RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 HSCBQ8IWL3 235 aa8.89□□□□□ -0.99
CDK12-202ENST00000447079 TIAM1Q13009 1591 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 NCOA2Q15596 1464 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 NRDCO43847 1150 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 CGNL1Q0VF96 1302 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 U2AF1L5P0DN76 240 aaPredicted RBP8.88□□□□□ -0.99
CDK12-202ENST00000447079 U2AF1Q01081 240 aaKnown RBP eCLIP8.88□□□□□ -0.99
CDK12-202ENST00000447079 SAFB2Q14151 953 aaKnown RBP eCLIP8.88□□□□□ -0.99
CDK12-202ENST00000447079 PMFBP1Q8TBY8 1022 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 MIA2Q96PC5 1412 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 BICRAQ9NZM4 1560 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 FOXD1Q16676 465 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 KIF14Q15058 1648 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 L3MBTL2Q969R5 705 aa8.88□□□□□ -0.99
CDK12-202ENST00000447079 RWDD1Q9H446 243 aaPredicted RBP8.88□□□□□ -0.99
CDK12-202ENST00000447079 TMX4Q9H1E5 349 aaPredicted RBP8.87□□□□□ -0.99
CDK12-202ENST00000447079 HMMRO75330 724 aa8.87□□□□□ -0.99
CDK12-202ENST00000447079 MYBBP1AQ9BQG0 1328 aaKnown RBP8.87□□□□□ -0.99
CDK12-202ENST00000447079 POLA1P09884 1462 aaPredicted RBP8.87□□□□□ -0.99
CDK12-202ENST00000447079 RCAN3Q9UKA8 241 aa8.86□□□□□ -0.99
CDK12-202ENST00000447079 ITSN2Q9NZM3 1697 aa8.86□□□□□ -0.99
CDK12-202ENST00000447079 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.994e-7■■■■□ 24
CDK12-202ENST00000447079 KIAA1211Q6ZU35 1233 aa8.86□□□□□ -0.99
CDK12-202ENST00000447079 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
CDK12-202ENST00000447079 NGDNQ8NEJ9 315 aaKnown RBP8.86□□□□□ -0.99
CDK12-202ENST00000447079 MSNP26038 577 aaKnown RBP8.86□□□□□ -0.99
CDK12-202ENST00000447079 DHX57Q6P158 1386 aaKnown RBP8.86□□□□□ -0.99
CDK12-202ENST00000447079 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
CDK12-202ENST00000447079 USP47Q96K76 1375 aa8.85□□□□□ -0.99
CDK12-202ENST00000447079 CHAF1AQ13111 956 aaPredicted RBP8.85□□□□□ -0.99
CDK12-202ENST00000447079 RSPH6AQ9H0K4 717 aa8.85□□□□□ -0.99
CDK12-202ENST00000447079 KIF21AQ7Z4S6 1674 aa8.85□□□□□ -0.99
CDK12-202ENST00000447079 RGS3P49796 1198 aa8.85□□□□□ -0.99
CDK12-202ENST00000447079 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
CDK12-202ENST00000447079 ABCA10Q8WWZ4 1543 aa8.84□□□□□ -0.99
CDK12-202ENST00000447079 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
CDK12-202ENST00000447079 AMPHP49418 695 aa8.84□□□□□ -1
CDK12-202ENST00000447079 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
CDK12-202ENST00000447079 SNAPC4Q5SXM2 1469 aa8.83□□□□□ -1
CDK12-202ENST00000447079 SOX12O15370 315 aa8.83□□□□□ -1
CDK12-202ENST00000447079 PRG4Q92954 1404 aaPredicted RBP8.83□□□□□ -1
CDK12-202ENST00000447079 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
CDK12-202ENST00000447079 GOLGA6L4A6NEF3 574 aa8.82□□□□□ -1
CDK12-202ENST00000447079 PRXQ9BXM0 1461 aa8.82□□□□□ -1
CDK12-202ENST00000447079 HFM1A2PYH4 1435 aa8.82□□□□□ -1
CDK12-202ENST00000447079 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
CDK12-202ENST00000447079 COG3Q96JB2 828 aa8.82□□□□□ -1
CDK12-202ENST00000447079 ITPRIPQ8IWB1 547 aa8.81□□□□□ -1
CDK12-202ENST00000447079 CENPJQ9HC77 1338 aaPredicted RBP8.81□□□□□ -1
CDK12-202ENST00000447079 ROCK1Q13464 1354 aa8.81□□□□□ -1
CDK12-202ENST00000447079 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
CDK12-202ENST00000447079 NESP48681 1621 aa8.81□□□□□ -1
CDK12-202ENST00000447079 SMC4Q9NTJ3 1288 aa8.8□□□□□ -1
CDK12-202ENST00000447079 MAP3K1Q13233 1512 aa8.8□□□□□ -1
CDK12-202ENST00000447079 TROQ12816 1431 aaPredicted RBP8.8□□□□□ -1
CDK12-202ENST00000447079 KIAA0586Q9BVV6 1533 aa8.8□□□□□ -1
CDK12-202ENST00000447079 HSP90AA2PQ14568 343 aaPredicted RBP8.8□□□□□ -1
CDK12-202ENST00000447079 USP35Q9P2H5 1018 aa8.8□□□□□ -1
CDK12-202ENST00000447079 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
CDK12-202ENST00000447079 CCDC34Q96HJ3 373 aa8.79□□□□□ -1
CDK12-202ENST00000447079 CYB5RLQ6IPT4 315 aa8.79□□□□□ -1
CDK12-202ENST00000447079 C9orf84Q5VXU9 1444 aa8.79□□□□□ -1
CDK12-202ENST00000447079 THOC2Q8NI27 1593 aaKnown RBP8.79□□□□□ -1
CDK12-202ENST00000447079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.79□□□□□ -1
CDK12-202ENST00000447079 ARAP1Q96P48 1450 aa8.79□□□□□ -1
CDK12-202ENST00000447079 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
CDK12-202ENST00000447079 GBP4Q96PP9 640 aa8.78□□□□□ -1
CDK12-202ENST00000447079 NAP1L2Q9ULW6 460 aaPredicted RBP8.78□□□□□ -1
CDK12-202ENST00000447079 PCF11O94913 1555 aaKnown RBP8.78□□□□□ -1
CDK12-202ENST00000447079 GNL2Q13823 731 aaKnown RBP8.78□□□□□ -1
CDK12-202ENST00000447079 E9PSI1 815 aa8.78□□□□□ -1
CDK12-202ENST00000447079 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
CDK12-202ENST00000447079 C1orf141Q5JVX7 400 aa8.78□□□□□ -1
CDK12-202ENST00000447079 TRAK1Q9UPV9 953 aa8.78□□□□□ -1
CDK12-202ENST00000447079 LRRFIP1Q32MZ4 808 aaKnown RBP8.78□□□□□ -1
CDK12-202ENST00000447079 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
CDK12-202ENST00000447079 SYAP1Q96A49 352 aaPredicted RBP8.78□□□□□ -1
CDK12-202ENST00000447079 ST20-MTHFSA0A0A6YYL1 179 aa8.77□□□□□ -1
CDK12-202ENST00000447079 TAF7LQ5H9L4 462 aa8.77□□□□□ -1.01
CDK12-202ENST00000447079 POGZQ7Z3K3 1410 aa8.77□□□□□ -1.01
CDK12-202ENST00000447079 ZBED9Q6R2W3 1325 aa8.77□□□□□ -1.01
CDK12-202ENST00000447079 GORABQ5T7V8 394 aa8.76□□□□□ -1.01
CDK12-202ENST00000447079 AAMPQ13685 434 aa8.76□□□□□ -1.01
CDK12-202ENST00000447079 CNTLNQ9NXG0 1405 aa8.76□□□□□ -1.01
CDK12-202ENST00000447079 IPO9Q96P70 1041 aaKnown RBP8.76□□□□□ -1.01
CDK12-202ENST00000447079 KIF3AQ9Y496 699 aa8.76□□□□□ -1.01
CDK12-202ENST00000447079 CCDC141Q6ZP82 1450 aa8.76□□□□□ -1.01
CDK12-202ENST00000447079 PANK3Q9H999 370 aa8.76□□□□□ -1.01
CDK12-202ENST00000447079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDK12-202ENST00000447079 EPRSP07814 1512 aaKnown RBP8.75□□□□□ -1.01
CDK12-202ENST00000447079 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
CDK12-202ENST00000447079 TNNT3P45378 269 aaPredicted RBP8.74□□□□□ -1.01
CDK12-202ENST00000447079 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
CDK12-202ENST00000447079 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
CDK12-202ENST00000447079 AMER1Q5JTC6 1135 aaPredicted RBP8.73□□□□□ -1.01
CDK12-202ENST00000447079 DAPK1P53355 1430 aa8.73□□□□□ -1.01
CDK12-202ENST00000447079 EVA1CP58658 441 aa8.73□□□□□ -1.01
CDK12-202ENST00000447079 CENPQQ7L2Z9 268 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms