RNA–Protein interactions for RNA: ENST00000449491.1

USP25-205, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 5

Gene USP25, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-205ENST00000449491 DDX12PQ92771 950 aa11.16□□□□□ -0.62
USP25-205ENST00000449491 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
USP25-205ENST00000449491 C6orf132Q5T0Z8 1188 aa11.15□□□□□ -0.62
USP25-205ENST00000449491 EPAS1Q99814 870 aa11.14□□□□□ -0.63
USP25-205ENST00000449491 E2F4Q16254 413 aa11.13□□□□□ -0.63
USP25-205ENST00000449491 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
USP25-205ENST00000449491 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
USP25-205ENST00000449491 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
USP25-205ENST00000449491 THSD4Q6ZMP0 1018 aa11.11□□□□□ -0.63
USP25-205ENST00000449491 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
USP25-205ENST00000449491 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
USP25-205ENST00000449491 RABGEF1Q9UJ41 708 aa11.11□□□□□ -0.63
USP25-205ENST00000449491 PTPN5P54829 565 aa11.09□□□□□ -0.63
USP25-205ENST00000449491 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
USP25-205ENST00000449491 WNT2BQ93097 391 aa11.08□□□□□ -0.64
USP25-205ENST00000449491 NBPF3Q9H094 633 aa11.08□□□□□ -0.64
USP25-205ENST00000449491 EN1Q05925 392 aaPredicted RBP11.07□□□□□ -0.64
USP25-205ENST00000449491 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
USP25-205ENST00000449491 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
USP25-205ENST00000449491 KIAA1468Q9P260 1216 aa11.07□□□□□ -0.64
USP25-205ENST00000449491 NBR1Q14596 966 aa11.06□□□□□ -0.64
USP25-205ENST00000449491 ONECUT3O60422 494 aaPredicted RBP11.05□□□□□ -0.64
USP25-205ENST00000449491 WDR70Q9NW82 654 aa11.05□□□□□ -0.64
USP25-205ENST00000449491 GOLGA8CPA6NN73 597 aa11.03□□□□□ -0.64
USP25-205ENST00000449491 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
USP25-205ENST00000449491 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
USP25-205ENST00000449491 MAP3K7O43318 606 aa11□□□□□ -0.65
USP25-205ENST00000449491 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
USP25-205ENST00000449491 SEPT9Q9UHD8 586 aaPredicted RBP11□□□□□ -0.65
USP25-205ENST00000449491 GRXCR2A6NFK2 248 aa10.99□□□□□ -0.65
USP25-205ENST00000449491 OSBPP22059 807 aa10.99□□□□□ -0.65
USP25-205ENST00000449491 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
USP25-205ENST00000449491 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
USP25-205ENST00000449491 BCAMP50895 628 aa10.98□□□□□ -0.65
USP25-205ENST00000449491 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
USP25-205ENST00000449491 SOWAHBA6NEL2 793 aa10.96□□□□□ -0.65
USP25-205ENST00000449491 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
USP25-205ENST00000449491 CDHR5Q9HBB8 845 aa10.95□□□□□ -0.66
USP25-205ENST00000449491 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
USP25-205ENST00000449491 FAM98CQ17RN3 349 aaKnown RBP10.93□□□□□ -0.66
USP25-205ENST00000449491 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
USP25-205ENST00000449491 PRSS12P56730 875 aa10.92□□□□□ -0.66
USP25-205ENST00000449491 KCNV2Q8TDN2 545 aa10.91□□□□□ -0.66
USP25-205ENST00000449491 WBP1LQ9NX94 342 aa10.91□□□□□ -0.66
USP25-205ENST00000449491 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
USP25-205ENST00000449491 SMAPO00193 183 aa10.89□□□□□ -0.67
USP25-205ENST00000449491 PACS2Q86VP3 889 aa10.89□□□□□ -0.67
USP25-205ENST00000449491 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
USP25-205ENST00000449491 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
USP25-205ENST00000449491 CERKQ8TCT0 537 aa10.87□□□□□ -0.67
USP25-205ENST00000449491 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
USP25-205ENST00000449491 TTC13Q8NBP0 860 aa10.86□□□□□ -0.67
USP25-205ENST00000449491 TATDN2Q93075 761 aa10.85□□□□□ -0.67
USP25-205ENST00000449491 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.85□□□□□ -0.67
USP25-205ENST00000449491 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
USP25-205ENST00000449491 A0A0G2JS52 829 aa10.83□□□□□ -0.68
USP25-205ENST00000449491 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
USP25-205ENST00000449491 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
USP25-205ENST00000449491 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
USP25-205ENST00000449491 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
USP25-205ENST00000449491 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
USP25-205ENST00000449491 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
USP25-205ENST00000449491 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
USP25-205ENST00000449491 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
USP25-205ENST00000449491 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
USP25-205ENST00000449491 PLCB2Q00722 1185 aa10.77□□□□□ -0.69
USP25-205ENST00000449491 EYA1Q99502 592 aa10.75□□□□□ -0.69
USP25-205ENST00000449491 RGS20O76081 388 aa10.74□□□□□ -0.69
USP25-205ENST00000449491 PPP4CP60510 307 aa10.74□□□□□ -0.69
USP25-205ENST00000449491 PTGDRQ13258 359 aa10.74□□□□□ -0.69
USP25-205ENST00000449491 SEMA3EO15041 775 aa10.73□□□□□ -0.69
USP25-205ENST00000449491 KCNC4Q03721 635 aa10.72□□□□□ -0.69
USP25-205ENST00000449491 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
USP25-205ENST00000449491 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
USP25-205ENST00000449491 APLP1P51693 650 aa10.68□□□□□ -0.7
USP25-205ENST00000449491 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
USP25-205ENST00000449491 MTRQ99707 1265 aa10.65□□□□□ -0.7
USP25-205ENST00000449491 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
USP25-205ENST00000449491 NUTM2FA1L443 756 aa10.64□□□□□ -0.71
USP25-205ENST00000449491 FAM161AQ3B820 660 aa10.64□□□□□ -0.71
USP25-205ENST00000449491 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
USP25-205ENST00000449491 TESPA1A2RU30 521 aaPredicted RBP10.63□□□□□ -0.71
USP25-205ENST00000449491 RNF40O75150 1001 aa10.63□□□□□ -0.71
USP25-205ENST00000449491 HDGFP51858 240 aaKnown RBP10.62□□□□□ -0.71
USP25-205ENST00000449491 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
USP25-205ENST00000449491 SLF2Q8IX21 1173 aa10.6□□□□□ -0.71
USP25-205ENST00000449491 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
USP25-205ENST00000449491 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
USP25-205ENST00000449491 FCHSD2O94868 740 aa10.58□□□□□ -0.72
USP25-205ENST00000449491 HAP1P54257 671 aaPredicted RBP10.58□□□□□ -0.72
USP25-205ENST00000449491 NKX2-3Q8TAU0 364 aa10.58□□□□□ -0.72
USP25-205ENST00000449491 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
USP25-205ENST00000449491 RCCD1A6NED2 376 aa10.57□□□□□ -0.72
USP25-205ENST00000449491 GPR37O15354 613 aa10.57□□□□□ -0.72
USP25-205ENST00000449491 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
USP25-205ENST00000449491 DNAJB2P25686 324 aa10.56□□□□□ -0.72
USP25-205ENST00000449491 RBM46Q8TBY0 533 aaKnown RBP10.56□□□□□ -0.72
USP25-205ENST00000449491 FECHP22830 423 aa10.55□□□□□ -0.72
USP25-205ENST00000449491 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
USP25-205ENST00000449491 COPS2P61201 443 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms