAS1Q99814 870 aa12.9□□□□□ -0.34
CUL3-208ENST00000454323 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
CUL3-208ENST00000454323 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
CUL3-208ENST00000454323 PROX2Q3B8N5 592 aa12.85□□□□□ -0.35
CUL3-208ENST00000454323 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
CUL3-208ENST00000454323 KCNC4Q03721 635 aa12.83□□□□□ -0.36
CUL3-208ENST00000454323 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
CUL3-208ENST00000454323 COL9A1P20849 921 aa12.82□□□□□ -0.36
CUL3-208ENST00000454323 BCAMP50895 628 aa12.81□□□□□ -0.36
CUL3-208ENST00000454323 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
CUL3-208ENST00000454323 FAM98CQ17RN3 349 aaKnown RBP12.79□□□□□ -0.36
CUL3-208ENST00000454323 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
CUL3-208ENST00000454323 LAPTM4AQ15012 233 aa12.78□□□□□ -0.36
CUL3-208ENST00000454323 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
CUL3-208ENST00000454323 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
CUL3-208ENST00000454323 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
CUL3-208ENST00000454323 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
CUL3-208ENST00000454323 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
CUL3-208ENST00000454323 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
CUL3-208ENST00000454323 Q6ZNB5 142 aa12.74□□□□□ -0.37
CUL3-208ENST00000454323 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
CUL3-208ENST00000454323 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
CUL3-208ENST00000454323 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
CUL3-208ENST00000454323 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
CUL3-208ENST00000454323 DPYSL4O14531 572 aa12.68□□□□□ -0.38
CUL3-208ENST00000454323 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CUL3-208ENST00000454323 PPP4CP60510 307 aa12.64□□□□□ -0.39
CUL3-208ENST00000454323 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
CUL3-208ENST00000454323 CERKQ8TCT0 537 aa12.64□□□□□ -0.39
CUL3-208ENST00000454323 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
CUL3-208ENST00000454323 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
CUL3-208ENST00000454323 MAP3K7O43318 606 aa12.62□□□□□ -0.39
CUL3-208ENST00000454323 DDX12PQ92771 950 aa12.62□□□□□ -0.39
CUL3-208ENST00000454323 NBR1Q14596 966 aa12.61□□□□□ -0.39
CUL3-208ENST00000454323 NECTIN2Q92692 538 aa12.61□□□□□ -0.39
CUL3-208ENST00000454323 HDGFP51858 240 aaKnown RBP12.58□□□□□ -0.4
CUL3-208ENST00000454323 PDIA6Q15084 440 aa12.58□□□□□ -0.4
CUL3-208ENST00000454323 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
CUL3-208ENST00000454323 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
CUL3-208ENST00000454323 IL21Q9HBE4 155 aa12.54□□□□□ -0.4
CUL3-208ENST00000454323 GFRA3O60609 400 aa12.53□□□□□ -0.4
CUL3-208ENST00000454323 PRSS12P56730 875 aa12.53□□□□□ -0.4
CUL3-208ENST00000454323 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
CUL3-208ENST00000454323 V9GY48 417 aaPredicted RBP12.51□□□□□ -0.41
CUL3-208ENST00000454323 TSR1Q2NL82 804 aaKnown RBP12.5□□□□□ -0.41
CUL3-208ENST00000454323 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
CUL3-208ENST00000454323 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
CUL3-208ENST00000454323 NRG2O14511 850 aaPredicted RBP12.49□□□□□ -0.41
CUL3-208ENST00000454323 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
CUL3-208ENST00000454323 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
CUL3-208ENST00000454323 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
CUL3-208ENST00000454323 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
CUL3-208ENST00000454323 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
CUL3-208ENST00000454323 GGCXP38435 758 aa12.47□□□□□ -0.41
CUL3-208ENST00000454323 TATDN2Q93075 761 aa12.46□□□□□ -0.41
CUL3-208ENST00000454323 MTRQ99707 1265 aa12.46□□□□□ -0.41
CUL3-208ENST00000454323 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
CUL3-208ENST00000454323 E2F4Q16254 413 aa12.43□□□□□ -0.42
CUL3-208ENST00000454323 ARIH1Q9Y4X5 557 aaPredicted RBP12.43□□□□□ -0.42
CUL3-208ENST00000454323 RNF40O75150 1001 aa12.42□□□□□ -0.42
CUL3-208ENST00000454323 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
CUL3-208ENST00000454323 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
CUL3-208ENST00000454323 WDR70Q9NW82 654 aa12.42□□□□□ -0.42
CUL3-208ENST00000454323 SMAPO00193 183 aa12.41□□□□□ -0.42
CUL3-208ENST00000454323 SLF2Q8IX21 1173 aa12.4□□□□□ -0.42
CUL3-208ENST00000454323 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
CUL3-208ENST00000454323 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
CUL3-208ENST00000454323 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
CUL3-208ENST00000454323 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CUL3-208ENST00000454323 NUDT18Q6ZVK8 323 aa12.36□□□□□ -0.43
CUL3-208ENST00000454323 TMUB1Q9BVT8 246 aa12.36□□□□□ -0.43
CUL3-208ENST00000454323 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
CUL3-208ENST00000454323 APLP1P51693 650 aa12.32□□□□□ -0.44
CUL3-208ENST00000454323 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
CUL3-208ENST00000454323 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
CUL3-208ENST00000454323 OSBPP22059 807 aa12.28□□□□□ -0.44
CUL3-208ENST00000454323 LCE2BO14633 110 aa12.27□□□□□ -0.45
CUL3-208ENST00000454323 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
CUL3-208ENST00000454323 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
CUL3-208ENST00000454323 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
CUL3-208ENST00000454323 ZNF787Q6DD87 383 aa12.26□□□□□ -0.45
CUL3-208ENST00000454323 TTC13Q8NBP0 860 aa12.25□□□□□ -0.45
CUL3-208ENST00000454323 CDHR5Q9HBB8 845 aa12.25□□□□□ -0.45
CUL3-208ENST00000454323 ZPR1O75312 459 aa12.24□□□□□ -0.45
CUL3-208ENST00000454323 COPS2P61201 443 aa12.24□□□□□ -0.45
CUL3-208ENST00000454323 C3orf80F5H4A9 247 aa12.23□□□□□ -0.45
CUL3-208ENST00000454323 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
CUL3-208ENST00000454323 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
CUL3-208ENST00000454323 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
CUL3-208ENST00000454323 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
CUL3-208ENST00000454323 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
CUL3-208ENST00000454323 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
CUL3-208ENST00000454323 SLC19A1P41440 591 aa12.16□□□□□ -0.46
CUL3-208ENST00000454323 PKDCCQ504Y2 493 aa12.16□□□□□ -0.46
CUL3-208ENST00000454323 DNAJB2P25686 324 aa12.15□□□□□ -0.46
CUL3-208ENST00000454323 EYA1Q99502 592 aa12.15□□□□□ -0.46
CUL3-208ENST00000454323 DGAT1O75907 488 aa12.14□□□□□ -0.47
CUL3-208ENST00000454323 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms