RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 LHX8Q68G74 356 aa9.86□□□□□ -0.83
HMGN1P36-201ENST00000446623 ECM2O94769 699 aaPredicted RBP9.85□□□□□ -0.83
HMGN1P36-201ENST00000446623 PKD2Q13563 968 aa9.85□□□□□ -0.83
HMGN1P36-201ENST00000446623 DENND4BO75064 1496 aaPredicted RBP9.85□□□□□ -0.83
HMGN1P36-201ENST00000446623 CFAP74Q9C0B2 1584 aa9.84□□□□□ -0.83
HMGN1P36-201ENST00000446623 FHOD3Q2V2M9 1422 aa9.84□□□□□ -0.83
HMGN1P36-201ENST00000446623 C7P10643 843 aa9.84□□□□□ -0.83
HMGN1P36-201ENST00000446623 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
HMGN1P36-201ENST00000446623 SIGLEC1Q9BZZ2 1709 aa9.84□□□□□ -0.83
HMGN1P36-201ENST00000446623 FANCAO15360 1455 aa9.84□□□□□ -0.83
HMGN1P36-201ENST00000446623 AKNAQ7Z591 1439 aa9.83□□□□□ -0.84
HMGN1P36-201ENST00000446623 PDAP1Q13442 181 aaKnown RBP9.83□□□□□ -0.84
HMGN1P36-201ENST00000446623 TTC37Q6PGP7 1564 aa9.83□□□□□ -0.84
HMGN1P36-201ENST00000446623 ZMYM4Q5VZL5 1548 aa9.82□□□□□ -0.84
HMGN1P36-201ENST00000446623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGN1P36-201ENST00000446623 PLEKHD1A6NEE1 506 aa9.82□□□□□ -0.84
HMGN1P36-201ENST00000446623 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
HMGN1P36-201ENST00000446623 ZFYVE16Q7Z3T8 1539 aa9.82□□□□□ -0.84
HMGN1P36-201ENST00000446623 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
HMGN1P36-201ENST00000446623 HSPA2P54652 639 aa9.81□□□□□ -0.84
HMGN1P36-201ENST00000446623 EFCAB5A4FU69 1503 aa9.81□□□□□ -0.84
HMGN1P36-201ENST00000446623 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
HMGN1P36-201ENST00000446623 YEATS2Q9ULM3 1422 aa9.81□□□□□ -0.84
HMGN1P36-201ENST00000446623 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
HMGN1P36-201ENST00000446623 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
HMGN1P36-201ENST00000446623 FER1L4A9Z1Z3 1794 aa9.79□□□□□ -0.84
HMGN1P36-201ENST00000446623 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
HMGN1P36-201ENST00000446623 SEC24BO95487 1268 aa9.79□□□□□ -0.84
HMGN1P36-201ENST00000446623 COLQQ9Y215 455 aaPredicted RBP9.79□□□□□ -0.84
HMGN1P36-201ENST00000446623 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
HMGN1P36-201ENST00000446623 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.84
HMGN1P36-201ENST00000446623 EEA1Q15075 1411 aa9.77□□□□□ -0.85
HMGN1P36-201ENST00000446623 RGL2O15211 777 aa9.77□□□□□ -0.85
HMGN1P36-201ENST00000446623 GOLGA2Q08379 1002 aa9.77□□□□□ -0.85
HMGN1P36-201ENST00000446623 MLECQ14165 292 aa9.77□□□□□ -0.85
HMGN1P36-201ENST00000446623 CERKQ8TCT0 537 aa9.76□□□□□ -0.85
HMGN1P36-201ENST00000446623 CABP2Q9NPB3 220 aa9.76□□□□□ -0.85
HMGN1P36-201ENST00000446623 PLCH2O75038 1416 aa9.75□□□□□ -0.85
HMGN1P36-201ENST00000446623 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
HMGN1P36-201ENST00000446623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
HMGN1P36-201ENST00000446623 IER5LQ5T953 404 aa9.75□□□□□ -0.85
HMGN1P36-201ENST00000446623 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
HMGN1P36-201ENST00000446623 ARHGEF12Q9NZN5 1544 aa9.75□□□□□ -0.85
HMGN1P36-201ENST00000446623 PREX1Q8TCU6 1659 aa9.74□□□□□ -0.85
HMGN1P36-201ENST00000446623 MYO5CQ9NQX4 1742 aa9.73□□□□□ -0.85
HMGN1P36-201ENST00000446623 ATP10AO60312 1499 aa9.73□□□□□ -0.85
HMGN1P36-201ENST00000446623 VGFO15240 615 aaPredicted RBP9.73□□□□□ -0.85
HMGN1P36-201ENST00000446623 MKRN3Q13064 507 aaKnown RBP9.73□□□□□ -0.85
HMGN1P36-201ENST00000446623 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
HMGN1P36-201ENST00000446623 POTEJP0CG39 1038 aa9.72□□□□□ -0.85
HMGN1P36-201ENST00000446623 KIF14Q15058 1648 aa9.71□□□□□ -0.85
HMGN1P36-201ENST00000446623 PLCG2P16885 1265 aa9.71□□□□□ -0.86
HMGN1P36-201ENST00000446623 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.86
HMGN1P36-201ENST00000446623 STRCQ7RTU9 1775 aa9.7□□□□□ -0.86
HMGN1P36-201ENST00000446623 CEBPAP49715 358 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P36-201ENST00000446623 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
HMGN1P36-201ENST00000446623 KDM5CP41229 1560 aa9.69□□□□□ -0.86
HMGN1P36-201ENST00000446623 ZNF518AQ6AHZ1 1483 aa9.69□□□□□ -0.86
HMGN1P36-201ENST00000446623 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
HMGN1P36-201ENST00000446623 DIP2CQ9Y2E4 1556 aa9.68□□□□□ -0.86
HMGN1P36-201ENST00000446623 FMN1Q68DA7 1419 aa9.68□□□□□ -0.86
HMGN1P36-201ENST00000446623 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
HMGN1P36-201ENST00000446623 OTUD5Q96G74 571 aa9.68□□□□□ -0.86
HMGN1P36-201ENST00000446623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.68□□□□□ -0.86
HMGN1P36-201ENST00000446623 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
HMGN1P36-201ENST00000446623 ARHGAP5Q13017 1502 aa9.67□□□□□ -0.86
HMGN1P36-201ENST00000446623 AFAP1Q8N556 730 aa9.67□□□□□ -0.86
HMGN1P36-201ENST00000446623 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
HMGN1P36-201ENST00000446623 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
HMGN1P36-201ENST00000446623 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
HMGN1P36-201ENST00000446623 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 TROQ12816 1431 aaPredicted RBP9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 UHRF1BP1Q6BDS2 1440 aa9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 STK24Q9Y6E0 443 aa9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 ABCA6Q8N139 1617 aa9.66□□□□□ -0.86
HMGN1P36-201ENST00000446623 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
HMGN1P36-201ENST00000446623 C3P01024 1663 aa9.65□□□□□ -0.86
HMGN1P36-201ENST00000446623 STK25O00506 426 aa9.65□□□□□ -0.86
HMGN1P36-201ENST00000446623 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
HMGN1P36-201ENST00000446623 CDC42BPBQ9Y5S2 1711 aa9.65□□□□□ -0.87
HMGN1P36-201ENST00000446623 UBTFP17480 764 aaKnown RBP9.64□□□□□ -0.87
HMGN1P36-201ENST00000446623 ILDR2Q71H61 639 aa9.64□□□□□ -0.87
HMGN1P36-201ENST00000446623 MYT1LQ9UL68 1186 aa9.64□□□□□ -0.87
HMGN1P36-201ENST00000446623 MLH3Q9UHC1 1453 aa9.64□□□□□ -0.87
HMGN1P36-201ENST00000446623 CLIP1P30622 1438 aa9.64□□□□□ -0.87
HMGN1P36-201ENST00000446623 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
HMGN1P36-201ENST00000446623 PTPRTO14522 1441 aa9.63□□□□□ -0.87
HMGN1P36-201ENST00000446623 PREX2Q70Z35 1606 aa9.63□□□□□ -0.87
HMGN1P36-201ENST00000446623 ABCC1P33527 1531 aa9.62□□□□□ -0.87
HMGN1P36-201ENST00000446623 AGLP35573 1532 aa9.62□□□□□ -0.87
HMGN1P36-201ENST00000446623 ITSN2Q9NZM3 1697 aa9.62□□□□□ -0.87
HMGN1P36-201ENST00000446623 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
HMGN1P36-201ENST00000446623 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
HMGN1P36-201ENST00000446623 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
HMGN1P36-201ENST00000446623 SOCS7O14512 581 aa9.61□□□□□ -0.87
HMGN1P36-201ENST00000446623 SPATA31D1Q6ZQQ2 1576 aa9.61□□□□□ -0.87
HMGN1P36-201ENST00000446623 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
HMGN1P36-201ENST00000446623 SCUBE2Q9NQ36 999 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms