RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 TSPY4P0CV99 314 aa18.96■□□□□ 0.63
HLA-DRB9-201ENST00000449413 TSPY10P0CW01 314 aa18.96■□□□□ 0.63
HLA-DRB9-201ENST00000449413 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
HLA-DRB9-201ENST00000449413 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
HLA-DRB9-201ENST00000449413 EIF2AK4Q9P2K8 1649 aaKnown RBP18.95■□□□□ 0.62
HLA-DRB9-201ENST00000449413 UNC13BO14795 1591 aa18.94■□□□□ 0.62
HLA-DRB9-201ENST00000449413 UHRF1BP1Q6BDS2 1440 aa18.92■□□□□ 0.62
HLA-DRB9-201ENST00000449413 ANKRD50Q9ULJ7 1429 aa18.92■□□□□ 0.62
HLA-DRB9-201ENST00000449413 ATP10AO60312 1499 aa18.92■□□□□ 0.62
HLA-DRB9-201ENST00000449413 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
HLA-DRB9-201ENST00000449413 DIP2CQ9Y2E4 1556 aa18.92■□□□□ 0.62
HLA-DRB9-201ENST00000449413 PTPRTO14522 1441 aa18.91■□□□□ 0.62
HLA-DRB9-201ENST00000449413 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
HLA-DRB9-201ENST00000449413 CEBPAP49715 358 aaPredicted RBP18.91■□□□□ 0.62
HLA-DRB9-201ENST00000449413 SPAG9O60271 1321 aaKnown RBP18.91■□□□□ 0.62
HLA-DRB9-201ENST00000449413 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
HLA-DRB9-201ENST00000449413 DEPDC5O75140 1603 aa18.9■□□□□ 0.62
HLA-DRB9-201ENST00000449413 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
HLA-DRB9-201ENST00000449413 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
HLA-DRB9-201ENST00000449413 HRCP23327 699 aa18.89■□□□□ 0.61
HLA-DRB9-201ENST00000449413 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
HLA-DRB9-201ENST00000449413 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
HLA-DRB9-201ENST00000449413 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
HLA-DRB9-201ENST00000449413 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
HLA-DRB9-201ENST00000449413 SETD1BQ9UPS6 1966 aaKnown RBP18.83■□□□□ 0.61
HLA-DRB9-201ENST00000449413 LTBP4Q8N2S1 1624 aa18.83■□□□□ 0.61
HLA-DRB9-201ENST00000449413 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.6
HLA-DRB9-201ENST00000449413 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
HLA-DRB9-201ENST00000449413 REREQ9P2R6 1566 aa18.82■□□□□ 0.6
HLA-DRB9-201ENST00000449413 PRDM15P57071 1507 aaPredicted RBP18.82■□□□□ 0.6
HLA-DRB9-201ENST00000449413 MROH1Q8NDA8 1641 aa18.82■□□□□ 0.6
HLA-DRB9-201ENST00000449413 A2MP01023 1474 aa18.81■□□□□ 0.6
HLA-DRB9-201ENST00000449413 PZPP20742 1482 aa18.81■□□□□ 0.6
HLA-DRB9-201ENST00000449413 FAM135AQ9P2D6 1515 aa18.78■□□□□ 0.6
HLA-DRB9-201ENST00000449413 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
HLA-DRB9-201ENST00000449413 DHX29Q7Z478 1369 aaKnown RBP18.76■□□□□ 0.59
HLA-DRB9-201ENST00000449413 VWDEQ8N2E2 1590 aa18.76■□□□□ 0.59
HLA-DRB9-201ENST00000449413 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
HLA-DRB9-201ENST00000449413 CEP152O94986 1710 aa18.74■□□□□ 0.59
HLA-DRB9-201ENST00000449413 TET3O43151 1660 aa18.74■□□□□ 0.59
HLA-DRB9-201ENST00000449413 ZC3H13Q5T200 1668 aaKnown RBP18.73■□□□□ 0.59
HLA-DRB9-201ENST00000449413 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
HLA-DRB9-201ENST00000449413 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
HLA-DRB9-201ENST00000449413 AGLP35573 1532 aa18.69■□□□□ 0.58
HLA-DRB9-201ENST00000449413 NUP155O75694 1391 aa18.69■□□□□ 0.58
HLA-DRB9-201ENST00000449413 E9PCH4 1651 aa18.69■□□□□ 0.58
HLA-DRB9-201ENST00000449413 C3P01024 1663 aa18.69■□□□□ 0.58
HLA-DRB9-201ENST00000449413 UBAP1LF5GYI3 381 aa18.68■□□□□ 0.58
HLA-DRB9-201ENST00000449413 CNTLNQ9NXG0 1405 aa18.67■□□□□ 0.58
HLA-DRB9-201ENST00000449413 CAMSAP1Q5T5Y3 1602 aa18.67■□□□□ 0.58
HLA-DRB9-201ENST00000449413 EFCAB6Q5THR3 1501 aa18.66■□□□□ 0.58
HLA-DRB9-201ENST00000449413 LMTK2Q8IWU2 1503 aa18.66■□□□□ 0.58
HLA-DRB9-201ENST00000449413 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
HLA-DRB9-201ENST00000449413 ZEB1P37275 1124 aaPredicted RBP18.65■□□□□ 0.58
HLA-DRB9-201ENST00000449413 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
HLA-DRB9-201ENST00000449413 NPATQ14207 1427 aa18.64■□□□□ 0.57
HLA-DRB9-201ENST00000449413 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
HLA-DRB9-201ENST00000449413 ZNF335Q9H4Z2 1342 aaPredicted RBP18.63■□□□□ 0.57
HLA-DRB9-201ENST00000449413 KANK1Q14678 1352 aa18.63■□□□□ 0.57
HLA-DRB9-201ENST00000449413 ABCC3O15438 1527 aa18.63■□□□□ 0.57
HLA-DRB9-201ENST00000449413 KIF3BO15066 747 aa18.61■□□□□ 0.57
HLA-DRB9-201ENST00000449413 PKD2Q13563 968 aa18.59■□□□□ 0.57
HLA-DRB9-201ENST00000449413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
HLA-DRB9-201ENST00000449413 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
HLA-DRB9-201ENST00000449413 CLTCQ00610 1675 aaKnown RBP18.57■□□□□ 0.56
HLA-DRB9-201ENST00000449413 TRPM2O94759 1503 aa18.57■□□□□ 0.56
HLA-DRB9-201ENST00000449413 PLA2R1Q13018 1463 aa18.57■□□□□ 0.56
HLA-DRB9-201ENST00000449413 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
HLA-DRB9-201ENST00000449413 RPRD2Q5VT52 1461 aaKnown RBP18.55■□□□□ 0.56
HLA-DRB9-201ENST00000449413 ZMYM3Q14202 1370 aa18.55■□□□□ 0.56
HLA-DRB9-201ENST00000449413 FOXD1Q16676 465 aa18.54■□□□□ 0.56
HLA-DRB9-201ENST00000449413 MED1Q15648 1581 aaPredicted RBP18.54■□□□□ 0.56
HLA-DRB9-201ENST00000449413 HSPA1LP34931 641 aa18.52■□□□□ 0.56
HLA-DRB9-201ENST00000449413 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
HLA-DRB9-201ENST00000449413 CLTCL1P53675 1640 aa18.52■□□□□ 0.55
HLA-DRB9-201ENST00000449413 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
HLA-DRB9-201ENST00000449413 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
HLA-DRB9-201ENST00000449413 GGT6Q6P531 493 aa18.48■□□□□ 0.55
HLA-DRB9-201ENST00000449413 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
HLA-DRB9-201ENST00000449413 TOM1O60784 492 aa18.47■□□□□ 0.55
HLA-DRB9-201ENST00000449413 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
HLA-DRB9-201ENST00000449413 ARHGAP31Q2M1Z3 1444 aa18.47■□□□□ 0.55
HLA-DRB9-201ENST00000449413 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
HLA-DRB9-201ENST00000449413 TONSLQ96HA7 1378 aa18.46■□□□□ 0.55
HLA-DRB9-201ENST00000449413 KIF1BO60333 1816 aa18.46■□□□□ 0.55
HLA-DRB9-201ENST00000449413 SYNMO15061 1565 aa18.46■□□□□ 0.55
HLA-DRB9-201ENST00000449413 CEP170BQ9Y4F5 1589 aaPredicted RBP18.46■□□□□ 0.55
HLA-DRB9-201ENST00000449413 PIK3C2BO00750 1634 aa18.45■□□□□ 0.54
HLA-DRB9-201ENST00000449413 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
HLA-DRB9-201ENST00000449413 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
HLA-DRB9-201ENST00000449413 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
HLA-DRB9-201ENST00000449413 WASHC2CQ9Y4E1 1318 aa18.44■□□□□ 0.54
HLA-DRB9-201ENST00000449413 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
HLA-DRB9-201ENST00000449413 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
HLA-DRB9-201ENST00000449413 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
HLA-DRB9-201ENST00000449413 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
HLA-DRB9-201ENST00000449413 CPS1P31327 1500 aa18.42■□□□□ 0.54
HLA-DRB9-201ENST00000449413 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
HLA-DRB9-201ENST00000449413 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
HLA-DRB9-201ENST00000449413 NOS1P29475 1434 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms