RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
SCN3A-205ENST00000453007 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
SCN3A-205ENST00000453007 TK2O00142 265 aa12.59□□□□□ -0.39
SCN3A-205ENST00000453007 EPAS1Q99814 870 aa12.59□□□□□ -0.39
SCN3A-205ENST00000453007 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
SCN3A-205ENST00000453007 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
SCN3A-205ENST00000453007 NBR1Q14596 966 aa12.56□□□□□ -0.4
SCN3A-205ENST00000453007 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
SCN3A-205ENST00000453007 GRXCR2A6NFK2 248 aa12.54□□□□□ -0.4
SCN3A-205ENST00000453007 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
SCN3A-205ENST00000453007 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
SCN3A-205ENST00000453007 PPP1R3GB7ZBB8 358 aa12.51□□□□□ -0.41
SCN3A-205ENST00000453007 HRO43593 1189 aa12.51□□□□□ -0.41
SCN3A-205ENST00000453007 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
SCN3A-205ENST00000453007 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
SCN3A-205ENST00000453007 MAP3K7O43318 606 aa12.5□□□□□ -0.41
SCN3A-205ENST00000453007 C6orf132Q5T0Z8 1188 aa12.5□□□□□ -0.41
SCN3A-205ENST00000453007 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
SCN3A-205ENST00000453007 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
SCN3A-205ENST00000453007 COL9A1P20849 921 aa12.49□□□□□ -0.41
SCN3A-205ENST00000453007 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
SCN3A-205ENST00000453007 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
SCN3A-205ENST00000453007 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
SCN3A-205ENST00000453007 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
SCN3A-205ENST00000453007 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
SCN3A-205ENST00000453007 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
SCN3A-205ENST00000453007 MRPL50Q8N5N7 158 aaKnown RBP12.42□□□□□ -0.42
SCN3A-205ENST00000453007 KCTD12Q96CX2 325 aaKnown RBP12.41□□□□□ -0.42
SCN3A-205ENST00000453007 OSBPP22059 807 aa12.4□□□□□ -0.42
SCN3A-205ENST00000453007 BHMG1C9JSJ3 638 aaPredicted RBP12.39□□□□□ -0.43
SCN3A-205ENST00000453007 RABGEF1Q9UJ41 708 aa12.39□□□□□ -0.43
SCN3A-205ENST00000453007 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
SCN3A-205ENST00000453007 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
SCN3A-205ENST00000453007 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
SCN3A-205ENST00000453007 TRIM6-TRIM34B2RNG4 842 aa12.35□□□□□ -0.43
SCN3A-205ENST00000453007 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
SCN3A-205ENST00000453007 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
SCN3A-205ENST00000453007 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
SCN3A-205ENST00000453007 WNT2BQ93097 391 aa12.33□□□□□ -0.44
SCN3A-205ENST00000453007 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
SCN3A-205ENST00000453007 SEMA3EO15041 775 aa12.31□□□□□ -0.44
SCN3A-205ENST00000453007 PTPN5P54829 565 aa12.31□□□□□ -0.44
SCN3A-205ENST00000453007 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
SCN3A-205ENST00000453007 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
SCN3A-205ENST00000453007 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
SCN3A-205ENST00000453007 PRSS12P56730 875 aa12.29□□□□□ -0.44
SCN3A-205ENST00000453007 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
SCN3A-205ENST00000453007 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
SCN3A-205ENST00000453007 THSD4Q6ZMP0 1018 aa12.27□□□□□ -0.45
SCN3A-205ENST00000453007 ANKK1Q8NFD2 765 aa12.27□□□□□ -0.45
SCN3A-205ENST00000453007 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
SCN3A-205ENST00000453007 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
SCN3A-205ENST00000453007 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
SCN3A-205ENST00000453007 NBPF26B4DH59 902 aa12.22□□□□□ -0.45
SCN3A-205ENST00000453007 SMAPO00193 183 aa12.22□□□□□ -0.45
SCN3A-205ENST00000453007 SMYD5Q6GMV2 418 aa12.22□□□□□ -0.45
SCN3A-205ENST00000453007 FAM198AQ9UFP1 575 aa12.22□□□□□ -0.45
SCN3A-205ENST00000453007 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
SCN3A-205ENST00000453007 NPDC1Q9NQX5 325 aaPredicted RBP12.21□□□□□ -0.45
SCN3A-205ENST00000453007 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.45
SCN3A-205ENST00000453007 BCAMP50895 628 aa12.2□□□□□ -0.46
SCN3A-205ENST00000453007 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
SCN3A-205ENST00000453007 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
SCN3A-205ENST00000453007 TATDN2Q93075 761 aa12.19□□□□□ -0.46
SCN3A-205ENST00000453007 NUDT18Q6ZVK8 323 aa12.18□□□□□ -0.46
SCN3A-205ENST00000453007 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
SCN3A-205ENST00000453007 LRCH3Q96II8 777 aa12.17□□□□□ -0.46
SCN3A-205ENST00000453007 PLA2G2EQ9NZK7 142 aa12.17□□□□□ -0.46
SCN3A-205ENST00000453007 PTGDRQ13258 359 aa12.16□□□□□ -0.46
SCN3A-205ENST00000453007 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
SCN3A-205ENST00000453007 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
SCN3A-205ENST00000453007 RBM26Q5T8P6 1007 aaKnown RBP12.14□□□□□ -0.47
SCN3A-205ENST00000453007 FCHSD2O94868 740 aa12.13□□□□□ -0.47
SCN3A-205ENST00000453007 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
SCN3A-205ENST00000453007 TTC13Q8NBP0 860 aa12.12□□□□□ -0.47
SCN3A-205ENST00000453007 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
SCN3A-205ENST00000453007 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
SCN3A-205ENST00000453007 RNF40O75150 1001 aa12.09□□□□□ -0.47
SCN3A-205ENST00000453007 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
SCN3A-205ENST00000453007 TSR3Q9UJK0 312 aaKnown RBP12.09□□□□□ -0.47
SCN3A-205ENST00000453007 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
SCN3A-205ENST00000453007 PPP4CP60510 307 aa12.06□□□□□ -0.48
SCN3A-205ENST00000453007 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
SCN3A-205ENST00000453007 HIC1Q14526 733 aa12.04□□□□□ -0.48
SCN3A-205ENST00000453007 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
SCN3A-205ENST00000453007 FAM161AQ3B820 660 aa12.03□□□□□ -0.48
SCN3A-205ENST00000453007 SWT1Q5T5J6 900 aaKnown RBP12.03□□□□□ -0.48
SCN3A-205ENST00000453007 EYA1Q99502 592 aa12.03□□□□□ -0.48
SCN3A-205ENST00000453007 SLC4A3P48751 1232 aa12.02□□□□□ -0.49
SCN3A-205ENST00000453007 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
SCN3A-205ENST00000453007 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
SCN3A-205ENST00000453007 GNPATO15228 680 aa11.99□□□□□ -0.49
SCN3A-205ENST00000453007 SLF2Q8IX21 1173 aa11.99□□□□□ -0.49
SCN3A-205ENST00000453007 DNAJB2P25686 324 aa11.98□□□□□ -0.49
SCN3A-205ENST00000453007 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
SCN3A-205ENST00000453007 RCCD1A6NED2 376 aa11.95□□□□□ -0.5
SCN3A-205ENST00000453007 GPR37O15354 613 aa11.95□□□□□ -0.5
SCN3A-205ENST00000453007 OATP04181 439 aa11.95□□□□□ -0.5
SCN3A-205ENST00000453007 FECHP22830 423 aa11.95□□□□□ -0.5
SCN3A-205ENST00000453007 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms