RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CLTCQ00610 1675 aaKnown RBP21.77■■□□□ 1.08
RTFDC1-204ENST00000449062 PREX1Q8TCU6 1659 aa21.77■■□□□ 1.08
RTFDC1-204ENST00000449062 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
RTFDC1-204ENST00000449062 FAM50AQ14320 339 aaKnown RBP21.76■■□□□ 1.07
RTFDC1-204ENST00000449062 NCOA1Q15788 1441 aa21.76■■□□□ 1.07
RTFDC1-204ENST00000449062 FBXO31Q5XUX0 539 aaPredicted RBP21.76■■□□□ 1.07
RTFDC1-204ENST00000449062 DUOX2Q9NRD8 1548 aa21.75■■□□□ 1.07
RTFDC1-204ENST00000449062 FAM135AQ9P2D6 1515 aa21.74■■□□□ 1.07
RTFDC1-204ENST00000449062 ANKRD30AQ9BXX3 1397 aa21.73■■□□□ 1.07
RTFDC1-204ENST00000449062 RNF17Q9BXT8 1623 aaKnown RBP21.71■■□□□ 1.07
RTFDC1-204ENST00000449062 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
RTFDC1-204ENST00000449062 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.07
RTFDC1-204ENST00000449062 ERBINQ96RT1 1412 aa21.7■■□□□ 1.06
RTFDC1-204ENST00000449062 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
RTFDC1-204ENST00000449062 PZPP20742 1482 aa21.69■■□□□ 1.06
RTFDC1-204ENST00000449062 MROH1Q8NDA8 1641 aa21.69■■□□□ 1.06
RTFDC1-204ENST00000449062 EIF2AK4Q9P2K8 1649 aaKnown RBP21.69■■□□□ 1.06
RTFDC1-204ENST00000449062 ABCC3O15438 1527 aa21.66■■□□□ 1.06
RTFDC1-204ENST00000449062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.66■■□□□ 1.06
RTFDC1-204ENST00000449062 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
RTFDC1-204ENST00000449062 STRCQ7RTU9 1775 aa21.64■■□□□ 1.06
RTFDC1-204ENST00000449062 TNRQ92752 1358 aa21.64■■□□□ 1.06
RTFDC1-204ENST00000449062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.052e-8■■■□□ 14.7
RTFDC1-204ENST00000449062 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
RTFDC1-204ENST00000449062 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
RTFDC1-204ENST00000449062 PTPRTO14522 1441 aa21.59■■□□□ 1.05
RTFDC1-204ENST00000449062 ARHGAP31Q2M1Z3 1444 aa21.59■■□□□ 1.05
RTFDC1-204ENST00000449062 ILDR1Q86SU0 546 aaPredicted RBP21.59■■□□□ 1.05
RTFDC1-204ENST00000449062 PRDM15P57071 1507 aaPredicted RBP21.59■■□□□ 1.05
RTFDC1-204ENST00000449062 ANKRD50Q9ULJ7 1429 aa21.58■■□□□ 1.05
RTFDC1-204ENST00000449062 NCKAP5LQ9HCH0 1330 aa21.57■■□□□ 1.04
RTFDC1-204ENST00000449062 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
RTFDC1-204ENST00000449062 CAMSAP1Q5T5Y3 1602 aa21.57■■□□□ 1.04
RTFDC1-204ENST00000449062 MYO3AQ8NEV4 1616 aa21.57■■□□□ 1.04
RTFDC1-204ENST00000449062 DEPDC5O75140 1603 aa21.56■■□□□ 1.04
RTFDC1-204ENST00000449062 VWDEQ8N2E2 1590 aa21.56■■□□□ 1.04
RTFDC1-204ENST00000449062 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
RTFDC1-204ENST00000449062 PKD2Q13563 968 aa21.55■■□□□ 1.04
RTFDC1-204ENST00000449062 PLA2R1Q13018 1463 aa21.55■■□□□ 1.04
RTFDC1-204ENST00000449062 ZNF142P52746 1687 aaPredicted RBP21.55■■□□□ 1.04
RTFDC1-204ENST00000449062 ZC3H13Q5T200 1668 aaKnown RBP21.55■■□□□ 1.04
RTFDC1-204ENST00000449062 SPATA31D1Q6ZQQ2 1576 aa21.54■■□□□ 1.04
RTFDC1-204ENST00000449062 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
RTFDC1-204ENST00000449062 NLRP1Q9C000 1473 aa21.53■■□□□ 1.04
RTFDC1-204ENST00000449062 KANK1Q14678 1352 aa21.53■■□□□ 1.04
RTFDC1-204ENST00000449062 LMTK2Q8IWU2 1503 aa21.53■■□□□ 1.04
RTFDC1-204ENST00000449062 ITGAEP38570 1179 aa21.52■■□□□ 1.04
RTFDC1-204ENST00000449062 THEMISQ8N1K5 641 aaPredicted RBP21.52■■□□□ 1.04
RTFDC1-204ENST00000449062 CEP152O94986 1710 aa21.5■■□□□ 1.03
RTFDC1-204ENST00000449062 CERKQ8TCT0 537 aa21.5■■□□□ 1.03
RTFDC1-204ENST00000449062 FBXO41Q8TF61 875 aa21.47■■□□□ 1.03
RTFDC1-204ENST00000449062 CFAP65Q6ZU64 1925 aaKnown RBP21.45■■□□□ 1.02
RTFDC1-204ENST00000449062 ANKLE2Q86XL3 938 aa21.45■■□□□ 1.02
RTFDC1-204ENST00000449062 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
RTFDC1-204ENST00000449062 IDI1Q13907 227 aa21.44■■□□□ 1.02
RTFDC1-204ENST00000449062 NOS1P29475 1434 aa21.44■■□□□ 1.02
RTFDC1-204ENST00000449062 LTBP4Q8N2S1 1624 aa21.4■■□□□ 1.02
RTFDC1-204ENST00000449062 EFCAB6Q5THR3 1501 aa21.39■■□□□ 1.02
RTFDC1-204ENST00000449062 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
RTFDC1-204ENST00000449062 UNC13BO14795 1591 aa21.38■■□□□ 1.01
RTFDC1-204ENST00000449062 MED14O60244 1454 aa21.38■■□□□ 1.01
RTFDC1-204ENST00000449062 NUP155O75694 1391 aa21.37■■□□□ 1.01
RTFDC1-204ENST00000449062 NEURL4Q96JN8 1562 aa21.37■■□□□ 1.01
RTFDC1-204ENST00000449062 LTKP29376 864 aa21.37■■□□□ 1.01
RTFDC1-204ENST00000449062 SLC52A1Q9NWF4 448 aa21.37■■□□□ 1.01
RTFDC1-204ENST00000449062 RPRD2Q5VT52 1461 aaKnown RBP21.37■■□□□ 1.01
RTFDC1-204ENST00000449062 NAIPQ13075 1403 aa21.37■■□□□ 1.01
RTFDC1-204ENST00000449062 ARHGAP23Q9P227 1491 aa21.35■■□□□ 1.01
RTFDC1-204ENST00000449062 SYNMO15061 1565 aa21.35■■□□□ 1.01
RTFDC1-204ENST00000449062 UBR1Q8IWV7 1749 aa21.32■■□□□ 1
RTFDC1-204ENST00000449062 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
RTFDC1-204ENST00000449062 TET3O43151 1660 aa21.32■■□□□ 1
RTFDC1-204ENST00000449062 TXNDC2Q86VQ3 553 aa21.32■■□□□ 1
RTFDC1-204ENST00000449062 SLIT1O75093 1534 aa21.32■■□□□ 1
RTFDC1-204ENST00000449062 TMEM2Q9UHN6 1383 aa21.31■■□□□ 1
RTFDC1-204ENST00000449062 HFM1A2PYH4 1435 aa21.29■■□□□ 1
RTFDC1-204ENST00000449062 PIK3C2BO00750 1634 aa21.29■■□□□ 1
RTFDC1-204ENST00000449062 IQGAP3Q86VI3 1631 aa21.29■■□□□ 1
RTFDC1-204ENST00000449062 STAG3Q9UJ98 1225 aa21.27■■□□□ 1
RTFDC1-204ENST00000449062 POLR1AO95602 1720 aaPredicted RBP21.26■□□□□ 0.99
RTFDC1-204ENST00000449062 SCAF11Q99590 1463 aaKnown RBP21.26■□□□□ 0.99
RTFDC1-204ENST00000449062 GCC2Q8IWJ2 1684 aa21.25■□□□□ 0.99
RTFDC1-204ENST00000449062 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
RTFDC1-204ENST00000449062 E9PCH4 1651 aa21.24■□□□□ 0.99
RTFDC1-204ENST00000449062 IQSEC2Q5JU85 1478 aa21.24■□□□□ 0.99
RTFDC1-204ENST00000449062 KDM5AP29375 1690 aaKnown RBP21.24■□□□□ 0.99
RTFDC1-204ENST00000449062 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
RTFDC1-204ENST00000449062 IQGAP1P46940 1657 aa21.19■□□□□ 0.98
RTFDC1-204ENST00000449062 ZFYVE9O95405 1425 aa21.19■□□□□ 0.98
RTFDC1-204ENST00000449062 TMEM131LA2VDJ0 1609 aa21.16■□□□□ 0.98
RTFDC1-204ENST00000449062 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
RTFDC1-204ENST00000449062 CPS1P31327 1500 aa21.15■□□□□ 0.98
RTFDC1-204ENST00000449062 RIMS2Q9UQ26 1411 aa21.13■□□□□ 0.97
RTFDC1-204ENST00000449062 CHGAP10645 457 aaKnown RBP21.13■□□□□ 0.97
RTFDC1-204ENST00000449062 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
RTFDC1-204ENST00000449062 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
RTFDC1-204ENST00000449062 SLC4A1APQ9BWU0 796 aaKnown RBP21.12■□□□□ 0.97
RTFDC1-204ENST00000449062 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.11■□□□□ 0.97
RTFDC1-204ENST00000449062 PLEKHG1Q9ULL1 1385 aa21.1■□□□□ 0.97
RTFDC1-204ENST00000449062 UBAP1LF5GYI3 381 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms