RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-226ENST00000453141 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
HDLBP-226ENST00000453141 MIA2Q96PC5 1412 aa11.82□□□□□ -0.52
HDLBP-226ENST00000453141 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
HDLBP-226ENST00000453141 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
HDLBP-226ENST00000453141 A2ML1A8K2U0 1454 aa11.8□□□□□ -0.52
HDLBP-226ENST00000453141 PZPP20742 1482 aa11.8□□□□□ -0.52
HDLBP-226ENST00000453141 LTBP4Q8N2S1 1624 aa11.79□□□□□ -0.52
HDLBP-226ENST00000453141 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
HDLBP-226ENST00000453141 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
HDLBP-226ENST00000453141 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
HDLBP-226ENST00000453141 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-226ENST00000453141 PKD2Q13563 968 aa11.78□□□□□ -0.52
HDLBP-226ENST00000453141 PHF23Q9BUL5 403 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-226ENST00000453141 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
HDLBP-226ENST00000453141 DNMT1P26358 1616 aaKnown RBP11.78□□□□□ -0.52
HDLBP-226ENST00000453141 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
HDLBP-226ENST00000453141 EIF2AK4Q9P2K8 1649 aaKnown RBP11.78□□□□□ -0.52
HDLBP-226ENST00000453141 TNRQ92752 1358 aa11.77□□□□□ -0.53
HDLBP-226ENST00000453141 IQSEC2Q5JU85 1478 aa11.76□□□□□ -0.53
HDLBP-226ENST00000453141 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
HDLBP-226ENST00000453141 APLP2Q06481 763 aa11.76□□□□□ -0.53
HDLBP-226ENST00000453141 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-226ENST00000453141 SHANK2Q9UPX8 1470 aa11.75□□□□□ -0.53
HDLBP-226ENST00000453141 ABCC3O15438 1527 aa11.75□□□□□ -0.53
HDLBP-226ENST00000453141 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
HDLBP-226ENST00000453141 PTPN23Q9H3S7 1636 aa11.75□□□□□ -0.53
HDLBP-226ENST00000453141 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
HDLBP-226ENST00000453141 NLRP1Q9C000 1473 aa11.74□□□□□ -0.53
HDLBP-226ENST00000453141 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
HDLBP-226ENST00000453141 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-226ENST00000453141 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-226ENST00000453141 UGGT1Q9NYU2 1555 aa11.72□□□□□ -0.53
HDLBP-226ENST00000453141 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
HDLBP-226ENST00000453141 KIF15Q9NS87 1388 aa11.72□□□□□ -0.53
HDLBP-226ENST00000453141 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
HDLBP-226ENST00000453141 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.53
HDLBP-226ENST00000453141 ABCC5O15440 1437 aa11.71□□□□□ -0.53
HDLBP-226ENST00000453141 ERBINQ96RT1 1412 aa11.71□□□□□ -0.53
HDLBP-226ENST00000453141 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-226ENST00000453141 DAPK1P53355 1430 aa11.7□□□□□ -0.54
HDLBP-226ENST00000453141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDLBP-226ENST00000453141 ERVK-7P63135 1459 aa11.7□□□□□ -0.54
HDLBP-226ENST00000453141 CEP152O94986 1710 aa11.69□□□□□ -0.54
HDLBP-226ENST00000453141 THEMISQ8N1K5 641 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-226ENST00000453141 RRP7BPQ9NSQ0 103 aa11.68□□□□□ -0.54
HDLBP-226ENST00000453141 DEPDC5O75140 1603 aa11.68□□□□□ -0.54
HDLBP-226ENST00000453141 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
HDLBP-226ENST00000453141 MED14O60244 1454 aa11.66□□□□□ -0.54
HDLBP-226ENST00000453141 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
HDLBP-226ENST00000453141 ANKRD30AQ9BXX3 1397 aa11.66□□□□□ -0.54
HDLBP-226ENST00000453141 CPS1P31327 1500 aa11.65□□□□□ -0.54
HDLBP-226ENST00000453141 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-226ENST00000453141 IQGAP1P46940 1657 aa11.64□□□□□ -0.55
HDLBP-226ENST00000453141 KANK1Q14678 1352 aa11.64□□□□□ -0.55
HDLBP-226ENST00000453141 UBR1Q8IWV7 1749 aa11.63□□□□□ -0.55
HDLBP-226ENST00000453141 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
HDLBP-226ENST00000453141 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
HDLBP-226ENST00000453141 HRCP23327 699 aa11.63□□□□□ -0.55
HDLBP-226ENST00000453141 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
HDLBP-226ENST00000453141 ADGRL2O95490 1459 aa11.63□□□□□ -0.55
HDLBP-226ENST00000453141 LMTK2Q8IWU2 1503 aa11.62□□□□□ -0.55
HDLBP-226ENST00000453141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.554e-10■■□□□ 14
HDLBP-226ENST00000453141 DISP3Q9P2K9 1392 aa11.61□□□□□ -0.55
HDLBP-226ENST00000453141 SCAF11Q99590 1463 aaKnown RBP11.6□□□□□ -0.55
HDLBP-226ENST00000453141 ARHGAP23Q9P227 1491 aa11.6□□□□□ -0.55
HDLBP-226ENST00000453141 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
HDLBP-226ENST00000453141 SLIT1O75093 1534 aa11.6□□□□□ -0.55
HDLBP-226ENST00000453141 EFCAB6Q5THR3 1501 aa11.6□□□□□ -0.55
HDLBP-226ENST00000453141 PIK3C2BO00750 1634 aa11.59□□□□□ -0.55
HDLBP-226ENST00000453141 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
HDLBP-226ENST00000453141 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
HDLBP-226ENST00000453141 SYNMO15061 1565 aa11.58□□□□□ -0.56
HDLBP-226ENST00000453141 KDM5AP29375 1690 aaKnown RBP11.57□□□□□ -0.56
HDLBP-226ENST00000453141 TOM1O60784 492 aa11.57□□□□□ -0.56
HDLBP-226ENST00000453141 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
HDLBP-226ENST00000453141 LTKP29376 864 aa11.56□□□□□ -0.56
HDLBP-226ENST00000453141 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
HDLBP-226ENST00000453141 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 NOS1P29475 1434 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 STRCP1A6NGW2 1772 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 TXNDC2Q86VQ3 553 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 EID1Q9Y6B2 187 aa11.55□□□□□ -0.56
HDLBP-226ENST00000453141 IDI1Q13907 227 aa11.54□□□□□ -0.56
HDLBP-226ENST00000453141 RPRD2Q5VT52 1461 aaKnown RBP11.54□□□□□ -0.56
HDLBP-226ENST00000453141 ADGRB3O60242 1522 aa11.54□□□□□ -0.56
HDLBP-226ENST00000453141 UNC13BO14795 1591 aa11.53□□□□□ -0.56
HDLBP-226ENST00000453141 ALKQ9UM73 1620 aa11.53□□□□□ -0.56
HDLBP-226ENST00000453141 TET3O43151 1660 aa11.52□□□□□ -0.56
HDLBP-226ENST00000453141 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
HDLBP-226ENST00000453141 HSPA1LP34931 641 aa11.51□□□□□ -0.57
HDLBP-226ENST00000453141 ILDR2Q71H61 639 aa11.51□□□□□ -0.57
HDLBP-226ENST00000453141 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
HDLBP-226ENST00000453141 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
HDLBP-226ENST00000453141 IQGAP3Q86VI3 1631 aa11.48□□□□□ -0.57
HDLBP-226ENST00000453141 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.57
HDLBP-226ENST00000453141 E9PCH4 1651 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 237 ms