RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 KDM2AQ9Y2K7 1162 aa20.91■□□□□ 0.94
CNOT3-204ENST00000447684 UHRF1BP1Q6BDS2 1440 aa20.91■□□□□ 0.94
CNOT3-204ENST00000447684 ST20-MTHFSA0A0A6YYL1 179 aa20.91■□□□□ 0.94
CNOT3-204ENST00000447684 E9PCH4 1651 aa20.9■□□□□ 0.94
CNOT3-204ENST00000447684 C8orf34Q49A92 452 aa20.9■□□□□ 0.94
CNOT3-204ENST00000447684 NLRP13Q86W25 1043 aa20.9■□□□□ 0.94
CNOT3-204ENST00000447684 RRAGDQ9NQL2 400 aaPredicted RBP20.9■□□□□ 0.94
CNOT3-204ENST00000447684 GLIPR1L2Q4G1C9 344 aa20.89■□□□□ 0.93
CNOT3-204ENST00000447684 ZNF644Q9H582 1327 aaPredicted RBP20.89■□□□□ 0.93
CNOT3-204ENST00000447684 ADGBQ8N7X0 1667 aa20.89■□□□□ 0.93
CNOT3-204ENST00000447684 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
CNOT3-204ENST00000447684 VSIG10Q8N0Z9 540 aa20.86■□□□□ 0.93
CNOT3-204ENST00000447684 NAP1L5Q96NT1 182 aaPredicted RBP20.86■□□□□ 0.93
CNOT3-204ENST00000447684 SLKQ9H2G2 1235 aaPredicted RBP20.85■□□□□ 0.93
CNOT3-204ENST00000447684 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
CNOT3-204ENST00000447684 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.93
CNOT3-204ENST00000447684 PKD2Q13563 968 aa20.83■□□□□ 0.93
CNOT3-204ENST00000447684 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.92
CNOT3-204ENST00000447684 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
CNOT3-204ENST00000447684 ADGRL2O95490 1459 aa20.81■□□□□ 0.92
CNOT3-204ENST00000447684 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
CNOT3-204ENST00000447684 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
CNOT3-204ENST00000447684 CROCC2H7BZ55 1655 aa20.8■□□□□ 0.92
CNOT3-204ENST00000447684 PARD3Q8TEW0 1356 aa20.78■□□□□ 0.92
CNOT3-204ENST00000447684 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
CNOT3-204ENST00000447684 ITSN2Q9NZM3 1697 aa20.77■□□□□ 0.92
CNOT3-204ENST00000447684 L1TD1Q5T7N2 865 aaKnown RBP20.77■□□□□ 0.92
CNOT3-204ENST00000447684 ZMYND15Q9H091 742 aa20.77■□□□□ 0.92
CNOT3-204ENST00000447684 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.92
CNOT3-204ENST00000447684 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
CNOT3-204ENST00000447684 KIAA0586Q9BVV6 1533 aa20.74■□□□□ 0.91
CNOT3-204ENST00000447684 RAPGEF6Q8TEU7 1601 aa20.73■□□□□ 0.91
CNOT3-204ENST00000447684 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
CNOT3-204ENST00000447684 INSRP06213 1382 aa20.73■□□□□ 0.91
CNOT3-204ENST00000447684 HSP90AA2PQ14568 343 aaPredicted RBP20.73■□□□□ 0.91
CNOT3-204ENST00000447684 GZF1Q9H116 711 aaPredicted RBP20.73■□□□□ 0.91
CNOT3-204ENST00000447684 BLMP54132 1417 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-204ENST00000447684 KIAA0556O60303 1618 aa20.72■□□□□ 0.91
CNOT3-204ENST00000447684 ZNF777Q9ULD5 760 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-204ENST00000447684 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
CNOT3-204ENST00000447684 HSP90AA1P07900 732 aaKnown RBP20.71■□□□□ 0.91
CNOT3-204ENST00000447684 BECN1Q14457 450 aa20.71■□□□□ 0.91
CNOT3-204ENST00000447684 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
CNOT3-204ENST00000447684 CFDP1Q9UEE9 299 aaPredicted RBP20.7■□□□□ 0.9
CNOT3-204ENST00000447684 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
CNOT3-204ENST00000447684 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
CNOT3-204ENST00000447684 CEP170Q5SW79 1584 aa20.69■□□□□ 0.9
CNOT3-204ENST00000447684 TROQ12816 1431 aaPredicted RBP20.69■□□□□ 0.9
CNOT3-204ENST00000447684 SPRYD3Q8NCJ5 442 aa20.68■□□□□ 0.9
CNOT3-204ENST00000447684 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
CNOT3-204ENST00000447684 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
CNOT3-204ENST00000447684 SEC24BO95487 1268 aa20.67■□□□□ 0.9
CNOT3-204ENST00000447684 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
CNOT3-204ENST00000447684 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
CNOT3-204ENST00000447684 KDM5DQ9BY66 1539 aa20.67■□□□□ 0.9
CNOT3-204ENST00000447684 PANK2Q9BZ23 570 aa20.66■□□□□ 0.9
CNOT3-204ENST00000447684 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
CNOT3-204ENST00000447684 GOLGA6L3A6NEY3 463 aa20.66■□□□□ 0.9
CNOT3-204ENST00000447684 ADCY10Q96PN6 1610 aa20.65■□□□□ 0.9
CNOT3-204ENST00000447684 XRCC6P12956 609 aaKnown RBP eCLIP20.65■□□□□ 0.9
CNOT3-204ENST00000447684 NUP155O75694 1391 aa20.65■□□□□ 0.9
CNOT3-204ENST00000447684 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
CNOT3-204ENST00000447684 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
CNOT3-204ENST00000447684 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
CNOT3-204ENST00000447684 USP19O94966 1318 aa20.62■□□□□ 0.89
CNOT3-204ENST00000447684 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
CNOT3-204ENST00000447684 PANK3Q9H999 370 aa20.62■□□□□ 0.89
CNOT3-204ENST00000447684 WDR43Q15061 677 aaKnown RBP eCLIP20.62■□□□□ 0.89
CNOT3-204ENST00000447684 GOLGA2Q08379 1002 aa20.6■□□□□ 0.89
CNOT3-204ENST00000447684 SHANK2Q9UPX8 1470 aa20.6■□□□□ 0.89
CNOT3-204ENST00000447684 IGHDP01880 384 aa20.59■□□□□ 0.89
CNOT3-204ENST00000447684 COL17A1Q9UMD9 1497 aaPredicted RBP20.58■□□□□ 0.89
CNOT3-204ENST00000447684 RRP9O43818 475 aaKnown RBP20.58■□□□□ 0.88
CNOT3-204ENST00000447684 RGL3Q3MIN7 710 aa20.58■□□□□ 0.88
CNOT3-204ENST00000447684 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.88
CNOT3-204ENST00000447684 CLCN1P35523 988 aa20.57■□□□□ 0.88
CNOT3-204ENST00000447684 BCAR3O75815 825 aa20.57■□□□□ 0.88
CNOT3-204ENST00000447684 CDC42BPAQ5VT25 1732 aa20.57■□□□□ 0.88
CNOT3-204ENST00000447684 PTPRGP23470 1445 aa20.57■□□□□ 0.88
CNOT3-204ENST00000447684 PRAG1Q86YV5 1406 aa20.56■□□□□ 0.88
CNOT3-204ENST00000447684 NBPF1Q3BBV0 1214 aa20.56■□□□□ 0.88
CNOT3-204ENST00000447684 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
CNOT3-204ENST00000447684 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
CNOT3-204ENST00000447684 CCDC146Q8IYE0 955 aa20.54■□□□□ 0.88
CNOT3-204ENST00000447684 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
CNOT3-204ENST00000447684 LAMC1P11047 1609 aa20.53■□□□□ 0.88
CNOT3-204ENST00000447684 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
CNOT3-204ENST00000447684 ANTXR1Q9H6X2 564 aa20.52■□□□□ 0.88
CNOT3-204ENST00000447684 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
CNOT3-204ENST00000447684 TBC1D2Q9BYX2 928 aa20.51■□□□□ 0.87
CNOT3-204ENST00000447684 PRDM15P57071 1507 aaPredicted RBP20.5■□□□□ 0.87
CNOT3-204ENST00000447684 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
CNOT3-204ENST00000447684 MCM4P33991 863 aa20.5■□□□□ 0.87
CNOT3-204ENST00000447684 COG6Q9Y2V7 657 aa20.48■□□□□ 0.87
CNOT3-204ENST00000447684 FSD2A1L4K1 749 aa20.48■□□□□ 0.87
CNOT3-204ENST00000447684 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
CNOT3-204ENST00000447684 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
CNOT3-204ENST00000447684 SLFN5Q08AF3 891 aa20.47■□□□□ 0.87
CNOT3-204ENST00000447684 SPINK5Q9NQ38 1064 aaPredicted RBP20.47■□□□□ 0.87
CNOT3-204ENST00000447684 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms