RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
HCG18-239ENST00000454129 AMPHP49418 695 aa8.3□□□□□ -1.08
HCG18-239ENST00000454129 SLC4A10Q6U841 1118 aa8.3□□□□□ -1.08
HCG18-239ENST00000454129 NAP1L5Q96NT1 182 aaPredicted RBP8.3□□□□□ -1.08
HCG18-239ENST00000454129 RRP7AQ9Y3A4 280 aaKnown RBP8.3□□□□□ -1.08
HCG18-239ENST00000454129 PTPRGP23470 1445 aa8.29□□□□□ -1.08
HCG18-239ENST00000454129 CENPJQ9HC77 1338 aaPredicted RBP8.29□□□□□ -1.08
HCG18-239ENST00000454129 CYB5RLQ6IPT4 315 aa8.29□□□□□ -1.08
HCG18-239ENST00000454129 PMFBP1Q8TBY8 1022 aa8.29□□□□□ -1.08
HCG18-239ENST00000454129 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
HCG18-239ENST00000454129 NRDCO43847 1150 aa8.29□□□□□ -1.08
HCG18-239ENST00000454129 CCDC144AA2RUR9 1427 aa8.29□□□□□ -1.08
HCG18-239ENST00000454129 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
HCG18-239ENST00000454129 PRKRIP1Q9H875 184 aaPredicted RBP8.28□□□□□ -1.08
HCG18-239ENST00000454129 ISY1Q9ULR0 285 aaKnown RBP8.28□□□□□ -1.08
HCG18-239ENST00000454129 VGFO15240 615 aaPredicted RBP8.28□□□□□ -1.08
HCG18-239ENST00000454129 HMMRO75330 724 aa8.28□□□□□ -1.08
HCG18-239ENST00000454129 MFAP1P55081 439 aaKnown RBP8.28□□□□□ -1.08
HCG18-239ENST00000454129 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
HCG18-239ENST00000454129 GOLGA6L6A8MZA4 724 aa8.27□□□□□ -1.09
HCG18-239ENST00000454129 LMOD3Q0VAK6 560 aa8.27□□□□□ -1.09
HCG18-239ENST00000454129 GORABQ5T7V8 394 aa8.27□□□□□ -1.09
HCG18-239ENST00000454129 MYBBP1AQ9BQG0 1328 aaKnown RBP8.27□□□□□ -1.09
HCG18-239ENST00000454129 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.09
HCG18-239ENST00000454129 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
HCG18-239ENST00000454129 KIF15Q9NS87 1388 aa8.26□□□□□ -1.09
HCG18-239ENST00000454129 BCL2L13Q9BXK5 485 aa8.26□□□□□ -1.09
HCG18-239ENST00000454129 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
HCG18-239ENST00000454129 HDAC5Q9UQL6 1122 aa8.26□□□□□ -1.09
HCG18-239ENST00000454129 GNL2Q13823 731 aaKnown RBP8.26□□□□□ -1.09
HCG18-239ENST00000454129 WDR97A6NE52 1622 aa8.26□□□□□ -1.09
HCG18-239ENST00000454129 IGF1RP08069 1367 aa8.26□□□□□ -1.09
HCG18-239ENST00000454129 L1TD1Q5T7N2 865 aaKnown RBP8.26□□□□□ -1.09
HCG18-239ENST00000454129 GBP4Q96PP9 640 aa8.26□□□□□ -1.09
HCG18-239ENST00000454129 RRBP1Q9P2E9 1410 aaKnown RBP8.25□□□□□ -1.09
HCG18-239ENST00000454129 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
HCG18-239ENST00000454129 TAF7LQ5H9L4 462 aa8.25□□□□□ -1.09
HCG18-239ENST00000454129 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
HCG18-239ENST00000454129 PLIN1O60240 522 aa8.25□□□□□ -1.09
HCG18-239ENST00000454129 ZNF644Q9H582 1327 aaPredicted RBP8.24□□□□□ -1.09
HCG18-239ENST00000454129 APAF1O14727 1248 aa8.24□□□□□ -1.09
HCG18-239ENST00000454129 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
HCG18-239ENST00000454129 EVC2Q86UK5 1308 aa8.24□□□□□ -1.09
HCG18-239ENST00000454129 USP47Q96K76 1375 aa8.24□□□□□ -1.09
HCG18-239ENST00000454129 CGNL1Q0VF96 1302 aa8.23□□□□□ -1.09
HCG18-239ENST00000454129 MSNP26038 577 aaKnown RBP8.23□□□□□ -1.09
HCG18-239ENST00000454129 COG3Q96JB2 828 aa8.23□□□□□ -1.09
HCG18-239ENST00000454129 OSCARQ8IYS5 282 aa8.23□□□□□ -1.09
HCG18-239ENST00000454129 BIVM-ERCC5R4GMW8 1640 aa8.22□□□□□ -1.09
HCG18-239ENST00000454129 CUX1P39880 1505 aa8.22□□□□□ -1.09
HCG18-239ENST00000454129 GPATCH3Q96I76 525 aa8.22□□□□□ -1.09
HCG18-239ENST00000454129 IPO9Q96P70 1041 aaKnown RBP8.22□□□□□ -1.09
HCG18-239ENST00000454129 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
HCG18-239ENST00000454129 CHAF1AQ13111 956 aaPredicted RBP8.21□□□□□ -1.09
HCG18-239ENST00000454129 NOL8Q76FK4 1167 aaKnown RBP8.21□□□□□ -1.09
HCG18-239ENST00000454129 ARAP1Q96P48 1450 aa8.21□□□□□ -1.09
HCG18-239ENST00000454129 EXOC6Q8TAG9 804 aa8.21□□□□□ -1.09
HCG18-239ENST00000454129 FOXD4L1Q9NU39 408 aa8.21□□□□□ -1.09
HCG18-239ENST00000454129 POLA1P09884 1462 aaPredicted RBP8.21□□□□□ -1.09
HCG18-239ENST00000454129 ZNF608Q9ULD9 1512 aaPredicted RBP8.21□□□□□ -1.1
HCG18-239ENST00000454129 E9PSI1 815 aa8.21□□□□□ -1.1
HCG18-239ENST00000454129 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
HCG18-239ENST00000454129 GTF2E1P29083 439 aaPredicted RBP8.21□□□□□ -1.1
HCG18-239ENST00000454129 UACAQ9BZF9 1416 aa8.21□□□□□ -1.1
HCG18-239ENST00000454129 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
HCG18-239ENST00000454129 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
HCG18-239ENST00000454129 TEFQ10587 303 aa8.2□□□□□ -1.1
HCG18-239ENST00000454129 MRC2Q9UBG0 1479 aa8.2□□□□□ -1.1
HCG18-239ENST00000454129 ANKRD45Q5TZF3 282 aa8.2□□□□□ -1.1
HCG18-239ENST00000454129 GAPVD1Q14C86 1478 aa8.2□□□□□ -1.1
HCG18-239ENST00000454129 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
HCG18-239ENST00000454129 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
HCG18-239ENST00000454129 MYOM3Q5VTT5 1437 aa8.19□□□□□ -1.1
HCG18-239ENST00000454129 RRP1P56182 461 aaKnown RBP8.19□□□□□ -1.1
HCG18-239ENST00000454129 CENPQQ7L2Z9 268 aaPredicted RBP8.19□□□□□ -1.1
HCG18-239ENST00000454129 CRBNQ96SW2 442 aa8.19□□□□□ -1.1
HCG18-239ENST00000454129 DIAPH1O60610 1272 aaKnown RBP8.18□□□□□ -1.1
HCG18-239ENST00000454129 CLSTN1O94985 981 aa8.18□□□□□ -1.1
HCG18-239ENST00000454129 TMX4Q9H1E5 349 aaPredicted RBP8.18□□□□□ -1.1
HCG18-239ENST00000454129 FRAT2O75474 233 aaPredicted RBP8.18□□□□□ -1.1
HCG18-239ENST00000454129 HSP90B1P14625 803 aaKnown RBP8.18□□□□□ -1.1
HCG18-239ENST00000454129 PTMSP20962 102 aa8.18□□□□□ -1.1
HCG18-239ENST00000454129 PDE4AP27815 886 aa8.18□□□□□ -1.1
HCG18-239ENST00000454129 SYAP1Q96A49 352 aaPredicted RBP8.18□□□□□ -1.1
HCG18-239ENST00000454129 C1orf141Q5JVX7 400 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 RILPL2Q969X0 211 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 TOMM22Q9NS69 142 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 EIF2S2P20042 333 aaKnown RBP8.17□□□□□ -1.1
HCG18-239ENST00000454129 KIAA2012Q0VF49 1180 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 TOP2BQ02880 1626 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 ST18O60284 1047 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 RIPK4P57078 832 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 FAM69CQ0P6D2 419 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 NGEFQ8N5V2 710 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
HCG18-239ENST00000454129 SLC4A3P48751 1232 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 FGD6Q6ZV73 1430 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 LAMC3Q9Y6N6 1575 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms