RNA–Protein interactions for RNA: ENST00000448638.5

VWA3B-207, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 2

Gene VWA3B, Length 2,516 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-207ENST00000448638 SYCP2Q9BX26 1530 aa23.66■■□□□ 1.38
VWA3B-207ENST00000448638 ARHGAP5Q13017 1502 aa23.65■■□□□ 1.38
VWA3B-207ENST00000448638 CARD11Q9BXL7 1154 aa23.64■■□□□ 1.38
VWA3B-207ENST00000448638 IQGAP3Q86VI3 1631 aa23.62■■□□□ 1.37
VWA3B-207ENST00000448638 E9PCH4 1651 aa23.62■■□□□ 1.37
VWA3B-207ENST00000448638 TRPM1Q7Z4N2 1603 aa23.61■■□□□ 1.37
VWA3B-207ENST00000448638 KTN1Q86UP2 1357 aaKnown RBP23.6■■□□□ 1.37
VWA3B-207ENST00000448638 LAMC1P11047 1609 aa23.59■■□□□ 1.37
VWA3B-207ENST00000448638 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.37
VWA3B-207ENST00000448638 PPP4R2Q9NY27 417 aa23.57■■□□□ 1.36
VWA3B-207ENST00000448638 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
VWA3B-207ENST00000448638 DUOX2Q9NRD8 1548 aa23.57■■□□□ 1.36
VWA3B-207ENST00000448638 RBM19Q9Y4C8 960 aaKnown RBP23.56■■□□□ 1.36
VWA3B-207ENST00000448638 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
VWA3B-207ENST00000448638 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
VWA3B-207ENST00000448638 SMG6Q86US8 1419 aaKnown RBP23.55■■□□□ 1.36
VWA3B-207ENST00000448638 ATP10AO60312 1499 aa23.53■■□□□ 1.36
VWA3B-207ENST00000448638 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
VWA3B-207ENST00000448638 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
VWA3B-207ENST00000448638 UHRF1BP1LA0JNW5 1464 aa23.52■■□□□ 1.36
VWA3B-207ENST00000448638 ST20-MTHFSA0A0A6YYL1 179 aa23.52■■□□□ 1.36
VWA3B-207ENST00000448638 ERBINQ96RT1 1412 aa23.52■■□□□ 1.36
VWA3B-207ENST00000448638 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
VWA3B-207ENST00000448638 GPRASP1Q5JY77 1395 aa23.51■■□□□ 1.35
VWA3B-207ENST00000448638 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
VWA3B-207ENST00000448638 PLA2R1Q13018 1463 aa23.51■■□□□ 1.35
VWA3B-207ENST00000448638 IRX6P78412 446 aaPredicted RBP23.51■■□□□ 1.35
VWA3B-207ENST00000448638 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
VWA3B-207ENST00000448638 PLCH2O75038 1416 aa23.49■■□□□ 1.35
VWA3B-207ENST00000448638 RALBP1Q15311 655 aa23.49■■□□□ 1.35
VWA3B-207ENST00000448638 BRD4O60885 1362 aaPredicted RBP23.48■■□□□ 1.35
VWA3B-207ENST00000448638 PNISRQ8TF01 805 aaKnown RBP23.47■■□□□ 1.35
VWA3B-207ENST00000448638 A2MP01023 1474 aa23.47■■□□□ 1.35
VWA3B-207ENST00000448638 CLASP1Q7Z460 1538 aa23.47■■□□□ 1.35
VWA3B-207ENST00000448638 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
VWA3B-207ENST00000448638 ABCC1P33527 1531 aa23.45■■□□□ 1.34
VWA3B-207ENST00000448638 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
VWA3B-207ENST00000448638 LRPPRCP42704 1394 aaKnown RBP23.44■■□□□ 1.34
VWA3B-207ENST00000448638 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
VWA3B-207ENST00000448638 TMC1Q8TDI8 760 aa23.43■■□□□ 1.34
VWA3B-207ENST00000448638 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
VWA3B-207ENST00000448638 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
VWA3B-207ENST00000448638 RNF123Q5XPI4 1314 aa23.41■■□□□ 1.34
VWA3B-207ENST00000448638 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
VWA3B-207ENST00000448638 SLC24A1O60721 1099 aa23.38■■□□□ 1.33
VWA3B-207ENST00000448638 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
VWA3B-207ENST00000448638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.33
VWA3B-207ENST00000448638 PARD3Q8TEW0 1356 aa23.36■■□□□ 1.33
VWA3B-207ENST00000448638 RTEL1-TNFRSF6BF6WH68 1400 aa23.36■■□□□ 1.33
VWA3B-207ENST00000448638 WASHC2CQ9Y4E1 1318 aa23.36■■□□□ 1.33
VWA3B-207ENST00000448638 FANCIQ9NVI1 1328 aa23.34■■□□□ 1.33
VWA3B-207ENST00000448638 RGL3Q3MIN7 710 aa23.34■■□□□ 1.33
VWA3B-207ENST00000448638 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
VWA3B-207ENST00000448638 CNGB1Q14028 1251 aaPredicted RBP23.32■■□□□ 1.32
VWA3B-207ENST00000448638 NLRP13Q86W25 1043 aa23.31■■□□□ 1.32
VWA3B-207ENST00000448638 TRAPPC8Q9Y2L5 1435 aa23.31■■□□□ 1.32
VWA3B-207ENST00000448638 DEPDC5O75140 1603 aa23.31■■□□□ 1.32
VWA3B-207ENST00000448638 ZMYM4Q5VZL5 1548 aa23.3■■□□□ 1.32
VWA3B-207ENST00000448638 INSRP06213 1382 aa23.3■■□□□ 1.32
VWA3B-207ENST00000448638 TESK2Q96S53 571 aa23.3■■□□□ 1.32
VWA3B-207ENST00000448638 ANO8Q9HCE9 1232 aaPredicted RBP23.3■■□□□ 1.32
VWA3B-207ENST00000448638 PER1O15534 1290 aaPredicted RBP23.29■■□□□ 1.32
VWA3B-207ENST00000448638 CEP152O94986 1710 aa23.29■■□□□ 1.32
VWA3B-207ENST00000448638 ZFYVE16Q7Z3T8 1539 aa23.29■■□□□ 1.32
VWA3B-207ENST00000448638 TRPM2O94759 1503 aa23.29■■□□□ 1.32
VWA3B-207ENST00000448638 STAC3Q96MF2 364 aa23.28■■□□□ 1.32
VWA3B-207ENST00000448638 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
VWA3B-207ENST00000448638 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
VWA3B-207ENST00000448638 SPHKAPQ2M3C7 1700 aa23.27■■□□□ 1.32
VWA3B-207ENST00000448638 IQGAP1P46940 1657 aa23.26■■□□□ 1.31
VWA3B-207ENST00000448638 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
VWA3B-207ENST00000448638 TET3O43151 1660 aa23.25■■□□□ 1.31
VWA3B-207ENST00000448638 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
VWA3B-207ENST00000448638 TMF1P82094 1093 aa23.24■■□□□ 1.31
VWA3B-207ENST00000448638 ABCA9Q8IUA7 1624 aa23.24■■□□□ 1.31
VWA3B-207ENST00000448638 PTPRTO14522 1441 aa23.24■■□□□ 1.31
VWA3B-207ENST00000448638 PDE3BQ13370 1112 aa23.22■■□□□ 1.31
VWA3B-207ENST00000448638 NEURL4Q96JN8 1562 aa23.22■■□□□ 1.31
VWA3B-207ENST00000448638 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
VWA3B-207ENST00000448638 VWDEQ8N2E2 1590 aa23.2■■□□□ 1.3
VWA3B-207ENST00000448638 WDR7Q9Y4E6 1490 aa23.2■■□□□ 1.3
VWA3B-207ENST00000448638 SCAPERQ9BY12 1400 aa23.19■■□□□ 1.3
VWA3B-207ENST00000448638 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
VWA3B-207ENST00000448638 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
VWA3B-207ENST00000448638 CLTCL1P53675 1640 aa23.18■■□□□ 1.3
VWA3B-207ENST00000448638 BLMP54132 1417 aaPredicted RBP23.15■■□□□ 1.3
VWA3B-207ENST00000448638 PANK3Q9H999 370 aa23.15■■□□□ 1.3
VWA3B-207ENST00000448638 KANK1Q14678 1352 aa23.14■■□□□ 1.3
VWA3B-207ENST00000448638 FANCAO15360 1455 aa23.13■■□□□ 1.29
VWA3B-207ENST00000448638 MSH5O43196 834 aa23.13■■□□□ 1.29
VWA3B-207ENST00000448638 UBE2Q2Q8WVN8 375 aa23.13■■□□□ 1.29
VWA3B-207ENST00000448638 CCDC136Q96JN2 1154 aa23.13■■□□□ 1.29
VWA3B-207ENST00000448638 SCAF11Q99590 1463 aaKnown RBP23.13■■□□□ 1.29
VWA3B-207ENST00000448638 SYNMO15061 1565 aa23.13■■□□□ 1.29
VWA3B-207ENST00000448638 AFAP1Q8N556 730 aa23.13■■□□□ 1.29
VWA3B-207ENST00000448638 CDCA8Q53HL2 280 aa23.11■■□□□ 1.29
VWA3B-207ENST00000448638 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
VWA3B-207ENST00000448638 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.28
VWA3B-207ENST00000448638 RCAN3Q9UKA8 241 aa23.07■■□□□ 1.28
VWA3B-207ENST00000448638 MROH1Q8NDA8 1641 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms