RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 ZNF326Q5BKZ1 582 aaKnown RBP27.29■■□□□ 1.96
FAM3A-215ENST00000447601 ATP10AO60312 1499 aa27.28■■□□□ 1.96
FAM3A-215ENST00000447601 PLA2R1Q13018 1463 aa27.28■■□□□ 1.96
FAM3A-215ENST00000447601 GTF3C3Q9Y5Q9 886 aa27.28■■□□□ 1.96
FAM3A-215ENST00000447601 CCDC7Q96M83 1385 aa27.28■■□□□ 1.96
FAM3A-215ENST00000447601 USP47Q96K76 1375 aa27.24■■□□□ 1.95
FAM3A-215ENST00000447601 CD109Q6YHK3 1445 aa27.24■■□□□ 1.95
FAM3A-215ENST00000447601 DCAF11Q8TEB1 546 aa27.23■■□□□ 1.95
FAM3A-215ENST00000447601 CNTLNQ9NXG0 1405 aa27.23■■□□□ 1.95
FAM3A-215ENST00000447601 CFAP74Q9C0B2 1584 aa27.23■■□□□ 1.95
FAM3A-215ENST00000447601 ZNF518AQ6AHZ1 1483 aa27.21■■□□□ 1.95
FAM3A-215ENST00000447601 C11orf95C9JLR9 678 aaPredicted RBP27.2■■□□□ 1.95
FAM3A-215ENST00000447601 DEPDC5O75140 1603 aa27.2■■□□□ 1.94
FAM3A-215ENST00000447601 DHX29Q7Z478 1369 aaKnown RBP27.2■■□□□ 1.94
FAM3A-215ENST00000447601 MYT1LQ9UL68 1186 aa27.19■■□□□ 1.94
FAM3A-215ENST00000447601 KDM2AQ9Y2K7 1162 aa27.19■■□□□ 1.94
FAM3A-215ENST00000447601 KDM5CP41229 1560 aa27.18■■□□□ 1.94
FAM3A-215ENST00000447601 KANK1Q14678 1352 aa27.17■■□□□ 1.94
FAM3A-215ENST00000447601 EIF2AK4Q9P2K8 1649 aaKnown RBP27.17■■□□□ 1.94
FAM3A-215ENST00000447601 KIF7Q2M1P5 1343 aa27.17■■□□□ 1.94
FAM3A-215ENST00000447601 CARD11Q9BXL7 1154 aa27.16■■□□□ 1.94
FAM3A-215ENST00000447601 PRAG1Q86YV5 1406 aa27.14■■□□□ 1.94
FAM3A-215ENST00000447601 POLR1AO95602 1720 aaPredicted RBP27.13■■□□□ 1.93
FAM3A-215ENST00000447601 POGZQ7Z3K3 1410 aa27.13■■□□□ 1.93
FAM3A-215ENST00000447601 ARID4BQ4LE39 1312 aaPredicted RBP27.13■■□□□ 1.93
FAM3A-215ENST00000447601 A2MP01023 1474 aa27.12■■□□□ 1.93
FAM3A-215ENST00000447601 VWDEQ8N2E2 1590 aa27.12■■□□□ 1.93
FAM3A-215ENST00000447601 KIF3BO15066 747 aa27.11■■□□□ 1.93
FAM3A-215ENST00000447601 RGL3Q3MIN7 710 aa27.1■■□□□ 1.93
FAM3A-215ENST00000447601 ROCK2O75116 1388 aaKnown RBP27.1■■□□□ 1.93
FAM3A-215ENST00000447601 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
FAM3A-215ENST00000447601 PTPRTO14522 1441 aa27.09■■□□□ 1.93
FAM3A-215ENST00000447601 TRPM2O94759 1503 aa27.08■■□□□ 1.93
FAM3A-215ENST00000447601 E9PCH4 1651 aa27.08■■□□□ 1.93
FAM3A-215ENST00000447601 TET3O43151 1660 aa27.08■■□□□ 1.93
FAM3A-215ENST00000447601 KIDINS220Q9ULH0 1771 aa27.08■■□□□ 1.93
FAM3A-215ENST00000447601 NEO1Q92859 1461 aa27.08■■□□□ 1.93
FAM3A-215ENST00000447601 MLH3Q9UHC1 1453 aa27.07■■□□□ 1.92
FAM3A-215ENST00000447601 TRPM1Q7Z4N2 1603 aa27.04■■□□□ 1.92
FAM3A-215ENST00000447601 MROH1Q8NDA8 1641 aa27.03■■□□□ 1.92
FAM3A-215ENST00000447601 GPRASP1Q5JY77 1395 aa27.03■■□□□ 1.92
FAM3A-215ENST00000447601 BCORL1Q5H9F3 1711 aa27.02■■□□□ 1.92
FAM3A-215ENST00000447601 HECW2Q9P2P5 1572 aa27.01■■□□□ 1.91
FAM3A-215ENST00000447601 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
FAM3A-215ENST00000447601 SPHKAPQ2M3C7 1700 aa26.99■■□□□ 1.91
FAM3A-215ENST00000447601 ST20-MTHFSA0A0A6YYL1 179 aa26.98■■□□□ 1.91
FAM3A-215ENST00000447601 LAMC1P11047 1609 aa26.97■■□□□ 1.91
FAM3A-215ENST00000447601 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
FAM3A-215ENST00000447601 LMTK2Q8IWU2 1503 aa26.97■■□□□ 1.91
FAM3A-215ENST00000447601 PRKRIP1Q9H875 184 aaPredicted RBP26.97■■□□□ 1.91
FAM3A-215ENST00000447601 RNF17Q9BXT8 1623 aaKnown RBP26.96■■□□□ 1.91
FAM3A-215ENST00000447601 RIMBP3CA6NJZ7 1639 aa26.95■■□□□ 1.9
FAM3A-215ENST00000447601 RIMBP3BA6NNM3 1639 aa26.95■■□□□ 1.9
FAM3A-215ENST00000447601 RIMBP3Q9UFD9 1639 aa26.95■■□□□ 1.9
FAM3A-215ENST00000447601 EFCAB6Q5THR3 1501 aa26.94■■□□□ 1.9
FAM3A-215ENST00000447601 GLI2P10070 1586 aa26.94■■□□□ 1.9
FAM3A-215ENST00000447601 CLTCL1P53675 1640 aa26.93■■□□□ 1.9
FAM3A-215ENST00000447601 MAP3K4Q9Y6R4 1608 aa26.93■■□□□ 1.9
FAM3A-215ENST00000447601 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
FAM3A-215ENST00000447601 CEP152O94986 1710 aa26.92■■□□□ 1.9
FAM3A-215ENST00000447601 NBPF1Q3BBV0 1214 aa26.92■■□□□ 1.9
FAM3A-215ENST00000447601 NEURL4Q96JN8 1562 aa26.91■■□□□ 1.9
FAM3A-215ENST00000447601 POLR3GLQ9BT43 218 aa26.91■■□□□ 1.9
FAM3A-215ENST00000447601 ABCA6Q8N139 1617 aa26.88■■□□□ 1.89
FAM3A-215ENST00000447601 RAPGEF3O95398 923 aa26.86■■□□□ 1.89
FAM3A-215ENST00000447601 PPRC1Q5VV67 1664 aaKnown RBP26.86■■□□□ 1.89
FAM3A-215ENST00000447601 MADDQ8WXG6 1647 aa26.85■■□□□ 1.89
FAM3A-215ENST00000447601 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
FAM3A-215ENST00000447601 GGT6Q6P531 493 aa26.8■■□□□ 1.88
FAM3A-215ENST00000447601 RICTORQ6R327 1708 aa26.79■■□□□ 1.88
FAM3A-215ENST00000447601 MRS2Q9HD23 443 aa26.78■■□□□ 1.88
FAM3A-215ENST00000447601 COL17A1Q9UMD9 1497 aaPredicted RBP26.78■■□□□ 1.88
FAM3A-215ENST00000447601 DIP2BQ9P265 1576 aa26.77■■□□□ 1.88
FAM3A-215ENST00000447601 FAM69CQ0P6D2 419 aa26.76■■□□□ 1.88
FAM3A-215ENST00000447601 TESK2Q96S53 571 aa26.76■■□□□ 1.88
FAM3A-215ENST00000447601 ABCC3O15438 1527 aa26.76■■□□□ 1.87
FAM3A-215ENST00000447601 UGGT1Q9NYU2 1555 aa26.76■■□□□ 1.87
FAM3A-215ENST00000447601 NPATQ14207 1427 aa26.76■■□□□ 1.87
FAM3A-215ENST00000447601 MYOM2P54296 1465 aa26.76■■□□□ 1.87
FAM3A-215ENST00000447601 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.87
FAM3A-215ENST00000447601 CCDC184Q52MB2 194 aa26.75■■□□□ 1.87
FAM3A-215ENST00000447601 HNRNPUQ00839 825 aaKnown RBP eCLIP26.73■■□□□ 1.87
FAM3A-215ENST00000447601 TMF1P82094 1093 aa26.72■■□□□ 1.87
FAM3A-215ENST00000447601 SCAF11Q99590 1463 aaKnown RBP26.71■■□□□ 1.87
FAM3A-215ENST00000447601 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
FAM3A-215ENST00000447601 ADGRB3O60242 1522 aa26.69■■□□□ 1.86
FAM3A-215ENST00000447601 ZMYM4Q5VZL5 1548 aa26.69■■□□□ 1.86
FAM3A-215ENST00000447601 KIF1BO60333 1816 aa26.69■■□□□ 1.86
FAM3A-215ENST00000447601 YEATS2Q9ULM3 1422 aa26.69■■□□□ 1.86
FAM3A-215ENST00000447601 KIAA1210Q9ULL0 1709 aa26.69■■□□□ 1.86
FAM3A-215ENST00000447601 DISP3Q9P2K9 1392 aa26.68■■□□□ 1.86
FAM3A-215ENST00000447601 IQGAP1P46940 1657 aa26.68■■□□□ 1.86
FAM3A-215ENST00000447601 EIF3AQ14152 1382 aaKnown RBP26.66■■□□□ 1.86
FAM3A-215ENST00000447601 CAMSAP1Q5T5Y3 1602 aa26.66■■□□□ 1.86
FAM3A-215ENST00000447601 ARHGAP31Q2M1Z3 1444 aa26.65■■□□□ 1.86
FAM3A-215ENST00000447601 FAM9BQ8IZU0 186 aa26.65■■□□□ 1.86
FAM3A-215ENST00000447601 NRXN1Q9ULB1 1477 aa26.64■■□□□ 1.85
FAM3A-215ENST00000447601 NOS1P29475 1434 aa26.64■■□□□ 1.85
FAM3A-215ENST00000447601 ZC3H13Q5T200 1668 aaKnown RBP26.63■■□□□ 1.85
FAM3A-215ENST00000447601 RALBP1Q15311 655 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms