RNA–Protein interactions for RNA: ENST00000448395.6

KNSTRN-203, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2 BASIC

Gene KNSTRN, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-203ENST00000448395 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
KNSTRN-203ENST00000448395 UNC13BO14795 1591 aa17.27■□□□□ 0.36
KNSTRN-203ENST00000448395 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
KNSTRN-203ENST00000448395 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
KNSTRN-203ENST00000448395 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
KNSTRN-203ENST00000448395 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
KNSTRN-203ENST00000448395 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
KNSTRN-203ENST00000448395 NBPF8Q3BBV2 869 aa17.23■□□□□ 0.35
KNSTRN-203ENST00000448395 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
KNSTRN-203ENST00000448395 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
KNSTRN-203ENST00000448395 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
KNSTRN-203ENST00000448395 RTEL1-TNFRSF6BF6WH68 1400 aa17.21■□□□□ 0.35
KNSTRN-203ENST00000448395 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
KNSTRN-203ENST00000448395 TRAPPC8Q9Y2L5 1435 aa17.2■□□□□ 0.34
KNSTRN-203ENST00000448395 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
KNSTRN-203ENST00000448395 RIMS1Q86UR5 1692 aaKnown RBP17.2■□□□□ 0.34
KNSTRN-203ENST00000448395 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
KNSTRN-203ENST00000448395 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
KNSTRN-203ENST00000448395 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
KNSTRN-203ENST00000448395 FANCAO15360 1455 aa17.15■□□□□ 0.34
KNSTRN-203ENST00000448395 ZFYVE16Q7Z3T8 1539 aa17.14■□□□□ 0.33
KNSTRN-203ENST00000448395 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
KNSTRN-203ENST00000448395 CCER2I3L3R5 266 aa17.13■□□□□ 0.33
KNSTRN-203ENST00000448395 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
KNSTRN-203ENST00000448395 ATP10AO60312 1499 aa17.12■□□□□ 0.33
KNSTRN-203ENST00000448395 POLR1AO95602 1720 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-203ENST00000448395 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-203ENST00000448395 ANP32CO43423 234 aa17.12■□□□□ 0.33
KNSTRN-203ENST00000448395 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
KNSTRN-203ENST00000448395 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
KNSTRN-203ENST00000448395 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
KNSTRN-203ENST00000448395 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
KNSTRN-203ENST00000448395 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
KNSTRN-203ENST00000448395 ATP7AQ04656 1500 aa17.08■□□□□ 0.33
KNSTRN-203ENST00000448395 STRCQ7RTU9 1775 aa17.08■□□□□ 0.32
KNSTRN-203ENST00000448395 AFAP1Q8N556 730 aa17.08■□□□□ 0.32
KNSTRN-203ENST00000448395 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
KNSTRN-203ENST00000448395 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
KNSTRN-203ENST00000448395 CCDC144AA2RUR9 1427 aa17.07■□□□□ 0.32
KNSTRN-203ENST00000448395 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
KNSTRN-203ENST00000448395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■□□□ 12.2
KNSTRN-203ENST00000448395 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
KNSTRN-203ENST00000448395 C11orf95C9JLR9 678 aaPredicted RBP17.05■□□□□ 0.32
KNSTRN-203ENST00000448395 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
KNSTRN-203ENST00000448395 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
KNSTRN-203ENST00000448395 KDM5CP41229 1560 aa17.05■□□□□ 0.32
KNSTRN-203ENST00000448395 FRMPD1Q5SYB0 1578 aa17.05■□□□□ 0.32
KNSTRN-203ENST00000448395 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
KNSTRN-203ENST00000448395 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
KNSTRN-203ENST00000448395 EIF2AK4Q9P2K8 1649 aaKnown RBP17.04■□□□□ 0.32
KNSTRN-203ENST00000448395 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
KNSTRN-203ENST00000448395 USP47Q96K76 1375 aa17.02■□□□□ 0.32
KNSTRN-203ENST00000448395 LTBP4Q8N2S1 1624 aa17.02■□□□□ 0.32
KNSTRN-203ENST00000448395 ARHGEF40Q8TER5 1519 aa17.01■□□□□ 0.31
KNSTRN-203ENST00000448395 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
KNSTRN-203ENST00000448395 DHX29Q7Z478 1369 aaKnown RBP17.01■□□□□ 0.31
KNSTRN-203ENST00000448395 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
KNSTRN-203ENST00000448395 E9PCH4 1651 aa17■□□□□ 0.31
KNSTRN-203ENST00000448395 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
KNSTRN-203ENST00000448395 TET3O43151 1660 aa17■□□□□ 0.31
KNSTRN-203ENST00000448395 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
KNSTRN-203ENST00000448395 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
KNSTRN-203ENST00000448395 PRAG1Q86YV5 1406 aa16.99■□□□□ 0.31
KNSTRN-203ENST00000448395 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
KNSTRN-203ENST00000448395 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
KNSTRN-203ENST00000448395 A2MP01023 1474 aa16.98■□□□□ 0.31
KNSTRN-203ENST00000448395 PTPRTO14522 1441 aa16.98■□□□□ 0.31
KNSTRN-203ENST00000448395 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
KNSTRN-203ENST00000448395 TRPM2O94759 1503 aa16.96■□□□□ 0.31
KNSTRN-203ENST00000448395 PRDM15P57071 1507 aaPredicted RBP16.96■□□□□ 0.31
KNSTRN-203ENST00000448395 NEO1Q92859 1461 aa16.96■□□□□ 0.31
KNSTRN-203ENST00000448395 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
KNSTRN-203ENST00000448395 LAMC1P11047 1609 aa16.96■□□□□ 0.3
KNSTRN-203ENST00000448395 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.3
KNSTRN-203ENST00000448395 KANK1Q14678 1352 aa16.95■□□□□ 0.3
KNSTRN-203ENST00000448395 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
KNSTRN-203ENST00000448395 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
KNSTRN-203ENST00000448395 POGZQ7Z3K3 1410 aa16.95■□□□□ 0.3
KNSTRN-203ENST00000448395 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
KNSTRN-203ENST00000448395 SPHKAPQ2M3C7 1700 aa16.94■□□□□ 0.3
KNSTRN-203ENST00000448395 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
KNSTRN-203ENST00000448395 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
KNSTRN-203ENST00000448395 FER1L4A9Z1Z3 1794 aa16.93■□□□□ 0.3
KNSTRN-203ENST00000448395 CEP152O94986 1710 aa16.92■□□□□ 0.3
KNSTRN-203ENST00000448395 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
KNSTRN-203ENST00000448395 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
KNSTRN-203ENST00000448395 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
KNSTRN-203ENST00000448395 KIF3BO15066 747 aa16.91■□□□□ 0.3
KNSTRN-203ENST00000448395 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
KNSTRN-203ENST00000448395 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
KNSTRN-203ENST00000448395 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
KNSTRN-203ENST00000448395 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
KNSTRN-203ENST00000448395 PRKRIP1Q9H875 184 aaPredicted RBP16.88■□□□□ 0.29
KNSTRN-203ENST00000448395 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
KNSTRN-203ENST00000448395 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
KNSTRN-203ENST00000448395 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
KNSTRN-203ENST00000448395 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
KNSTRN-203ENST00000448395 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
KNSTRN-203ENST00000448395 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
KNSTRN-203ENST00000448395 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms