RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 C1orf141Q5JVX7 400 aa25.25■■□□□ 1.63
FGFR1-214ENST00000447712 SYTL4Q96C24 671 aaPredicted RBP25.25■■□□□ 1.63
FGFR1-214ENST00000447712 RAD21O60216 631 aa25.24■■□□□ 1.63
FGFR1-214ENST00000447712 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
FGFR1-214ENST00000447712 PHF23Q9BUL5 403 aaPredicted RBP25.22■■□□□ 1.63
FGFR1-214ENST00000447712 TIMELESSQ9UNS1 1208 aa25.21■■□□□ 1.63
FGFR1-214ENST00000447712 GZF1Q9H116 711 aaPredicted RBP25.21■■□□□ 1.63
FGFR1-214ENST00000447712 SLKQ9H2G2 1235 aaPredicted RBP25.21■■□□□ 1.63
FGFR1-214ENST00000447712 RRP7AQ9Y3A4 280 aaKnown RBP25.19■■□□□ 1.62
FGFR1-214ENST00000447712 TPM4P67936 248 aa25.19■■□□□ 1.62
FGFR1-214ENST00000447712 GBP4Q96PP9 640 aa25.19■■□□□ 1.62
FGFR1-214ENST00000447712 PMFBP1Q8TBY8 1022 aa25.18■■□□□ 1.62
FGFR1-214ENST00000447712 CCDC34Q96HJ3 373 aa25.18■■□□□ 1.62
FGFR1-214ENST00000447712 FOXD4L1Q9NU39 408 aa25.18■■□□□ 1.62
FGFR1-214ENST00000447712 ELL2O00472 640 aaPredicted RBP25.18■■□□□ 1.62
FGFR1-214ENST00000447712 FBXW7Q969H0 707 aa25.18■■□□□ 1.62
FGFR1-214ENST00000447712 CCER2I3L3R5 266 aa25.16■■□□□ 1.62
FGFR1-214ENST00000447712 FMN1Q68DA7 1419 aa25.16■■□□□ 1.62
FGFR1-214ENST00000447712 COG3Q96JB2 828 aa25.15■■□□□ 1.62
FGFR1-214ENST00000447712 TRIM34Q9BYJ4 488 aa25.15■■□□□ 1.62
FGFR1-214ENST00000447712 TTC5Q8N0Z6 440 aa25.14■■□□□ 1.62
FGFR1-214ENST00000447712 JPH4Q96JJ6 628 aa25.14■■□□□ 1.61
FGFR1-214ENST00000447712 WWC1Q8IX03 1113 aa25.13■■□□□ 1.61
FGFR1-214ENST00000447712 CTDP1Q9Y5B0 961 aaPredicted RBP25.13■■□□□ 1.61
FGFR1-214ENST00000447712 TEFQ10587 303 aa25.11■■□□□ 1.61
FGFR1-214ENST00000447712 CENPJQ9HC77 1338 aaPredicted RBP25.11■■□□□ 1.61
FGFR1-214ENST00000447712 EIF2S2P20042 333 aaKnown RBP25.11■■□□□ 1.61
FGFR1-214ENST00000447712 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
FGFR1-214ENST00000447712 MINK1Q8N4C8 1332 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-214ENST00000447712 FOXD4L5Q5VV16 416 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-214ENST00000447712 FOXD4L4Q8WXT5 416 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-214ENST00000447712 A0A0U1RQG5 324 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-214ENST00000447712 CEP89Q96ST8 783 aa25.09■■□□□ 1.61
FGFR1-214ENST00000447712 SYAP1Q96A49 352 aaPredicted RBP25.08■■□□□ 1.61
FGFR1-214ENST00000447712 NOL10Q9BSC4 688 aaKnown RBP25.08■■□□□ 1.61
FGFR1-214ENST00000447712 PSME1Q06323 249 aa25.08■■□□□ 1.61
FGFR1-214ENST00000447712 L3MBTL2Q969R5 705 aa25.08■■□□□ 1.61
FGFR1-214ENST00000447712 RILPL2Q969X0 211 aa25.08■■□□□ 1.61
FGFR1-214ENST00000447712 PES1O00541 588 aaKnown RBP25.07■■□□□ 1.6
FGFR1-214ENST00000447712 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
FGFR1-214ENST00000447712 TCEAL9Q9UHQ7 104 aa25.07■■□□□ 1.6
FGFR1-214ENST00000447712 SF3A1Q15459 793 aaKnown RBP25.07■■□□□ 1.6
FGFR1-214ENST00000447712 RSPH4AQ5TD94 716 aa25.07■■□□□ 1.6
FGFR1-214ENST00000447712 KIF16BQ96L93 1317 aa25.06■■□□□ 1.6
FGFR1-214ENST00000447712 NECTIN2Q92692 538 aa25.05■■□□□ 1.6
FGFR1-214ENST00000447712 VPS8Q8N3P4 1428 aa25.05■■□□□ 1.6
FGFR1-214ENST00000447712 FHOD3Q2V2M9 1422 aa25.05■■□□□ 1.6
FGFR1-214ENST00000447712 AKAP17AQ02040 695 aaKnown RBP25.03■■□□□ 1.6
FGFR1-214ENST00000447712 ARID3AQ99856 593 aa25.03■■□□□ 1.6
FGFR1-214ENST00000447712 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
FGFR1-214ENST00000447712 PTMSP20962 102 aa25.02■■□□□ 1.6
FGFR1-214ENST00000447712 AMOTL1Q8IY63 956 aa25.02■■□□□ 1.6
FGFR1-214ENST00000447712 CWC22Q9HCG8 908 aaKnown RBP25.02■■□□□ 1.6
FGFR1-214ENST00000447712 VPS37DQ86XT2 251 aa25.02■■□□□ 1.6
FGFR1-214ENST00000447712 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
FGFR1-214ENST00000447712 BCL2L13Q9BXK5 485 aa25.01■■□□□ 1.59
FGFR1-214ENST00000447712 NEXNQ0ZGT2 675 aa25.01■■□□□ 1.59
FGFR1-214ENST00000447712 KRI1Q8N9T8 703 aaKnown RBP25■■□□□ 1.59
FGFR1-214ENST00000447712 H3BQV1 296 aa25■■□□□ 1.59
FGFR1-214ENST00000447712 IFFO2Q5TF58 517 aa25■■□□□ 1.59
FGFR1-214ENST00000447712 OSCARQ8IYS5 282 aa25■■□□□ 1.59
FGFR1-214ENST00000447712 CSPP1Q1MSJ5 1256 aa25■■□□□ 1.59
FGFR1-214ENST00000447712 CCDC18Q5T9S5 1454 aa24.99■■□□□ 1.59
FGFR1-214ENST00000447712 SAMD1Q6SPF0 538 aaPredicted RBP24.99■■□□□ 1.59
FGFR1-214ENST00000447712 PANK3Q9H999 370 aa24.98■■□□□ 1.59
FGFR1-214ENST00000447712 DHX16O60231 1041 aaKnown RBP24.98■■□□□ 1.59
FGFR1-214ENST00000447712 C9orf78Q9NZ63 289 aaPredicted RBP24.98■■□□□ 1.59
FGFR1-214ENST00000447712 EVC2Q86UK5 1308 aa24.98■■□□□ 1.59
FGFR1-214ENST00000447712 TPD52L1Q16890 204 aaPredicted RBP24.97■■□□□ 1.59
FGFR1-214ENST00000447712 KIF3AQ9Y496 699 aa24.96■■□□□ 1.59
FGFR1-214ENST00000447712 FAM69CQ0P6D2 419 aa24.96■■□□□ 1.59
FGFR1-214ENST00000447712 NLRP13Q86W25 1043 aa24.96■■□□□ 1.59
FGFR1-214ENST00000447712 SYNE3Q6ZMZ3 975 aa24.96■■□□□ 1.59
FGFR1-214ENST00000447712 TCERG1O14776 1098 aaKnown RBP24.95■■□□□ 1.59
FGFR1-214ENST00000447712 APPP05067 770 aa24.95■■□□□ 1.59
FGFR1-214ENST00000447712 SMARCA2P51531 1590 aa24.95■■□□□ 1.59
FGFR1-214ENST00000447712 FAM184AQ8NB25 1140 aa24.95■■□□□ 1.58
FGFR1-214ENST00000447712 ATF3P18847 181 aa24.95■■□□□ 1.58
FGFR1-214ENST00000447712 CCDC144AA2RUR9 1427 aa24.95■■□□□ 1.58
FGFR1-214ENST00000447712 ST18O60284 1047 aa24.94■■□□□ 1.58
FGFR1-214ENST00000447712 CGNL1Q0VF96 1302 aa24.94■■□□□ 1.58
FGFR1-214ENST00000447712 CNKSR2Q8WXI2 1034 aa24.94■■□□□ 1.58
FGFR1-214ENST00000447712 ANKRD45Q5TZF3 282 aa24.93■■□□□ 1.58
FGFR1-214ENST00000447712 ST20-MTHFSA0A0A6YYL1 179 aa24.92■■□□□ 1.58
FGFR1-214ENST00000447712 TPM3P06753 285 aa24.92■■□□□ 1.58
FGFR1-214ENST00000447712 FOXD4L6Q3SYB3 417 aaPredicted RBP24.91■■□□□ 1.58
FGFR1-214ENST00000447712 FOXD4L3Q6VB84 417 aaPredicted RBP24.91■■□□□ 1.58
FGFR1-214ENST00000447712 DCAF8L1A6NGE4 600 aa24.9■■□□□ 1.58
FGFR1-214ENST00000447712 MCTP1Q6DN14 999 aa24.89■■□□□ 1.58
FGFR1-214ENST00000447712 PTPRGP23470 1445 aa24.89■■□□□ 1.58
FGFR1-214ENST00000447712 UACAQ9BZF9 1416 aa24.89■■□□□ 1.57
FGFR1-214ENST00000447712 RBM33Q96EV2 1170 aaKnown RBP24.88■■□□□ 1.57
FGFR1-214ENST00000447712 NUTM2GQ5VZR2 741 aa24.88■■□□□ 1.57
FGFR1-214ENST00000447712 DIAPH3Q9NSV4 1193 aa24.88■■□□□ 1.57
FGFR1-214ENST00000447712 RAPGEF2Q9Y4G8 1499 aa24.85■■□□□ 1.57
FGFR1-214ENST00000447712 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
FGFR1-214ENST00000447712 LRRFIP1Q32MZ4 808 aaKnown RBP24.85■■□□□ 1.57
FGFR1-214ENST00000447712 FBXO3Q9UK99 471 aa24.84■■□□□ 1.57
FGFR1-214ENST00000447712 DEKP35659 375 aaKnown RBP24.84■■□□□ 1.57
FGFR1-214ENST00000447712 IFIT2P09913 472 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms