RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 TOMM22Q9NS69 142 aa7.65□□□□□ -1.18
PCDH15-219ENST00000448885 SMC4Q9NTJ3 1288 aa7.65□□□□□ -1.18
PCDH15-219ENST00000448885 TPM1P09493 284 aa7.65□□□□□ -1.18
PCDH15-219ENST00000448885 DDX11L8A8MPP1 907 aa7.65□□□□□ -1.19
PCDH15-219ENST00000448885 H3BQV1 296 aa7.65□□□□□ -1.19
PCDH15-219ENST00000448885 IFFO2Q5TF58 517 aa7.65□□□□□ -1.19
PCDH15-219ENST00000448885 SF3A1Q15459 793 aaKnown RBP7.64□□□□□ -1.19
PCDH15-219ENST00000448885 TCEAL9Q9UHQ7 104 aa7.64□□□□□ -1.19
PCDH15-219ENST00000448885 GPS2Q13227 327 aa7.64□□□□□ -1.19
PCDH15-219ENST00000448885 AMOTL1Q8IY63 956 aa7.64□□□□□ -1.19
PCDH15-219ENST00000448885 SLKQ9H2G2 1235 aaPredicted RBP7.64□□□□□ -1.19
PCDH15-219ENST00000448885 TERF2IPQ9NYB0 399 aa7.64□□□□□ -1.19
PCDH15-219ENST00000448885 FRAT2O75474 233 aaPredicted RBP7.64□□□□□ -1.19
PCDH15-219ENST00000448885 AKAP17AQ02040 695 aaKnown RBP7.63□□□□□ -1.19
PCDH15-219ENST00000448885 TRIM34Q9BYJ4 488 aa7.63□□□□□ -1.19
PCDH15-219ENST00000448885 CTDP1Q9Y5B0 961 aaPredicted RBP7.63□□□□□ -1.19
PCDH15-219ENST00000448885 CARMIL2Q6F5E8 1435 aa7.63□□□□□ -1.19
PCDH15-219ENST00000448885 PES1O00541 588 aaKnown RBP7.63□□□□□ -1.19
PCDH15-219ENST00000448885 GGT6Q6P531 493 aa7.63□□□□□ -1.19
PCDH15-219ENST00000448885 NOL8Q76FK4 1167 aaKnown RBP7.63□□□□□ -1.19
PCDH15-219ENST00000448885 EID1Q9Y6B2 187 aa7.63□□□□□ -1.19
PCDH15-219ENST00000448885 NOL10Q9BSC4 688 aaKnown RBP7.63□□□□□ -1.19
PCDH15-219ENST00000448885 ATAD2BQ9ULI0 1458 aa7.62□□□□□ -1.19
PCDH15-219ENST00000448885 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
PCDH15-219ENST00000448885 PKD2Q13563 968 aa7.62□□□□□ -1.19
PCDH15-219ENST00000448885 SLC4A10Q6U841 1118 aa7.62□□□□□ -1.19
PCDH15-219ENST00000448885 CCDC47Q96A33 483 aaKnown RBP7.62□□□□□ -1.19
PCDH15-219ENST00000448885 CENPJQ9HC77 1338 aaPredicted RBP7.62□□□□□ -1.19
PCDH15-219ENST00000448885 SYNE3Q6ZMZ3 975 aa7.62□□□□□ -1.19
PCDH15-219ENST00000448885 FAM184AQ8NB25 1140 aa7.62□□□□□ -1.19
PCDH15-219ENST00000448885 ATP6V1DQ9Y5K8 247 aa7.61□□□□□ -1.19
PCDH15-219ENST00000448885 ANKRD30AQ9BXX3 1397 aa7.61□□□□□ -1.19
PCDH15-219ENST00000448885 GTF2E1P29083 439 aaPredicted RBP7.61□□□□□ -1.19
PCDH15-219ENST00000448885 LRRFIP1Q32MZ4 808 aaKnown RBP7.61□□□□□ -1.19
PCDH15-219ENST00000448885 FOXD4L1Q9NU39 408 aa7.61□□□□□ -1.19
PCDH15-219ENST00000448885 PHLDB1Q86UU1 1377 aa7.61□□□□□ -1.19
PCDH15-219ENST00000448885 GOLGA6L19H0YKK7 550 aa7.61□□□□□ -1.19
PCDH15-219ENST00000448885 AMPHP49418 695 aa7.6□□□□□ -1.19
PCDH15-219ENST00000448885 SKOR2Q2VWA4 1001 aaPredicted RBP7.6□□□□□ -1.19
PCDH15-219ENST00000448885 CARMIL1Q5VZK9 1371 aa7.6□□□□□ -1.19
PCDH15-219ENST00000448885 CALRP27797 417 aaKnown RBP7.6□□□□□ -1.19
PCDH15-219ENST00000448885 TRIM29Q14134 588 aa7.6□□□□□ -1.19
PCDH15-219ENST00000448885 IPO9Q96P70 1041 aaKnown RBP7.6□□□□□ -1.19
PCDH15-219ENST00000448885 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
PCDH15-219ENST00000448885 NGDNQ8NEJ9 315 aaKnown RBP7.59□□□□□ -1.19
PCDH15-219ENST00000448885 ANKRD20A12PQ8NF67 263 aa7.59□□□□□ -1.19
PCDH15-219ENST00000448885 HOOK1Q9UJC3 728 aaKnown RBP7.59□□□□□ -1.19
PCDH15-219ENST00000448885 CUX2O14529 1486 aa7.59□□□□□ -1.19
PCDH15-219ENST00000448885 C1orf141Q5JVX7 400 aa7.59□□□□□ -1.2
PCDH15-219ENST00000448885 PATL2C9JE40 543 aaKnown RBP7.58□□□□□ -1.2
PCDH15-219ENST00000448885 PDE3BQ13370 1112 aa7.58□□□□□ -1.2
PCDH15-219ENST00000448885 CCAR2Q8N163 923 aaKnown RBP7.58□□□□□ -1.2
PCDH15-219ENST00000448885 BECN2A8MW95 431 aa7.58□□□□□ -1.2
PCDH15-219ENST00000448885 CFTRP13569 1480 aa7.58□□□□□ -1.2
PCDH15-219ENST00000448885 ANO8Q9HCE9 1232 aaPredicted RBP7.57□□□□□ -1.2
PCDH15-219ENST00000448885 FOXD4L5Q5VV16 416 aaPredicted RBP7.57□□□□□ -1.2
PCDH15-219ENST00000448885 FOXD4L4Q8WXT5 416 aaPredicted RBP7.57□□□□□ -1.2
PCDH15-219ENST00000448885 CECR2Q9BXF3 1484 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 CNKSR2Q8WXI2 1034 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 NUP155O75694 1391 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 CDR1P51861 262 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 TEX35Q5T0J7 233 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 CWC22Q9HCG8 908 aaKnown RBP7.57□□□□□ -1.2
PCDH15-219ENST00000448885 IPO7O95373 1038 aaKnown RBP7.57□□□□□ -1.2
PCDH15-219ENST00000448885 RRP12Q5JTH9 1297 aaKnown RBP7.57□□□□□ -1.2
PCDH15-219ENST00000448885 RILPL2Q969X0 211 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 UACAQ9BZF9 1416 aa7.57□□□□□ -1.2
PCDH15-219ENST00000448885 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.56□□□□□ -1.2
PCDH15-219ENST00000448885 KIF15Q9NS87 1388 aa7.56□□□□□ -1.2
PCDH15-219ENST00000448885 RUFY2Q8WXA3 655 aa7.56□□□□□ -1.2
PCDH15-219ENST00000448885 AK7Q96M32 723 aa7.56□□□□□ -1.2
PCDH15-219ENST00000448885 RSPH6AQ9H0K4 717 aa7.56□□□□□ -1.2
PCDH15-219ENST00000448885 EFCAB2Q5VUJ9 269 aa7.56□□□□□ -1.2
PCDH15-219ENST00000448885 DIAPH3Q9NSV4 1193 aa7.56□□□□□ -1.2
PCDH15-219ENST00000448885 CPLX2Q6PUV4 134 aaKnown RBP7.55□□□□□ -1.2
PCDH15-219ENST00000448885 MPHOSPH9Q99550 1183 aa7.55□□□□□ -1.2
PCDH15-219ENST00000448885 ANO2Q9NQ90 1003 aa7.55□□□□□ -1.2
PCDH15-219ENST00000448885 RAD21O60216 631 aa7.55□□□□□ -1.2
PCDH15-219ENST00000448885 MCTP1Q6DN14 999 aa7.55□□□□□ -1.2
PCDH15-219ENST00000448885 ZNF771Q7L3S4 317 aaPredicted RBP7.55□□□□□ -1.2
PCDH15-219ENST00000448885 TTC5Q8N0Z6 440 aa7.55□□□□□ -1.2
PCDH15-219ENST00000448885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■■■■■ 96.1
PCDH15-219ENST00000448885 CENPQQ7L2Z9 268 aaPredicted RBP7.55□□□□□ -1.2
PCDH15-219ENST00000448885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.55□□□□□ -1.2
PCDH15-219ENST00000448885 LTV1Q96GA3 475 aaPredicted RBP7.55□□□□□ -1.2
PCDH15-219ENST00000448885 CCDC43Q96MW1 224 aaKnown RBP7.55□□□□□ -1.2
PCDH15-219ENST00000448885 FMN1Q68DA7 1419 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 EVA1CP58658 441 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 HSP90AA2PQ14568 343 aaPredicted RBP7.54□□□□□ -1.2
PCDH15-219ENST00000448885 ROCK1Q13464 1354 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 ERICH2A1L162 156 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 MSH5O43196 834 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 RUFY1Q96T51 708 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 ACBD3Q9H3P7 528 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 NEXNQ0ZGT2 675 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 WWC1Q8IX03 1113 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 FBXO3Q9UK99 471 aa7.54□□□□□ -1.2
PCDH15-219ENST00000448885 THOC2Q8NI27 1593 aaKnown RBP7.54□□□□□ -1.2
PCDH15-219ENST00000448885 FBXW7Q969H0 707 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms