RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 CREBRFQ8IUR6 639 aa18■□□□□ 0.47
SMARCA2-214ENST00000450198 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
SMARCA2-214ENST00000450198 CEP162Q5TB80 1403 aa18■□□□□ 0.47
SMARCA2-214ENST00000450198 TPM3P06753 285 aa18■□□□□ 0.47
SMARCA2-214ENST00000450198 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
SMARCA2-214ENST00000450198 PSME1Q06323 249 aa17.99■□□□□ 0.47
SMARCA2-214ENST00000450198 TPM2P07951 284 aa17.99■□□□□ 0.47
SMARCA2-214ENST00000450198 NUP155O75694 1391 aa17.98■□□□□ 0.47
SMARCA2-214ENST00000450198 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
SMARCA2-214ENST00000450198 MSNP26038 577 aaKnown RBP17.98■□□□□ 0.47
SMARCA2-214ENST00000450198 PPP4R2Q9NY27 417 aa17.98■□□□□ 0.47
SMARCA2-214ENST00000450198 R3HCC1Q9Y3T6 440 aaKnown RBP17.97■□□□□ 0.47
SMARCA2-214ENST00000450198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMARCA2-214ENST00000450198 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
SMARCA2-214ENST00000450198 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
SMARCA2-214ENST00000450198 COG3Q96JB2 828 aa17.97■□□□□ 0.47
SMARCA2-214ENST00000450198 SF3A1Q15459 793 aaKnown RBP17.96■□□□□ 0.47
SMARCA2-214ENST00000450198 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.47
SMARCA2-214ENST00000450198 CPLX2Q6PUV4 134 aaKnown RBP17.95■□□□□ 0.46
SMARCA2-214ENST00000450198 TSR1Q2NL82 804 aaKnown RBP17.95■□□□□ 0.46
SMARCA2-214ENST00000450198 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
SMARCA2-214ENST00000450198 CCDC47Q96A33 483 aaKnown RBP17.95■□□□□ 0.46
SMARCA2-214ENST00000450198 TPD52L1Q16890 204 aaPredicted RBP17.94■□□□□ 0.46
SMARCA2-214ENST00000450198 NAP1L5Q96NT1 182 aaPredicted RBP17.94■□□□□ 0.46
SMARCA2-214ENST00000450198 MIER1Q8N108 512 aa17.94■□□□□ 0.46
SMARCA2-214ENST00000450198 VGFO15240 615 aaPredicted RBP17.93■□□□□ 0.46
SMARCA2-214ENST00000450198 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
SMARCA2-214ENST00000450198 TIMELESSQ9UNS1 1208 aa17.93■□□□□ 0.46
SMARCA2-214ENST00000450198 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
SMARCA2-214ENST00000450198 HMGB2P26583 209 aaKnown RBP17.92■□□□□ 0.46
SMARCA2-214ENST00000450198 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
SMARCA2-214ENST00000450198 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
SMARCA2-214ENST00000450198 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
SMARCA2-214ENST00000450198 GOLGA6L1Q8N7Z2 621 aa17.91■□□□□ 0.46
SMARCA2-214ENST00000450198 WWC2Q6AWC2 1192 aa17.91■□□□□ 0.46
SMARCA2-214ENST00000450198 PES1O00541 588 aaKnown RBP17.91■□□□□ 0.46
SMARCA2-214ENST00000450198 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
SMARCA2-214ENST00000450198 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
SMARCA2-214ENST00000450198 RALBP1Q15311 655 aa17.9■□□□□ 0.46
SMARCA2-214ENST00000450198 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
SMARCA2-214ENST00000450198 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.45
SMARCA2-214ENST00000450198 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
SMARCA2-214ENST00000450198 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.45
SMARCA2-214ENST00000450198 UACAQ9BZF9 1416 aa17.89■□□□□ 0.45
SMARCA2-214ENST00000450198 SOGA1O94964 1423 aa17.88■□□□□ 0.45
SMARCA2-214ENST00000450198 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
SMARCA2-214ENST00000450198 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
SMARCA2-214ENST00000450198 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
SMARCA2-214ENST00000450198 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
SMARCA2-214ENST00000450198 TRIM29Q14134 588 aa17.86■□□□□ 0.45
SMARCA2-214ENST00000450198 TPM1P09493 284 aa17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 H3BQV1 296 aa17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 FAM184AQ8NB25 1140 aa17.85■□□□□ 0.45
SMARCA2-214ENST00000450198 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
SMARCA2-214ENST00000450198 SPRYD3Q8NCJ5 442 aa17.84■□□□□ 0.45
SMARCA2-214ENST00000450198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.84■□□□□ 0.456e-6■■■■■ 56.9
SMARCA2-214ENST00000450198 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.45
SMARCA2-214ENST00000450198 APPP05067 770 aa17.83■□□□□ 0.45
SMARCA2-214ENST00000450198 FMN1Q68DA7 1419 aa17.83■□□□□ 0.44
SMARCA2-214ENST00000450198 ERICH2A1L162 156 aa17.83■□□□□ 0.44
SMARCA2-214ENST00000450198 TRDNQ13061 729 aa17.82■□□□□ 0.44
SMARCA2-214ENST00000450198 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
SMARCA2-214ENST00000450198 PAF1Q8N7H5 531 aa17.82■□□□□ 0.44
SMARCA2-214ENST00000450198 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
SMARCA2-214ENST00000450198 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
SMARCA2-214ENST00000450198 ST18O60284 1047 aa17.78■□□□□ 0.44
SMARCA2-214ENST00000450198 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
SMARCA2-214ENST00000450198 ANKRD20A12PQ8NF67 263 aa17.78■□□□□ 0.44
SMARCA2-214ENST00000450198 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
SMARCA2-214ENST00000450198 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
SMARCA2-214ENST00000450198 HSPA5P11021 654 aaKnown RBP17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 CCDC70Q6NSX1 233 aa17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 IKQ13123 557 aaPredicted RBP17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 TMEM132AQ24JP5 1023 aa17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 NLRP2Q9NX02 1062 aa17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 PHF14O94880 888 aa17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 IPO7O95373 1038 aaKnown RBP17.76■□□□□ 0.43
SMARCA2-214ENST00000450198 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
SMARCA2-214ENST00000450198 ODF2Q5BJF6 829 aa17.75■□□□□ 0.43
SMARCA2-214ENST00000450198 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
SMARCA2-214ENST00000450198 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
SMARCA2-214ENST00000450198 CPLX1O14810 134 aa17.75■□□□□ 0.43
SMARCA2-214ENST00000450198 CGNL1Q0VF96 1302 aa17.75■□□□□ 0.43
SMARCA2-214ENST00000450198 PCMTD1Q96MG8 357 aaPredicted RBP17.74■□□□□ 0.43
SMARCA2-214ENST00000450198 CENPJQ9HC77 1338 aaPredicted RBP17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 IFIT2P09913 472 aaKnown RBP17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 CT47A1Q5JQC4 288 aaPredicted RBP17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 HOOK1Q9UJC3 728 aaKnown RBP17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 NOL8Q76FK4 1167 aaKnown RBP17.73■□□□□ 0.43
SMARCA2-214ENST00000450198 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
SMARCA2-214ENST00000450198 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms