RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 SMARCA4P51532 1647 aa11.07□□□□□ -0.64
MCF2L2-203ENST00000447025 ZNF500O60304 480 aaPredicted RBP11.06□□□□□ -0.64
MCF2L2-203ENST00000447025 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
MCF2L2-203ENST00000447025 MAP2K1Q02750 393 aaPredicted RBP11.06□□□□□ -0.64
MCF2L2-203ENST00000447025 TERF1P54274 439 aa11.06□□□□□ -0.64
MCF2L2-203ENST00000447025 BAZ1AQ9NRL2 1556 aaPredicted RBP11.06□□□□□ -0.64
MCF2L2-203ENST00000447025 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
MCF2L2-203ENST00000447025 EXOC8Q8IYI6 725 aa11.05□□□□□ -0.64
MCF2L2-203ENST00000447025 SGSM3Q96HU1 749 aa11.05□□□□□ -0.64
MCF2L2-203ENST00000447025 SATB1Q01826 763 aa11.04□□□□□ -0.64
MCF2L2-203ENST00000447025 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
MCF2L2-203ENST00000447025 TSHZ1Q6ZSZ6 1077 aa11.04□□□□□ -0.64
MCF2L2-203ENST00000447025 TERF2IPQ9NYB0 399 aa11.04□□□□□ -0.64
MCF2L2-203ENST00000447025 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
MCF2L2-203ENST00000447025 NBPF10Q6P3W6 841 aaKnown RBP11.04□□□□□ -0.64
MCF2L2-203ENST00000447025 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
MCF2L2-203ENST00000447025 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
MCF2L2-203ENST00000447025 RINLQ6ZS11 566 aa11.03□□□□□ -0.64
MCF2L2-203ENST00000447025 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
MCF2L2-203ENST00000447025 GOLIM4O00461 696 aa11.02□□□□□ -0.65
MCF2L2-203ENST00000447025 CHMP4CQ96CF2 233 aa11.02□□□□□ -0.65
MCF2L2-203ENST00000447025 PPP4R2Q9NY27 417 aa11.02□□□□□ -0.65
MCF2L2-203ENST00000447025 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
MCF2L2-203ENST00000447025 NBPF6Q5VWK0 638 aa11.01□□□□□ -0.65
MCF2L2-203ENST00000447025 NBPF5PQ86XG9 351 aaPredicted RBP11.01□□□□□ -0.65
MCF2L2-203ENST00000447025 NBPF4Q96M43 638 aa11.01□□□□□ -0.65
MCF2L2-203ENST00000447025 NFKBIBQ15653 356 aa11□□□□□ -0.65
MCF2L2-203ENST00000447025 RGL3Q3MIN7 710 aa11□□□□□ -0.65
MCF2L2-203ENST00000447025 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
MCF2L2-203ENST00000447025 SSR1P43307 286 aaKnown RBP10.99□□□□□ -0.65
MCF2L2-203ENST00000447025 RNF217Q8TC41 542 aa10.99□□□□□ -0.65
MCF2L2-203ENST00000447025 NCAPD3P42695 1498 aa10.98□□□□□ -0.65
MCF2L2-203ENST00000447025 RAD21O60216 631 aa10.97□□□□□ -0.65
MCF2L2-203ENST00000447025 ZKSCAN8Q15776 578 aaPredicted RBP10.97□□□□□ -0.65
MCF2L2-203ENST00000447025 EP400NLQ6ZTU2 488 aa10.97□□□□□ -0.65
MCF2L2-203ENST00000447025 RIPK4P57078 832 aa10.96□□□□□ -0.65
MCF2L2-203ENST00000447025 CEP83Q9Y592 693 aa10.96□□□□□ -0.65
MCF2L2-203ENST00000447025 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.66
MCF2L2-203ENST00000447025 LOC102724159A0A0B4J2E5 919 aa10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 PWP2Q15269 919 aaKnown RBP10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 FOXD4L6Q3SYB3 417 aaPredicted RBP10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 FOXD4L3Q6VB84 417 aaPredicted RBP10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 CCDC94Q9BW85 323 aaPredicted RBP10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 ATAD2BQ9ULI0 1458 aa10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 EFCC1Q9HA90 598 aa10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 STK26Q9P289 416 aa10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 CGNQ9P2M7 1197 aaKnown RBP10.95□□□□□ -0.66
MCF2L2-203ENST00000447025 ESPNB1AK53 854 aa10.94□□□□□ -0.66
MCF2L2-203ENST00000447025 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
MCF2L2-203ENST00000447025 SPTY2D1Q68D10 685 aaPredicted RBP10.94□□□□□ -0.66
MCF2L2-203ENST00000447025 ZNF513Q8N8E2 541 aaPredicted RBP10.94□□□□□ -0.66
MCF2L2-203ENST00000447025 MTMR7Q9Y216 660 aa10.94□□□□□ -0.66
MCF2L2-203ENST00000447025 ARMCX6Q7L4S7 300 aa10.93□□□□□ -0.66
MCF2L2-203ENST00000447025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.665e-9■■■■■ 167.7
MCF2L2-203ENST00000447025 MTA1Q13330 715 aa10.92□□□□□ -0.66
MCF2L2-203ENST00000447025 KIAA1211Q6ZU35 1233 aa10.92□□□□□ -0.66
MCF2L2-203ENST00000447025 KCTD17Q8N5Z5 321 aa10.92□□□□□ -0.66
MCF2L2-203ENST00000447025 RBM28Q9NW13 759 aaKnown RBP10.92□□□□□ -0.66
MCF2L2-203ENST00000447025 BORCS6Q96GS4 357 aa10.92□□□□□ -0.66
MCF2L2-203ENST00000447025 ANKRD23Q86SG2 305 aa10.91□□□□□ -0.66
MCF2L2-203ENST00000447025 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
MCF2L2-203ENST00000447025 NRDCO43847 1150 aa10.91□□□□□ -0.66
MCF2L2-203ENST00000447025 CT47A1Q5JQC4 288 aaPredicted RBP10.91□□□□□ -0.66
MCF2L2-203ENST00000447025 TSPAN18Q96SJ8 248 aa10.91□□□□□ -0.66
MCF2L2-203ENST00000447025 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 MYCBPQ99417 103 aaPredicted RBP10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 CCDC172P0C7W6 258 aa10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 MYBPC2Q14324 1141 aa10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 SETDB1Q15047 1291 aa10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 FOXD4L5Q5VV16 416 aaPredicted RBP10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 DNAJC14Q6Y2X3 702 aaPredicted RBP10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 FOXD4L4Q8WXT5 416 aaPredicted RBP10.9□□□□□ -0.66
MCF2L2-203ENST00000447025 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
MCF2L2-203ENST00000447025 MKL1Q969V6 931 aa10.89□□□□□ -0.67
MCF2L2-203ENST00000447025 FAM13BQ9NYF5 915 aa10.89□□□□□ -0.67
MCF2L2-203ENST00000447025 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
MCF2L2-203ENST00000447025 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
MCF2L2-203ENST00000447025 MRVI1Q9Y6F6 885 aa10.88□□□□□ -0.67
MCF2L2-203ENST00000447025 HDAC1Q13547 482 aaPredicted RBP10.88□□□□□ -0.67
MCF2L2-203ENST00000447025 SIRT1Q96EB6 747 aa10.88□□□□□ -0.67
MCF2L2-203ENST00000447025 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
MCF2L2-203ENST00000447025 RIPOR2Q9Y4F9 1068 aa10.88□□□□□ -0.67
MCF2L2-203ENST00000447025 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 POLD1P28340 1107 aa10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 KCNJ4P48050 445 aa10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 ITFG2Q969R8 447 aa10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 ZBTB9Q96C00 473 aa10.87□□□□□ -0.67
MCF2L2-203ENST00000447025 NCAPGQ9BPX3 1015 aa10.86□□□□□ -0.67
MCF2L2-203ENST00000447025 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
MCF2L2-203ENST00000447025 TULP2O00295 520 aa10.85□□□□□ -0.67
MCF2L2-203ENST00000447025 TOP2AP11388 1531 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-203ENST00000447025 SDR16C5Q8N3Y7 309 aa10.85□□□□□ -0.67
MCF2L2-203ENST00000447025 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
MCF2L2-203ENST00000447025 CCDC88BA6NC98 1476 aa10.84□□□□□ -0.67
MCF2L2-203ENST00000447025 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
MCF2L2-203ENST00000447025 TRIM34Q9BYJ4 488 aa10.84□□□□□ -0.67
MCF2L2-203ENST00000447025 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms